mRNA_F-serratus_M_contig1235.1784.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1235.1784.1
Unique NamemRNA_F-serratus_M_contig1235.1784.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: D7FVV1_ECTSI (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV1_ECTSI)

HSP 1 Score: 478 bits (1231), Expect = 6.100e-168
Identity = 236/283 (83.39%), Postives = 259/283 (91.52%), Query Frame = 1
Query:   46 RLRELLDGPDILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEGFEEVKRVVGFMDYEDTSAKYKLD 894
            +LR+LL  P+ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSG HGLPDTQ  L   A MLASATNIC+TLR IPCIGDGDTGYGN+VNV+RTVKGYAQVGMAGIMIEDQVAPKRCGH +GK+VVGREEAYSRVRAACDARDEG DI+++ARTDAR  LGLEEALERC+EFR+IGADITFLEAPQS+EEM+RYCQEVDGPKLANMLEFG TPILPP +L++MGY IAAYPLSLLSASIKAMN+ L RLK  EPLDDLLEGFEEV+RVVGF DY+ T+ KYK+D
Sbjct:   71 KLRDLLSRPEILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGAHGLPDTQ--LLSYAEMLASATNICATLRDIPCIGDGDTGYGNSVNVKRTVKGYAQVGMAGIMIEDQVAPKRCGHTKGKTVVGREEAYSRVRAACDARDEGADILIMARTDARAGLGLEEALERCKEFRKIGADITFLEAPQSEEEMRRYCQEVDGPKLANMLEFGKTPILPPVELEKMGYAIAAYPLSLLSASIKAMNSTLERLKAGEPLDDLLEGFEEVQRVVGFRDYDSTAEKYKID 351          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: W7TTL0_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTL0_9STRA)

HSP 1 Score: 370 bits (949), Expect = 4.810e-125
Identity = 189/283 (66.78%), Postives = 217/283 (76.68%), Query Frame = 1
Query:   46 RLRELLDGPDILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEGFEEVKRVVGFMDYEDTSAKYKLD 894
            +LR LL   DIL MPCCYDGLTARLVE  GFPLTFMTGFGVS   G PDTQ  L   A M+ +A  I   L  IPCIGDGDTGYGNAVNV+RTV GYAQ G+AGIMIEDQVAPK+CGH +GKS V REEA++RV+AA DAR+EG DI+++ARTDAR  LG++EA+ RC++FR IGADITFLEAP S+EEM+RYCQEV+GPKLANML+ G TP+LPPA+LQEMGY I AYPL+LLSA IKAM T L   K  +  + LL  FEE K VVGF  Y     K   D
Sbjct:   58 KLRNLLQQNDILIMPCCYDGLTARLVEQHGFPLTFMTGFGVSAARGHPDTQ--LLSYAEMVDNARQISEALHTIPCIGDGDTGYGNAVNVKRTVGGYAQAGLAGIMIEDQVAPKKCGHTKGKSCVSREEAFARVQAAVDARNEGADILIMARTDARAGLGMDEAIYRCQKFREIGADITFLEAPHSEEEMRRYCQEVEGPKLANMLQNGRTPVLPPAKLQEMGYTIVAYPLALLSAGIKAMRTVLTLAKDGKEFEHLLADFEETKAVVGFPAYYAAEEKAAAD 338          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A7S2SD78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD78_9STRA)

HSP 1 Score: 367 bits (942), Expect = 4.690e-124
Identity = 193/289 (66.78%), Postives = 224/289 (77.51%), Query Frame = 1
Query:   46 RLRELLDGP----DILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDE----GTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEGFEEVKRVVGFMDYEDTSAKYK 888
            RLRELLD       +L MPCCYDGLTARLVE+AGFPLTFMTGFGVS VHG+PDTQ  L     M A+A  I S+L+ IPCIGDGDTGYGN +NV+RTV GY QVG+AGIM+EDQV+PKRCGHV GKSVVGREEA  R+RAA  AR+E    G D+I+LARTDARG  G++EA+ERCR FR  GADITFLEAP+S EEM+ YC +V+GPKLANMLE G TPILPP +L EMGY IAAYPLSLL+ASI AM+ AL+RL   EPLDD+L  F   K  VGF +Y     +++
