mRNA_F-serratus_M_contig1235.1785.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A6H5L4A0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4A0_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.220e-64 Identity = 103/152 (67.76%), Postives = 117/152 (76.97%), Query Frame = 1
Query: 1 AVAIAVATSLVALVSTPIQT-LAESLPPGTTPFNSICLGFGCGEFQGLDYGGAPAPTDEDSIPFKVFLESLDKGLVAKVDFENGGNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGYDLGKVETSKTLAK 453
AVA AVATS+ L + + AE LPPGT PF SIC+GFGCGEFQGLDY GAPAPTDEDSI FK FL+SLDKGL KVDF GG+KAY F+KP+ GE TRIRVGEGYP+EQ WSSPLWVVRAL DR VPY+ Y+LGK ++T+AK
Sbjct: 55 AVAAAVATSVAILSTASVPAAFAEELPPGTNPFTSICMGFGCGEFQGLDYPGAPAPTDEDSITFKSFLQSLDKGLDTKVDFLAGGDKAYAFVKPDAA-GEATRIRVGEGYPNEQGNSWSSPLWVVRALNDRNVPYHFEYNLGKGRATQTVAK 205
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: W7TQH3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQH3_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.410e-30 Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = 1
Query: 34 ALVSTPIQTLAESLPPGTTPFNSICLGFGCGEFQGLDYGGAPA-PTDEDSIPFKVFLESLDKGLVAKVDFENGGNKAYVFLKP---------EGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGYDL-GKVETSKTLA 450
AL S P+ AE T + S CLGFGCG + G DYGGAP T E +I FL+ +++ + KV+ GGN AY ++ P EG E R+R+GEG+P E K WSSPLW+VR L+D+++PY LG+D G + ++ L+
Sbjct: 100 ALYSAPMVVAAEQ-----TVWESTCLGFGCGSYNGPDYGGAPKLETGEKNIDMPSFLKLVEEKRIEKVELLEGGNVAYAYVAPRRGDKEGAGEGKEAGAERVRIGEGFPVENGKTWSSPLWMVRILKDKQIPYTLGFDFSGSDKVTRALS 244
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A7S2WW10_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW10_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.620e-27 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 1
Query: 67 ESLPPGTTPFNSICLGFGCGEFQGLDYGGAPAPTDEDSIPFKVFLESLDKGLVAKVDF-ENGGNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGY 414
+ L PFNS C+GFGC + +GL+YGGA P E+SIPF FLE L+ VA V+F G+ AY L+ + +RIR+GEG+P+E WSSPL+V+R L+++ VPY +
Sbjct: 87 QLLSDSVNPFNSACMGFGCSDARGLEYGGAAKPDSENSIPFSRFLELLEAKKVASVEFLPPSGDVAYATLE------DNSRIRIGEGFPEELPGAWSSPLYVMRILQNKGVPYTFAF 197
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A7S2G0Q6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0Q6_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.420e-27 Identity = 51/117 (43.59%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 67 ESLPPGTTPFNSICLGFGCGEFQGLDYGGAPAPTDEDSIPFKVFLESLDKGLVAKVDF-ENGGNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGY 414
+ L G PFNS C+GFGC + +GL YGGA AP +S+P+ FL+ ++ VA V+F G+ AY LK + RIR+GEG P+E+ GWSSP++V+R L ++ VPY +
Sbjct: 56 QLLKTGVNPFNSACMGFGCSDAKGLRYGGAEAPEGIESLPYSSFLKMVESKEVASVEFIPPSGDVAYAILKEDN-----KRIRIGEGMPEEKGNGWSSPMYVMRILDNKGVPYKFAF 167
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A8J2SCX3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SCX3_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.050e-25 Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 1
