mRNA_F-serratus_M_contig680.17857.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A6H5J809_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J809_9PHAE) HSP 1 Score: 276 bits (705), Expect = 1.460e-83 Identity = 156/241 (64.73%), Postives = 180/241 (74.69%), Query Frame = 3
Query: 369 TTRGRAVAVSLSTWIAGLTSASGWSHALDPVKKTQEWIRIWRQEEFDNNALGGGELASPEGGKTIQPVLALIPIVTLRLQFQEVEKYLEKPSTFSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEIDEATDYAKMALAARKKSRTM*HGSAP 1091
T+R RA+ + +++ + L A ALDPV+K QE +RI QEEFDN LASPEGGKT+QPVLAL+PI+TLRLQ EVE L+ P F AL IL+ QDFQKK+IKR FN YSDNIYYL SDRENKYLQGGATPSSRQTLQYLLRND+IDNVEALTAEI++LIRERE G E D DE DLR+YL KCK SFDKYLGM+ QNEIDEATD AK+ALA ++K G+AP
Sbjct: 77 TSRNRAIGLGVAS-LFSLAVAPTPGLALDPVRKVQEQLRIRAQEEFDNVEA----LASPEGGKTLQPVLALVPIITLRLQLDEVESNLKDPRLFGAALTILQAQDFQKKDIKRVFNAYSDNIYYLPDSDRENKYLQGGATPSSRQTLQYLLRNDVIDNVEALTAEISYLIREREV---GGEA---DTDEKDLRMYLGKCKQSFDKYLGMVLQNEIDEATDMAKVALANKRK------GNAP 300
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: D8LLI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI5_ECTSI) HSP 1 Score: 271 bits (692), Expect = 1.200e-82 Identity = 148/226 (65.49%), Postives = 171/226 (75.66%), Query Frame = 3
Query: 369 TTRGRAVAVSLSTWIAGLTSASGWSHALDPVKKTQEWIRIWRQEEFDNNALGGGELASPEGGKTIQPVLALIPIVTLRLQFQEVEKYLEKPSTFSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEIDEATDYAKMAL 1046
T+R RA+ + +++ + L A LDPV+K QE +RI QEEFDN LASPEGGKTIQPVLAL+PI+TLRLQ EVE L+ P F AL IL+ QDFQKK+IKR FN YSDNIYYL SDRENKYLQGGATPSSRQTLQYLLRND+IDNVEALTAEIA+LIRERE+ G + + D DE DLR+YL KCK FDKYLGM+ QNEIDEATD AK+ +
Sbjct: 10 TSRSRAIGLGMAS-LFSLAVAPTPGLGLDPVRKVQEQLRIRAQEEFDNVEA----LASPEGGKTIQPVLALVPIITLRLQLDEVENNLKDPRRFGAALTILQAQDFQKKDIKRVFNAYSDNIYYLPDSDRENKYLQGGATPSSRQTLQYLLRNDVIDNVEALTAEIAYLIRERESG--GEDGSEADTDEKDLRMYLGKCKQGFDKYLGMVLQNEIDEATDMAKLVV 228
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A835ZF78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF78_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.350e-35 Identity = 79/172 (45.93%), Postives = 109/172 (63.37%), Query Frame = 3
Query: 528 GELASPEGGKTIQPVLALIPIVTLRLQFQEVEKYLEKPST--FSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEIDEATDYAK 1037
GELA P G KT+ PVLAL+PIV LR+ VE +L+ +T + AL++L + + KEIKR FN YSDNIY GS R N YL GGA P+S++T QYLLRN+++ +V+ LTAE+A+L+R+ G D +DL YL+ K SFD YL + ++D A + A+
Sbjct: 1 GELADPTGRKTLSPVLALVPIVRLRMGLDLVESWLKLNTTEGWQRALEVLSSSAYSAKEIKRQFNRYSDNIYIEVGSARANAYLDGGAMPTSKETTQYLLRNEVLAHVDELTAELAYLLRDGGGVGGG--------DTADLYTYLSAAKKSFDDYLQLAPPLDLDGAAEVAR 164
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: B5Y3I0_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3I0_PHATC) HSP 1 Score: 115 bits (288), Expect = 4.750e-25 Identity = 76/191 (39.79%), Postives = 106/191 (55.50%), Query Frame = 3
Query: 474 EWIRIWRQEEFDNNALGGGELASPEG--GKTIQPVLALIPIVTLRLQFQEVEKY-LEKPSTFSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEIDEATDYAK 1037
E IRIW Q E D+ GG G GK L+PI+ + + EVE+ L +++ A +ILK + +QK E K+ FN YSDNIYY S DR N YL GGATP + Q+L YLLRNDI+ NVEAL +EI +L++E SE + DL +Y + +Y+G++ E+ +A + K