Sbjct:   62 RLRELLDAQPQSGSVLLMPCCYDGLTARLVENAGFPLTFMTGFGVSAVHGVPDTQ--LLSYGEMQAAARVITSSLQAIPCIGDGDTGYGNPMNVQRTVHGYHQVGLAGIMLEDQVSPKRCGHVAGKSVVGREEAVQRIRAAVLAREEIRAQGGDMIILARTDARGTDGMDEAIERCRRFREEGADITFLEAPESVEEMREYCDKVEGPKLANMLENGLTPILPPKELAEMGYTIAAYPLSLLAASIHAMDQALSRLALGEPLDDILCSFSRTKEAVGFSEYAKREEQFR 348          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A835ZB25_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB25_9STRA)

HSP 1 Score: 366 bits (940), Expect = 6.720e-124
Identity = 191/285 (67.02%), Postives = 219/285 (76.84%), Query Frame = 1
Query:   46 RLRELLDGPD----ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEGFEEVKRVVGFMDYEDTSAKYK 888
            +LRELL   +     L MPCCYDGLTARLVE  GFPLTFMTGFGVS  HG PDTQ  L   A M   A  I + L  IPCIGDGDTGYGNAVNV+RTV+GYAQ G+A IMIEDQV+PK+CGH RGK VVGR EA +RV+AACDARDEG DI++LARTDARG LG+ EALERC+EF+RIGADI FLEAP+S +EMQ++C EV GPKLANMLE G TPIL P +L  MG+ IAAYPL+LLSAS++AM  AL RLK  E  DDLL  F+EV+  VGF DY     +Y+
Sbjct:   55 KLRELLAEQERTGEALIMPCCYDGLTARLVEQGGFPLTFMTGFGVSASHGFPDTQ--LISYAEMQQRALEIIAALDSIPCIGDGDTGYGNAVNVKRTVRGYAQAGLAAIMIEDQVSPKKCGHTRGKDVVGRAEALARVQAACDARDEGADILILARTDARGPLGMREALERCQEFKRIGADIIFLEAPESVQEMQQFCDEVPGPKLANMLEHGKTPILSPKELGAMGFAIAAYPLTLLSASMRAMRFALQRLKAGESCDDLLLPFQEVQAGVGFPDYWAEEDRYR 337          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A0G4I971_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I971_9ALVE)

HSP 1 Score: 357 bits (916), Expect = 1.180e-120
Identity = 193/295 (65.42%), Postives = 222/295 (75.25%), Query Frame = 1
Query:   46 RLRELLDGPDILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRR-IPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDE--------GTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLD---DLLEGFEEVKRVVGFMDYEDTSAKYKLD 894
            RLR LL     L MPCCYDG+TARLVED GFPLTFMTGFGVS   G PD Q  L     ML+SAT I + LR+  PCI DGDTGYGNAVNV+RTV+GYAQVGMAG+MIEDQVAPKRCGH R K+VVG +EA +RVRAACDARDE        G DI V+ARTDA  AL  EEAL RCR FR  GADITFLEAP+S EEM+RYC+EV+GPKLANM+E G TP+LPP++LQ+MGY IAAYP+SLLSASI AM  AL ++   E L+   D+L  F +V R VGF DY +  A+YK +
Sbjct:   19 RLRALLSENKTLVMPCCYDGITARLVEDGGFPLTFMTGFGVSASRGFPDAQ--LVSFGEMLSSATTIVAALRKGTPCIADGDTGYGNAVNVKRTVRGYAQVGMAGVMIEDQVAPKRCGHTRVKAVVGFDEALARVRAACDARDEIRSAGLYGGNDICVMARTDANNALDFEEALRRCRAFREAGADITFLEAPKSIEEMKRYCEEVEGPKLANMVEGGKTPVLPPSELQKMGYSIAAYPVSLLSASIGAMRGALEKIHKGEKLEEGKDILP-FSDVCRQVGFEDYWEEEARYKTE 310          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A7S1XX81_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX81_9STRA)

HSP 1 Score: 355 bits (911), Expect = 1.050e-119
Identity = 195/300 (65.00%), Postives = 229/300 (76.33%), Query Frame = 1
Query:   46 RLRELLDGPD--ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRR--IPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDE-----GTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKT--EEP------LDDL-LEGFEEVKRVVGFMDYEDTSAKYKL 891