Query: 91 PFNSICLGFGCGEFQGLDYGGAPAPTDEDSIPFKVFLESLDKGLVAKVDFENGGNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVP 399
PFNS+CLGFGC QG+D GAPAPTDEDSIP+K LE ++ V V+F + + +G R RVGEGYP E + WSSPL+V R L + ++P
Sbjct: 45 PFNSMCLGFGCNSPQGVDSPGAPAPTDEDSIPWKQALELIEAKKVKSVEFNDVAMDKCWVVTSDG------RFRVGEGYPIEDGRSWSSPLFVTRILDNNQIP 141
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A7S0G3P3_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G3P3_9RHOD) HSP 1 Score: 82.0 bits (201), Expect = 4.990e-17 Identity = 49/113 (43.36%), Postives = 68/113 (60.18%), Query Frame = 1
Query: 115 FGCGEFQGLDYGGAPAPTDEDSIPFKVFLESLDKGLVAKVDFENG-GNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGYDLG-KVETSKTL 447
+ G + GLD GA A E+SI + FLE++ V +VDF G+ AY + GG+ RIRVGEG+P E+S+G+SSPLWV R L ++ +PY Y G K ET K++
Sbjct: 22 YAAGGYGGLDDKGALAVKGEESIDYMKFLEAVGDKKVERVDFYGPMGDIAYAVV---GGK----RIRVGEGFPVERSRGYSSPLWVARILDNKSIPYKFHYLEGAKYETMKSI 127
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A7S0YV26_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YV26_9CRYP) HSP 1 Score: 72.0 bits (175), Expect = 1.400e-13 Identity = 37/85 (43.53%), Postives = 51/85 (60.00%), Query Frame = 1
Query: 163 PTDEDSIPFKVFLESLDKGLVAKVDFEN-GGNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGY 414
PTDE+S+ FK F + L+ G V +VDF G+KAY K + +IR+GEG+P E SSPL+VV+ L D+ VPY +
Sbjct: 11 PTDEESVSFKEFFDGLNAGRVERVDFYGYSGDKAYATFK------DGKKIRIGEGFPVEIGNEASSPLFVVKLLGDKGVPYKFHF 89
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Match: A0A7S1EHC1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EHC1_HEMAN) HSP 1 Score: 73.2 bits (178), Expect = 2.510e-13 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 121 CGEFQGLDYGGAPAPTDEDSIPFKVFLESLDKGLVAKVDFEN-GGNKAYVFLKPEGGEGEPTRIRVGEGYPDEQSKGWSSPLWVVRALRDRKVPYNLGY 414
C ++ ++YG A PTDEDSI F F++ + G V +VDF G++AY K + RIR+GEG+P E SSPL+VVR L +++PY +
Sbjct: 70 CKQWCTVEYGQAK-PTDEDSISFNEFVQGVYGGTVDRVDFYGYSGDRAYATFK------DGKRIRIGEGFPIEVGNEASSPLFVVRLLGQKQIPYKFHF 161 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1235.1785.1 >prot_F-serratus_M_contig1235.1785.1 ID=prot_F-serratus_M_contig1235.1785.1|Name=mRNA_F-serratus_M_contig1235.1785.1|organism=Fucus serratus male|type=polypeptide|length=152bp AVAIAVATSLVALVSTPIQTLAESLPPGTTPFNSICLGFGCGEFQGLDYGback to top mRNA from alignment at F-serratus_M_contig1235:261491..266273- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1235.1785.1 ID=mRNA_F-serratus_M_contig1235.1785.1|Name=mRNA_F-serratus_M_contig1235.1785.1|organism=Fucus serratus male|type=mRNA|length=4783bp|location=Sequence derived from alignment at F-serratus_M_contig1235:261491..266273- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1235:261491..266273- >mRNA_F-serratus_M_contig1235.1785.1 ID=mRNA_F-serratus_M_contig1235.1785.1|Name=mRNA_F-serratus_M_contig1235.1785.1|organism=Fucus serratus male|type=CDS|length=912bp|location=Sequence derived from alignment at F-serratus_M_contig1235:261491..266273- (Fucus serratus male)back to top |