Sbjct: 88 EKIRIWEQAEADDLKYGGELERGDAGNKGKVEAYPRLLVPILQMANELDEVERICLGSRDSWAQAQNILKQKKYQKIEFKKQFNAYSDNIYY-SDPDRANLYLGGGATPKTEQSLAYLLRNDILTNVEALQSEIEYLLKEP------SESS------EDLVLYATTANRAMKRYMGIVPPGELVKARELIK 265
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A7S2IB95_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IB95_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.140e-24 Identity = 70/182 (38.46%), Postives = 100/182 (54.95%), Query Frame = 3
Query: 474 EWIRIWRQEEFDNNALGGGELASPEGGKTIQPVLALIPIVTLRLQFQEVEKYLEKPST--FSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEI 1013
E +RIW Q E DN + GG G+ L L+PI+ + + + P + A DIL +F+K K+ FN ++DNIYY S DR N YL GGATP + Q++ YLLRND++ NVEAL AEI +LI++++ AG+E+ L+ DL VY KYL ++ E+
Sbjct: 105 EKVRIWNQAEADNISYGGELAPGSIKGRAAYAKL-LVPILGIEKDLLAANELVRVPDGKGLTQANDILSKSEFEKISFKKIFNAFADNIYY-SDPDRANLYLGGGATPKNEQSIAYLLRNDVLTNVEALQAEITYLIKQKKNIEAGTEEG--PLETEDLYVYAQTAVDGMKKYLELVPPGEL 282
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A7S3Q034_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q034_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.540e-24 Identity = 73/194 (37.63%), Postives = 108/194 (55.67%), Query Frame = 3
Query: 459 VKKTQEWIRIWRQEEFDNNALGGGELA--SPEGGKTIQPVLALIPIVTLRLQFQEVEKYLEKPST--FSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEIDEATD 1028
K E IRI Q E DN GG ELA SP G Q L+PI+ ++ +F E++ + P+ + A IL + ++K + K+ FN ++DNIYY S DR N YL GGA P + Q++ YL+RND++ NVE L AE+ +LI+E KA +++ DL +Y+ CK KYL ++ E+ A +
Sbjct: 128 TNKVLEKIRILEQAEADNIQYGG-ELAPGSPIGRD--QYAKLLVPIMIIQKEFDELDTLVHMPNGDGLAQADIILSKKQYEKLQFKKTFNAFADNIYY-SDPDRANAYLGGGAVPKNEQSIAYLIRNDVLTNVENLQAEVTYLIKEI--------KAGNEMETEDLYLYVQTCKDGMVKYLDLVPPGEVKIAKE 309
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A1E7FHC2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHC2_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.840e-23 Identity = 81/207 (39.13%), Postives = 107/207 (51.69%), Query Frame = 3
Query: 450 LDPVKKTQEWIRIWRQEEFDNNALGGGELASPEGGK---TIQPVLALIPIVTLRLQFQEVEKYLE---------KPS--TFSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDES--DLRVYLAKCKTSFDKYLGMIYQNEIDEA 1022
L+PV E +RIW Q + DN GG A G K P L L+PI+ + + E+ + KPS S AL IL++ + K K+ FN Y DNIYY S DR N YL GGATP + Q++ YLLRNDI+ N+E L AE+ FLI K E+ +ES DL Y A ++ KYL ++ NE+ EA
Sbjct: 27 LNPVL---EQLRIWEQVDKDNMKYGGELEAGDAGNKGKVDAYPTL-LVPILKIDQELNEINTLVHSGDNNNNSNKPSKDAMSKALTILQSPTYDKITFKKTFNKYGDNIYY-SDPDRANAYLGGGATPKNEQSIAYLLRNDILTNMENLRAELEFLI-----------KTPEEENESVEDLYTYTAIVTSAMKKYLAIVPPNELKEA 217
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A7R9WN96_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN96_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.060e-23 Identity = 73/186 (39.25%), Postives = 103/186 (55.38%), Query Frame = 3
Query: 474 EWIRIWRQEEFDNNALGGGELASPEG--GKTIQPVLALIPIVTLRLQFQEVEKYLEKPSTFSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDE-SDLRVYLAKCKTSFDKYLGMIYQNEIDEA 1022