            RLR LL  P+  IL+MPCCYDGLTA+LV  AGFPLTFMTGFGVS   G PDT   L   A M ASA +I + LR   IPCIGDGDTGYGNA+NV+RTV+GYA  G+A IMIEDQVAPKRCGH +GKSV  REEA+SRV+AACDARDE       DI++LARTDARG LGL+EA+ERC++FR IGADITFLEAPQ+ EEM+RYC EV GPKLANMLE G TPIL PA+L ++G+ IAAYPL+LLSA+IKA   ALA LK   ++P      +DDL L+ FE V+ VVGF  Y D   +Y++
Sbjct:   26 RLRGLLSDPNRKILSMPCCYDGLTAKLVARAGFPLTFMTGFGVSAARGFPDTG--LVSYAEMEASARDITAALRPYGIPCIGDGDTGYGNAINVKRTVQGYAATGLAAIMIEDQVAPKRCGHTKGKSVTNREEAFSRVQAACDARDELVAQGANDILILARTDARGPLGLDEAIERCQKFREIGADITFLEAPQTVEEMRRYCTEVTGPKLANMLEQGKTPILSPAELADVGFSIAAYPLTLLSAAIKAQENALALLKATYDDPDTPTPSVDDLGLQTFENVQDVVGFPKYWDEEERYRI 323          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A0G4G948_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G948_VITBC)

HSP 1 Score: 354 bits (908), Expect = 1.110e-119
Identity = 172/280 (61.43%), Postives = 215/280 (76.79%), Query Frame = 1
Query:   46 RLRELLDGPDILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEGFEEVKRVVGFMDYEDTSAKY 885
            RLR LL+G DIL MPCCYD LTA+L+E+AGFPLTFM+GF VS   G PDTQ    +   M+ +  +IC+TL+  P IGDGD GYGN VNV+RTVKGYAQ G A +MIEDQVAPKRCGH +GK V+  E+A  +++AA DAR+EG DI++LARTDAR   GL+EA+ RC+ FRR+GADITFLEAPQ++EEM+RYC EVDGPKLANMLE G +PI+PP +LQ +G+KI AYPL+LLS+ IKAM  AL  LK  +P D  +  FE+++ +VGF DY     +Y
Sbjct:    8 RLRRLLEGADILVMPCCYDALTAKLIEEAGFPLTFMSGFSVSAARGFPDTQLISYQE--MVDTCASICATLKTTPLIGDGDNGYGNPVNVKRTVKGYAQAGAACVMIEDQVAPKRCGHTKGKDVISYEDACMKIQAAVDARNEGRDILILARTDARATHGLDEAIRRCQAFRRLGADITFLEAPQTEEEMRRYCTEVDGPKLANMLEGGKSPIIPPKELQAIGFKIVAYPLTLLSSGIKAMKNALDALKAGKPTDSYILPFEDLRAIVGFEDYYKEEERY 285          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A1V9ZZC3_9STRA (Carboxyvinyl-carboxyphosphonate phosphorylmutase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZC3_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.230e-115
Identity = 179/286 (62.59%), Postives = 219/286 (76.57%), Query Frame = 1
Query:   46 RLRELLDGPD-ILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDE-GTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEG---FEEVKRVVGFMDYEDTSAKYK 888
            ++R+LL  PD  + +PCCYDGLTARL+E AGF  TFMTGFGVS VHG PDTQ  L     M+ASA  ICS+L+ IPCIGDGDTGYGNAVNV+RTVKGY Q G+AGIM+EDQV PKRCGH +GK VV REEAY R++AA DAR E G DI+++ARTDAR    LEEA+ RC+EF+R+GADITFLEAP+S EEMQR C+EV G K+ANM+E G TPILP  QL +MGY++ AYPL++L ASI+AMNTAL  LK      +L++    F+++K  VGF +Y     KY+
Sbjct:    7 QIRQLLSRPDRSVVLPCCYDGLTARLIERAGFECTFMTGFGVSAVHGFPDTQ--LISYEEMVASARRICSSLQSIPCIGDGDTGYGNAVNVKRTVKGYIQAGLAGIMLEDQVMPKRCGHTKGKQVVSREEAYIRIQAAVDARRESGQDIVIIARTDARATHSLEEAIARCQEFQRLGADITFLEAPRSIEEMQRVCKEVPGWKMANMVEHGVTPILPINQLHDMGYQLIAYPLTILGASIQAMNTALKHLKELGHTPELVQSLATFDQIKADVGFDEYYAEEEKYR 290          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: A0A813KL40_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KL40_POLGL)

HSP 1 Score: 344 bits (883), Expect = 3.210e-115
Identity = 181/282 (64.18%), Postives = 210/282 (74.47%), Query Frame = 1
