mRNA_F-serratus_M_contig68.17827.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig68.17827.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI) HSP 1 Score: 394 bits (1012), Expect = 4.880e-122 Identity = 330/420 (78.57%), Postives = 367/420 (87.38%), Query Frame = 3
Query: 537 MSIAEAAPVLAPTPHF-QPGASFQENEGG----------RPGAPSTSSRKPGS-RSGRTKPRPGGVHAHVAAYEGDLAKLRRYVEAGGELEKRDSYRATPLLLAAEKGHEDCVTFLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRVPKRLSSRKEISNLLAAKETESMLRVDVISAVERNDVTGVKSFIAGKGDLNLRGKNDMTPLHVATFNERVEIVKLLLESGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPSERNTTASVQKQLQEESYKSIPKNIAQIRKQTAALQQRVDTNESIFVQKAIAIKGLRIAIEEKDTEIRNXXXXXXXXXXXXXXXXXKMTAIEEFIKQTAEACRGDNKALEQALKVLIEKNTSRDGQCQVS 1760
MS+A+AAP+L+ TP Q G++FQ+ +GG G+ S+SSRKPGS R+GR+KPRPGGVHAHVAAYEGDL KLRRY EAGG+LEKRDSYRATPLLLAAEKGHE CV +LLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGR+PKRL+SRKEISNLLAAKETES L VDVI AVERNDV G+KSFI+GKGDLN +GKNDMTPLHVA+FN R +IV++LL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTP+ER+T SVQ+ L+ ESYKSIPKNIAQIRKQT ALQ RVDTNESIFVQKAIAIKGLRIAIE+KD+EIR XXXXXXXXXXXXXXKMTAIEE + Q AEA +G +A+EQ LK LI+KNTSR+G C+VS
Sbjct: 1 MSMADAAPMLSATPRSGQLGSAFQDGDGGFDTTGAGARAAGGSGSSSSRKPGSSRTGRSKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGLKSFISGKGDLNQKGKNDMTPLHVASFNGRTDIVRMLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMNQAAEASQGGKRAVEQVLKGLIDKNTSREGTCRVS 420
BLAST of mRNA_F-serratus_M_contig68.17827.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 3.020e-10 Identity = 130/319 (40.75%), Postives = 178/319 (55.80%), Query Frame = 3
Query: 696 VHAHVAAYEGDLAKLRRYVEAGGELEKRDSYRATPLLLAAEKGHEDCVTFLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRVPKRLSSRKEISNLLAAKETESMLRV-----DVISAVERNDVTGVKSFIAGKGD-------------------LNLRGKNDMTPLHVATFNERVEIVKLLLESGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPSERNTTASVQKQ---LQEESYKSIPKNIAQIRKQTAALQQRVDTNESIFVQKAIAIKGLRIAIEEKDTEI 1571
+H H AAY G L+ Y+ GG+LE RD ++AT L+L AE+GH V L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L++ I +L E M+R D++ AVE ND V +FIA + LN G+ M+ +H+A F+ + ++LLLE+G+ XXXXXXXXXXXXXXXX E++ Q+ L+ +++++ P N+ +R A + ++D E +FV+K +AIK LR A+++KD ++
Sbjct: 817 IHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRIL---RIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXXCEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDL 1132 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig68.17827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig68.17827.1 >prot_F-serratus_M_contig68.17827.1 ID=prot_F-serratus_M_contig68.17827.1|Name=mRNA_F-serratus_M_contig68.17827.1|organism=Fucus serratus male|type=polypeptide|length=453bp MAGYQALSIARPSIFLWYQSSFLEGGRTMAAKGTSAGRKSLDRAMSIAEAback to top mRNA from alignment at F-serratus_M_contig68:315599..337750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig68.17827.1 ID=mRNA_F-serratus_M_contig68.17827.1|Name=mRNA_F-serratus_M_contig68.17827.1|organism=Fucus serratus male|type=mRNA|length=22152bp|location=Sequence derived from alignment at F-serratus_M_contig68:315599..337750- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig68:315599..337750- >mRNA_F-serratus_M_contig68.17827.1 ID=mRNA_F-serratus_M_contig68.17827.1|Name=mRNA_F-serratus_M_contig68.17827.1|organism=Fucus serratus male|type=CDS|length=2718bp|location=Sequence derived from alignment at F-serratus_M_contig68:315599..337750- (Fucus serratus male)back to top |