E IRIW Q E DN G A G GK L+PI+ + + +V+K + S + DAL I++ + ++K K+AFN Y DNIYY S DR N YL GGATP + Q+L YLLRND++ NVE L AE+ +L++ EK EDL + +D+ K KYL ++ E+++A
Sbjct: 149 EQIRIWEQAEADNIKYSGELEAGDAGNKGKVDAYPKLLMPILEIDYELTQVKKLVRDESRWPDALTIMQQKKYEKIPFKKAFNAYGDNIYY-SDPDRANVYLGGGATPKTEQSLAYLLRNDVLTNVENLRAELEYLMK-------SGEKETEDLYKFADIATNAMK------KYLAIVPPGELEQA 320
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: A0A6U3RMQ4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RMQ4_9STRA) HSP 1 Score: 109 bits (272), Expect = 9.110e-23 Identity = 68/200 (34.00%), Postives = 100/200 (50.00%), Query Frame = 3
Query: 441 SHALDPVKKTQ-------EWIRIWRQEEFDNNALGGGELASPEGGKTIQPVLALIPIVTLRLQFQEVEKYLEKPST--FSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEI 1013
+HA D + K E +RIW Q E D GG G+ L L+P++ + Q + +P+ A DIL F K K+ FN ++DNIYY S DR N YL GGATP + Q++ YLLRND++ N+EAL AE+ ++++++ K E L+ DL +Y C KYL ++ E+
Sbjct: 83 AHAKDELFKPNPLTNPVLEQVRIWNQAEADQLNYGGELAPGSSKGRAAYAKL-LVPVLEIERDLQTTNDLVRQPNGAGLEKANDILSKSQFVKINFKKVFNAFADNIYY-SDPDRANLYLGGGATPKNEQSIAYLLRNDVLTNLEALQAEVIYVMKQQ--------KGGEPLETEDLYLYAQSCVDGMTKYLELVPPGEL 272
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Match: B8CC65_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CC65_THAPS) HSP 1 Score: 103 bits (257), Expect = 5.640e-21 Identity = 75/194 (38.66%), Postives = 102/194 (52.58%), Query Frame = 3
Query: 474 EWIRIWRQEEFDNNALGGGELASPEGGKTI--QPVLALIPIVTLRLQFQEVEKYLEKP---------STFSDALDILKTQDFQKKEIKRAFNLYSDNIYYLSGSDRENKYLQGGATPSSRQTLQYLLRNDIIDNVEALTAEIAFLIREREAAAAGSEKAAEDLDESDLRVYLAKCKTSFDKYLGMIYQNEIDEA 1022
E +RIW Q+E DN GG ELAS T Q V L PI+T+ ++ L+K + F A I++ F K K+AFN ++DNIYY S DR N YL GGA P Q+L YLLRND++ NVE L AE+ +L++E AG + +LD DL + K KYL ++ E++ A
Sbjct: 68 EKLRIWNQDEADNIQYGG-ELASGSFKPTAFDQYVQLLQPILTVEQSIATIDGLLDKTKLNNKDDYVTAFKKADAIIEQPIFDKINFKKAFNAFADNIYY-SDPDRANLYLGGGAIPKPTQSLAYLLRNDVLTNVEDLRAELTYLMKELNRGGAG--EGGVELD--DLYSIVKMAKDGMVKYLDLVPPKELEAA 255 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig680.17857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig680.17857.1 >prot_F-serratus_M_contig680.17857.1 ID=prot_F-serratus_M_contig680.17857.1|Name=mRNA_F-serratus_M_contig680.17857.1|organism=Fucus serratus male|type=polypeptide|length=336bp MSAIGPRLSRTTLNLAVASLVVASVTCFGLPSSPCGCLRQQALLRYRHQSback to top mRNA from alignment at F-serratus_M_contig680:217572..221541+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig680.17857.1 ID=mRNA_F-serratus_M_contig680.17857.1|Name=mRNA_F-serratus_M_contig680.17857.1|organism=Fucus serratus male|type=mRNA|length=3970bp|location=Sequence derived from alignment at F-serratus_M_contig680:217572..221541+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig680:217572..221541+ >mRNA_F-serratus_M_contig680.17857.1 ID=mRNA_F-serratus_M_contig680.17857.1|Name=mRNA_F-serratus_M_contig680.17857.1|organism=Fucus serratus male|type=CDS|length=2016bp|location=Sequence derived from alignment at F-serratus_M_contig680:217572..221541+ (Fucus serratus male)back to top |