Query:   46 RLRELLDG-PDILTMPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGTDIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLEGFEEVKRVVGFMDYEDTSAKYK 888
            RLR LL     ILTMPC YD LTARLVE  GF +TFMTGFGVS  HG PD Q    +   M+ +A +IC +L+RI CIGDGDTGYGNAVNV+RTV+GYAQ GMA IMIEDQVAPKRCGH RGKSVV REEA +R+RAACDARDEG DI +LARTDAR   GLEEA+ RC+ F   GADITFLEAP S++EM+RYC+EV GPKL NML  G TP+L   +L+EMG+ +AAYPL+LLSA +KA   AL RL+  +   DL   FE +K VVGF DY     +YK
Sbjct:   60 RLRSLLQTRKGILTMPCAYDALTARLVERMGFEITFMTGFGVSAAHGYPDCQLVSYQE--MVDTAFHICGSLQRICCIGDGDTGYGNAVNVKRTVRGYAQAGMAAIMIEDQVAPKRCGHTRGKSVVSREEAIARIRAACDARDEGQDICILARTDARATEGLEEAIARCKAFVEAGADITFLEAPLSEDEMERYCREVPGPKLVNMLPSGKTPMLSLGRLEEMGFALAAYPLTLLSAGLKAQEEALTRLRDGKTTWDLELDFETLKDVVGFTDYYKEEDRYK 339          
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Match: D0P0N1_PHYIT (Carboxyvinyl-carboxyphosphonate phosphorylmutase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0P0N1_PHYIT)

HSP 1 Score: 340 bits (872), Expect = 2.240e-114
Identity = 176/285 (61.75%), Postives = 214/285 (75.09%), Query Frame = 1
Query:   85 MPCCYDGLTARLVEDAGFPLTFMTGFGVSGVHGLPDTQARLRRRA*MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIEDQVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGT-DIIVLARTDARGALGLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFGDTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEE----------------PLDDLLEGFEEVKRVVGFMDYEDTSAKYK 888
            MPCC+DGL+A+L+E AGF + FMTGFGVS VHGLPDTQ  L     M+ SA+ +C +LR +PCIGDGDTGYGNA+NV+RTV+ YAQ GMAGIM+EDQVAPKRCGH  GK+VV REEA++RVRAA DAR EG  DI+++ARTDARG   L+EA+ RC EF R+GADITFLEAPQS +EM++YC+EV GPK+ANM+E G TP+L P QL E+GYK+AAYP++LLSASIKAM  AL  LK +                  L+ LL  F  VK VVGF +Y    A+YK
Sbjct:    1 MPCCFDGLSAKLIERAGFDVAFMTGFGVSAVHGLPDTQ--LLSFGEMVRSASTVCESLRNVPCIGDGDTGYGNAINVKRTVRAYAQAGMAGIMLEDQVAPKRCGHTAGKAVVTREEAFARVRAAVDARTEGQLDIVIMARTDARGTHSLDEAIARCNEFARLGADITFLEAPQSVDEMKQYCREVPGPKMANMVENGLTPVLLPEQLGEVGYKLAAYPITLLSASIKAMEDALRLLKCQTGGEKQEDTGNNATPNAELNKLLCDFAHVKDVVGFTEYYAEEARYK 283          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV1_ECTSI6.100e-16883.39Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
W7TTL0_9STRA4.810e-12566.78Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
A0A7S2SD78_9STRA4.690e-12466.78Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A835ZB25_9STRA6.720e-12467.02Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
A0A0G4I971_9ALVE1.180e-12065.42Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1XX81_9STRA1.050e-11965.00Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A0G4G948_VITBC1.110e-11961.43Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A1V9ZZC3_9STRA1.230e-11562.59Carboxyvinyl-carboxyphosphonate phosphorylmutase n... [more]
A0A813KL40_POLGL3.210e-11564.18Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
D0P0N1_PHYIT2.240e-11461.75Carboxyvinyl-carboxyphosphonate phosphorylmutase, ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1235contigF-serratus_M_contig1235:255322..260713 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.6
Seed ortholog evalue5e-106
Seed eggNOG ortholog2880.D7FVV1
KEGG rclassRC00286,RC00287
KEGG koko:K03417
KEGG ReactionR00409
KEGG Pathwayko00640,map00640
Hectar predicted targeting categoryother localisation
EggNOG free text desc.isocitrate lyase activity
EggNOG OGsCOG2513@1,KOG1260@2759
EC4.1.3.30
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size897
Cds size675
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929155.560764-UTR-F-serratus_M_contig1235:255321..2554701622929155.560764-UTR-F-serratus_M_contig1235:255321..255470Fucus serratus maleUTRF-serratus_M_contig1235 255322..255470 +
1690962727.1100986-UTR-F-serratus_M_contig1235:255321..2554701690962727.1100986-UTR-F-serratus_M_contig1235:255321..255470Fucus serratus maleUTRF-serratus_M_contig1235 255322..255470 +
1622929155.5732577-UTR-F-serratus_M_contig1235:258968..2590391622929155.5732577-UTR-F-serratus_M_contig1235:258968..259039Fucus serratus maleUTRF-serratus_M_contig1235 258969..259039 +
1690962727.1227787-UTR-F-serratus_M_contig1235:258968..2590391690962727.1227787-UTR-F-serratus_M_contig1235:258968..259039Fucus serratus maleUTRF-serratus_M_contig1235 258969..259039 +
1622929155.5858762-UTR-F-serratus_M_contig1235:259394..2593961622929155.5858762-UTR-F-serratus_M_contig1235:259394..259396Fucus serratus maleUTRF-serratus_M_contig1235 259395..259396 +
1690962727.1302323-UTR-F-serratus_M_contig1235:259394..2593961690962727.1302323-UTR-F-serratus_M_contig1235:259394..259396Fucus serratus maleUTRF-serratus_M_contig1235 259395..259396 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929155.619254-CDS-F-serratus_M_contig1235:259396..2595161622929155.619254-CDS-F-serratus_M_contig1235:259396..259516Fucus serratus maleCDSF-serratus_M_contig1235 259397..259516 +
1690962727.1375492-CDS-F-serratus_M_contig1235:259396..2595161690962727.1375492-CDS-F-serratus_M_contig1235:259396..259516Fucus serratus maleCDSF-serratus_M_contig1235 259397..259516 +
1622929155.638647-CDS-F-serratus_M_contig1235:259683..2598081622929155.638647-CDS-F-serratus_M_contig1235:259683..259808Fucus serratus maleCDSF-serratus_M_contig1235 259684..259808 +
1690962727.1497993-CDS-F-serratus_M_contig1235:259683..2598081690962727.1497993-CDS-F-serratus_M_contig1235:259683..259808Fucus serratus maleCDSF-serratus_M_contig1235 259684..259808 +
1622929155.648711-CDS-F-serratus_M_contig1235:259961..2601601622929155.648711-CDS-F-serratus_M_contig1235:259961..260160Fucus serratus maleCDSF-serratus_M_contig1235 259962..260160 +
1690962727.1659813-CDS-F-serratus_M_contig1235:259961..2601601690962727.1659813-CDS-F-serratus_M_contig1235:259961..260160Fucus serratus maleCDSF-serratus_M_contig1235 259962..260160 +
1622929155.6590652-CDS-F-serratus_M_contig1235:260482..2607131622929155.6590652-CDS-F-serratus_M_contig1235:260482..260713Fucus serratus maleCDSF-serratus_M_contig1235 260483..260713 +
1690962727.1772246-CDS-F-serratus_M_contig1235:260482..2607131690962727.1772246-CDS-F-serratus_M_contig1235:260482..260713Fucus serratus maleCDSF-serratus_M_contig1235 260483..260713 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1235.1784.1prot_F-serratus_M_contig1235.1784.1Fucus serratus malepolypeptideF-serratus_M_contig1235 259397..260713 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1235.1784.1

>prot_F-serratus_M_contig1235.1784.1 ID=prot_F-serratus_M_contig1235.1784.1|Name=mRNA_F-serratus_M_contig1235.1784.1|organism=Fucus serratus male|type=polypeptide|length=225bp
MLASATNICSTLRRIPCIGDGDTGYGNAVNVRRTVKGYAQVGMAGIMIED
QVAPKRCGHVRGKSVVGREEAYSRVRAACDARDEGTDIIVLARTDARGAL
GLEEALERCREFRRIGADITFLEAPQSKEEMQRYCQEVDGPKLANMLEFG
DTPILPPAQLQEMGYKIAAYPLSLLSASIKAMNTALARLKTEEPLDDLLE
GFEEVKRVVGFMDYEDTSAKYKLD*
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mRNA from alignment at F-serratus_M_contig1235:255322..260713+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1235.1784.1 ID=mRNA_F-serratus_M_contig1235.1784.1|Name=mRNA_F-serratus_M_contig1235.1784.1|organism=Fucus serratus male|type=mRNA|length=5392bp|location=Sequence derived from alignment at F-serratus_M_contig1235:255322..260713+ (Fucus serratus male)
GCAAGCACCAGCTCAAGCTCGAGCGCCAGCGCAAGCGCCAGCGCTAGACT ACGTGAACTACTCGATGGTCCAGATATCCTAACCATGCCGTGCTGCTACG ATGGGTTAACTGCTCGGTTGGTGGAGGACGCGGGTTTTCCGTTGACGTTG TGAGTCTCATTTTTTTCGTTGGCGACATTACACTACAGTATCTACTGCTG TGTATTGTACAAATCGAAATGTTTGTTGTAATTAATAGTTTGGAACGCCG GAAGTTTTTAATGTATGTTTGTATGTATTACCATGGTATGTATTTGTATG TACGAAATGGCTGTTTGCCCCACCGGTGGGACATTCCAAAATTTACCCCA CCACCTGGATCTCGCGTCAGAAGACACGGTTGGTCACAGTACTGTACATG CATGAGTGTGTTTAAAGAAAAATCGGCGCGTCGTAGGGCTATCATGGGGT CTATCGTGCAGCCCAAACGGTCCTGTCTACGTGCTGTTACGGCCGGTGGG GTGGTTGATGTTTTCTGGTATGTATGGCTATTACACCAACCACCCCACCG GCCGTGGCAGCACATAGACAGGACCGTTTGGGCTGCACGATAGACCTCAT GATAGCTAACCCTAACCCTAACACACCCATGCATACACTGTGACCAACCA AGTCTTCTGACGCGAGATCCAGGTGGGGGGGTAAACAAGAGAATAGCCCA CCGGTGGGGCAAATAGCCATACCGTTGTATGTATGTATATTTTTAAATTG CAGATAACCGCGCAATCCGGCCCTGTCATCCTAGTCATTCTATGACACTC GTATTGGTCCTCCCTAGGGGGGATCAATGAAACTTATGTGTACCAGTATG TATGTATGTATGTATGCATGTATGTATGAATGTATGTAATGTCTGTGTTT TCTTCCCATTCATTCTGGACACCAAGTTCGTTGGACGTACCAGCCGGATG TATGTTATGTATGTATGTATGTATGTATGTATGTATGTAGGTTGTCTGTG TGTATGTAAGAATAGATAGATAGATGAATGGTATGTATGTATGTATGTAT GCATGTATTATGTATGATCATCACATATAGCAGAGTATGGATCAACCGGG TAAGGTTGCCAATCCTGCTCGTGGTAATTTTTTTTCTTTTTTCTTTTTCT TCTTTAATCTCACTTATAGCCGATGGACCATGTTACCATCCTGCCTGTGG TCACTAAGGATCTTCCCATCTCTCCCCGGTCCACGCCTTACGATTTTTTA CCGCGATGCAAGTTCAGCAATCTTACAACTCGTCAACTAATGGTTGAATT TTACTTACTCGCGTTCCCACGCTTTCCGTTACGGGAGAAAGAACACAAAT CCTGCTTTGGTGAGAATCGAACTCACGACTTCCGCACTAGCAGGTGTGCA GGCTACCTACTAGACCACTCGGGCGACGAGGGCTATGAACAGGGAAAATG AAAACCCCCCTGTCCCCGTACGCGCCTGAGAATTTGATCTCGCGAGATGA GTTTTGCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCCGATGC TTAACTCACGGGATTCCTCCCGATTTCCGCGGCGGCGTCCATTTATTTAT TCAAACCGCAATACGCCATCGGGTAAGTCCCGAGTTTATCGCGTCACGCA ATTGCTTACCGATGGCGCTCACGGTCGAGAGTCCGCCGCGGCACAGGGCC AGTAAACCTCAAGGTATTTCCAAACGGATGCTGCCTTGGCAGGTCACCAT GGACCAATAAGTATGCGCCTGTCTTTCCCACACCCACTATTGGTACCACG TGGGCATATTGATAGAATGGCGGGTATGTATGTTTGTATAGTCATCACAT ATAGCAGAGTATGGATCAACCGGGGTAAGATTGCCAATCCTGTCCGTGGT CAGCTGAACAGGGAAAACTGATATTTTCCTGTCCTCGTTCGCGCCTGAGA ATTTGGTCTCGCGAGACGGGTTCGGCAATCCCGTCCCGCGTCAGCCTGCT CATTCTCCATACTCAGGCTGAATCCGGTGCTTACTTGCGGGATTCGTCCC GATTTCCGCGGCGGCGTCCATTTATTTATTTTAAACCGCCATACGCCATC GGGCCAGTCCCGAGTTCATCGGATCACGCAATTGCGTACCGATGGCGTTC ACTGCCGAGAGTCCGCCGCGGCACAGGGCCAGTAAACCTCAAGGTATTTC CAAACGGATGCTGCCTTGGCAGGTCACCATGGACCAATTAGTATGCGCCT GTCTTTCCCACACCCACCATTGGCATGAAGTGGGCACGTTGAAAGGCTGT CTGTTCATACATCCTGATAATAGGTGTAAGTTATCTCGGGTTGGCAACCA ATGCGCTGAATGTGGGAAACAACGACAATTTTCCCCCCTGTCTGGGGGAT GCTCAGAGGGTTCAGCAGATGTTGTCAAATTTTTCTTCAAACAAAAATAA CAGCATGGATCAAGCGGGCAAGGTTGCCAGTCCTGCTCGTGGTCAACTGA ACAGGGAAAATGAATATTTCCCAACGGGGACCTTTGGTCTCGCGAGACGT GTTCGGCCGTCCCGTAACGCGCCAGCCCGCTCAGTCTCCGCACCCAGGCT GTATCTGGTGCTTACAAACGGGATTCCTCCCGATTTCCGCGGCGGCGTTC ATTTATTTATACCGCCATCCGCCATCGGGTCAGTCCCGAGTTTATCAGGT CACGCAATTGCGTACCGATGACGCTCACTACCAAGAGTCCGCCCCCACAG GGCCAGTGGTCCTCAAGGTAGTTCCAATAACGGGTGCTGCCTTTTCAGGT ATCTCCATGGACCAATCAATGTACGCCCCTCTTTTCCCACGCCCACTATA CTAATATTGGTATGAAGTGGTTACATTAGTAGCATGTGCGATACAGAAAA TGTCGGAGGCGTTATATAAGGGTGGATTTCTCGCCGATATTTTGCTCTGT TGACCCTGTGACTTAAAATCGGGGAGAACCCGGCTTAACCCCATGAACTG TACGAGGTACAACAGGTTGTGTTGTGCACTACTGTGGCAGCCGATGTTCC CAACCAATCGTATCGTTTCGACGCGATTCCCGCCGACAGTAGTGAGGATG CTCGGAAGGTTTGGGTACGTTGGTTCAGATAATTTTCAATAACAAAAATC TCGTGGGATTTGTCGCGTTCTCCGATGGCACAGTAGTAGCCACGATGCTT ACGTACTCGTCCAGTGTACAGTATATACAGTGCCAACAGCGATCTAGAAC TACTGTGGTGTACGAATCTAATAAGTGAAGTAAATAGAGTTCGAAGTCCT CTCTGTTCGGCCGAGTACAACAAACGGGATTCATCAAAAGAGATGATACC TTATTCAGCTGCAGTGCTGTTTGTACAAAATCTTACAGCTCAAGGACTGG TAGGTGTCATCACACTGCGAGTACGAATACCCTGCCTGAACTGCTTTTTG ATTTGTATGTATTGTACTGGTATTATTTCTTTTACCGCCACTCTGTTGCT TTAGCACAGCTTGTAATATAAAGTTGATATGTATAGTATGTACCATACAC CGGAGTACTCGATCGATTGGAACACATCGTTGTTGGTTGCCGTCCAAAAC TGAATCCATGCTTGTAACTTTCCTTCGTTTGTTTCTTGTGCCGGCAGCAT GACAGGCTTCGGCGTGTCTGGGGTTCATGGACTGCCAGATACTCAGGCGA GACTACGTCGAAGGGCGTGTTCGTAGCGCTCAGATACGTCAGCGCGATCA TGGCATTGCAATAAAAAGCATTCCATTCCCACAGTACTCGTAGCTGTAGC ACTTTTGTTTTTCAACGTTTCAAGCTTTTTGCTTCCGCACCAGGTAGGTC GAAATCGAGCGGGGCCGCCAGCTCAAAAACGATACTGCCAGATATAATTC AATAGTATTTAATAGATGGTCTGAGACGCTATACTACCACAGCACGCCCT TATTGTTTGCACTAGTTTGACCAGTACAGCCAAATGCCCGACTGGGATCC CGGGTTCACGTAAACCACCATAGCTTGTACAAACGTAAACCACGCTTTCG CTTGCAGTTGCTCTCGTACGCAGAGATGCTGGCCTCTGCCACTAACATCT GCTCGACGTTACGAAGGATCCCTTGCATCGGGGATGGAGACACGGGCTAC GGGAACGCCGTCAACGTAAGGCGGACGGTCAAGGGCTACGCGCAAGTGAG ATATACCGTAGCTCTAAACTAGCTCTACGGGTAGAAATGGCTCTTCAAAG GTTTGAAACGCTTTGCTTGGAAGGACCTGCGCACGGAAACTAAATCAAAA TCTCGTTATAACCCTATAACCATCTCATCGGTTTGTGGCCCTGTTCCCTT TCCCGGGGAAAGGTGGGGATGGCGGGCATCATGATTGAGGATCAAGTAGC GCCGAAACGCTGTGGACACGTCCGAGGAAAAAGCGTCGTGGGGAGGGAAG AGGCCTACAGTCGCGTCAGGGCGGCCTGCGACGCAAGGTACCGGTGTATC GATAATCTTCCATCGCTTCCCTCAAGGATTGCCGATGATTCTTCGTTTTA TTTGCAGCAGTAGTGCTTCACCGAGCCGGCTGATATGTTCCCCATCCATG CCTCTCGGATTTCAATTGAACCCGCCACCTCTTTTCGTAGGGACGAAGGA ACCGACATCATTGTCCTGGCGCGCACAGATGCAAGGGGAGCCTTAGGCCT TGAGGAGGCGCTGGAGCGATGTCGGGAGTTCAGACGAATCGGCGCAGACA TCACTTTCTTAGAAGCTCCGCAGAGCAAGGAAGAGATGCAACGGTACTGT CAAGAGGTTGACGGTCCTAAGCTCGCCAATATGCTCGAGGTAGATACCTT GCGACACCGTTGGCAAGATTTCCAGCGCTCTTTGGTGAAAACAGCTATAA TCTAGACTACACAGTAGCCGAGGTGTGGGCTCCACTCGACCCGAATAACT GAAACCCTCGTTGTCTTGTCACGCGGACGATCGTTACACACCCGATGGAT AGGTTTTAGAGTACTGTGTAGATGAAGGTTGCGCAGCGCTGTGTTGAACC TTGTTTGCTTGTGTCCGGTCCCACCGCGCATTGATGTCGCCACCTAACAA GCCCCACGACGTATTTTTCTCCCTACAAGTATCCCCTCCACGACGCTGTG CCGGTACGCAGTTTGGGGACACCCCGATCCTGCCGCCTGCGCAGCTCCAA GAGATGGGATACAAGATCGCGGCGTACCCGCTGAGCCTTCTGAGCGCCAG CATCAAAGCTATGAACACCGCGCTAGCGAGGCTCAAGACTGAGGAACCCC TGGACGACTTGCTGGAAGGGTTCGAAGAGGTGAAGCGAGTGGTGGGCTTC ATGGACTACGAAGACACTTCCGCCAAGTACAAACTTGATTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1235:255322..260713+

>mRNA_F-serratus_M_contig1235.1784.1 ID=mRNA_F-serratus_M_contig1235.1784.1|Name=mRNA_F-serratus_M_contig1235.1784.1|organism=Fucus serratus male|type=CDS|length=1350bp|location=Sequence derived from alignment at F-serratus_M_contig1235:255322..260713+ (Fucus serratus male)
ATGCTGGCCTCTGCCACTAACATCTGCTCGACGTTACGAAGGATCCCTTG
CATCGGGGATGGAGACACGGGCTACGGGAACGCCGTCAACGTAAGGCGGA
CGGTCAAGGGCTACGCGCAAATGCTGGCCTCTGCCACTAACATCTGCTCG
ACGTTACGAAGGATCCCTTGCATCGGGGATGGAGACACGGGCTACGGGAA
CGCCGTCAACGTAAGGCGGACGGTCAAGGGCTACGCGCAAGTGGGGATGG
CGGGCATCATGATTGAGGATCAAGTAGCGCCGAAACGCTGTGGACACGTC
CGAGGAAAAAGCGTCGTGGGGAGGGAAGAGGCCTACAGTCGCGTCAGGGC
GGCCTGCGACGCAAGGTGGGGATGGCGGGCATCATGATTGAGGATCAAGT
AGCGCCGAAACGCTGTGGACACGTCCGAGGAAAAAGCGTCGTGGGGAGGG
AAGAGGCCTACAGTCGCGTCAGGGCGGCCTGCGACGCAAGGGACGAAGGA
ACCGACATCATTGTCCTGGCGCGCACAGATGCAAGGGGAGCCTTAGGCCT
TGAGGAGGCGCTGGAGCGATGTCGGGAGTTCAGACGAATCGGCGCAGACA
TCACTTTCTTAGAAGCTCCGCAGAGCAAGGAAGAGATGCAACGGTACTGT
CAAGAGGTTGACGGTCCTAAGCTCGCCAATATGCTCGAGGGACGAAGGAA
CCGACATCATTGTCCTGGCGCGCACAGATGCAAGGGGAGCCTTAGGCCTT
GAGGAGGCGCTGGAGCGATGTCGGGAGTTCAGACGAATCGGCGCAGACAT
CACTTTCTTAGAAGCTCCGCAGAGCAAGGAAGAGATGCAACGGTACTGTC
AAGAGGTTGACGGTCCTAAGCTCGCCAATATGCTCGAGTTTGGGGACACC
CCGATCCTGCCGCCTGCGCAGCTCCAAGAGATGGGATACAAGATCGCGGC
GTACCCGCTGAGCCTTCTGAGCGCCAGCATCAAAGCTATGAACACCGCGC
TAGCGAGGCTCAAGACTGAGGAACCCCTGGACGACTTGCTGGAAGGGTTC
GAAGAGGTGAAGCGAGTGGTGGGCTTCATGGACTACGAAGACACTTCCGC
CAAGTACAAACTTGATTAGTTTGGGGACACCCCGATCCTGCCGCCTGCGC
AGCTCCAAGAGATGGGATACAAGATCGCGGCGTACCCGCTGAGCCTTCTG
AGCGCCAGCATCAAAGCTATGAACACCGCGCTAGCGAGGCTCAAGACTGA
GGAACCCCTGGACGACTTGCTGGAAGGGTTCGAAGAGGTGAAGCGAGTGG
TGGGCTTCATGGACTACGAAGACACTTCCGCCAAGTACAAACTTGATTAG
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