mRNA_F-serratus_M_contig68.17823.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A6H5KZX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX0_9PHAE) HSP 1 Score: 322 bits (825), Expect = 3.600e-90 Identity = 179/307 (58.31%), Postives = 221/307 (71.99%), Query Frame = 2
Query: 1523 AKKSGARGKRGGALRSLKSP---RSEEGPRFVAFSAVSGENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEEGLPVAEGIVRGAGPSTPGLPKKRLKSAGGQKGRKRAR-------ELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKVGAAAQAFNVPGEVGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILKSSG 2413
A+ S RGKR A+ + +P R E GPRFV S V+ ++TPG RRSGR RVAP+KFW+GDNIQY VDE+GL VAEGIV+G P+ P P + GG+ G+KR R + P+SP K S++ K K +EK+++C+VWDEETA R VVM ++N+ +H + AT R PGKEK+G AAQAF V EVGISEWL+GRL +P GAIKDSEHVA STQIYVVAEGQP+ALE+AIAMP+KK K FD KTAQRFLLSPGDHF+VPVNN+YRLENHS+ ++AVIYWTI+K+ G
Sbjct: 617 ARLSVGRGKRSTAVATTTTPGPPRREWGPRFVDISEVAEVSHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKG--PALP-EPSSTSRKRGGE-GKKRRRPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKR--------TTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIKAGG 911
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: D8LJZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ6_ECTSI) HSP 1 Score: 317 bits (813), Expect = 5.340e-89 Identity = 168/284 (59.15%), Postives = 205/284 (72.18%), Query Frame = 2
Query: 1583 RSEEGPRFVAFSAVSGENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEEGLPVAEGIVRGAGPSTPGLPKKRLKSAGGQKGRKRAR-------ELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKVGAAAQAFNVPGEVGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILKSSG 2413
R E G RFV S V+ ++TPG RRSGR RVAP+KFW+GDNIQY VDE+GL VAEGIV+G P P ++ G +G+KR R + P+SP K S++ K K +EK+++C+VWDEETA R VVM ++N+ +H + AT R PGKEK+G AAQAF V EVGISEWL+GRL +P GAIKDSEHVA STQIYVVAEGQP+ALE+AIAMP+KK K FD KTAQRFLLSPGDHF+VPVNN+YRLENHS+ ++AVIYWTI+K G
Sbjct: 542 RREGGSRFVDISEVAEVSHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSPSRKR----GSEGKKRRRPPAVKDEHMSPLSPSKVSEMRKSKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKR--------TTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIKICG 813
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A7S2FXX0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXX0_9STRA) HSP 1 Score: 144 bits (364), Expect = 7.540e-35 Identity = 93/266 (34.96%), Postives = 144/266 (54.14%), Query Frame = 2
Query: 1631 ENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEEGL----PVAEGIVRGAGPSTPGLPKKRLKSAGGQKGRKRARELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNM--ANHTLAATLDRPPGKEK-VGAAAQAFNV-PGEVGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILK 2404
++++ G RRS R R +++W+ + + Y E+GL P+ GI + TP P ++ KR R+ +S Q++ LP+ + ++ VW+E+ A ++ R+ M L T DR PG+E VG AAQ F + P I W+SG + +P AIKD+E V Y +Q++ VAE QP + E+AIAMP + +F+P++AQR+LLSPGD FFV N+YRL+NHS+ ++WTI+K
Sbjct: 2 DSDSSGARRSKRQRYPVLEYWRNERMIYERPEDGLGEVLPMVAGISERS--KTPAAPTRK----------KRPRKDISMSQPVPIQVSDLPEQYEFKDSDKGRVWNEKEAKASKMKIICRSKAMKKTERELPITADRDPGEEDLVGVAAQGFLMNPMSSAIPGWISGYVTLPPRAIKDAEGVGYCSQVFFVAECQPGSFEVAIAMPQDQ----------QIVFEPESAQRYLLSPGDQFFVAPGNVYRLQNHSKKVDCKLFWTIIK 245
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A7S2SRM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM5_9STRA) HSP 1 Score: 139 bits (349), Expect = 4.820e-31 Identity = 93/256 (36.33%), Postives = 132/256 (51.56%), Query Frame = 2
Query: 1652 RRSGRHRVAPIKFWKGDNIQY-RVDEEGLPVAEGIVRGAGPSTPGLPKKRLKSAGGQKGRKRARELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKE-KVGAAAQAFNVPGE-VGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILKSS 2410
RRS R R P+ +WK + Y R EGL V G T + +A +K R R R++ + + + L P+G+ +K E+ VW EE V+ R++ + L T R + +VGAAAQAF V + W+SG +V+P AIKD E V S+Q++ VA+ QP +LE+AI + + FD TAQRFLLS GD F++P NIYRLENHSE I+W I++S+
Sbjct: 214 RRSRRVRYPPLAYWKNERYVYERRASEGLGEVLPTVAGVSERT------KTPAAAARKKRPRPRKIDRGNALPSKDL---PQGREFKKHEKAKVWSEEAQRQRKMTVIARSSQLEEGELPITAKRTKDESSRVGAAAQAFKVESAGPDLPTWISGHVVLPPHAIKDPERVGNSSQVFFVADCQPKSLEVAIGLDQDR----------PTDFDRATAQRFLLSSGDQFYIPPFNIYRLENHSEDQDCKIFWAIIQSA 450
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A1E7F509_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F509_9STRA) HSP 1 Score: 124 bits (311), Expect = 6.960e-26 Identity = 98/283 (34.63%), Postives = 140/283 (49.47%), Query Frame = 2
Query: 1625 SGENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEE---------GLPVAEGIVRGAGPSTPGLPKKRLKS-AGGQKGRKRARELKPISP-MKASQLAALPKGKYLEKE------EECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKV-GAAAQAFNVPGE-----VGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILK 2404
S + + G+RRS R +V P+++W+ + ++Y E +PV GI + TP +K+ K+ AG +K K KP+S K + K L K EE +WD+ T + VV A++M + L + R + KV G AAQAFN+P + VG ++ G LV+P IKDSE V Q + V Q A+E+A P++ DP TAQRFLL PGD F VP N YRLENHSET+ ++ WTI++
Sbjct: 245 SPDYDEDGSRRSKRAKVKPLQYWRNEKMEYGAHNEDGYIGEAFGNMPVVTGIQKAL--PTPYKKRKQPKNNAGAKKNGK-----KPVSSNAKGNDQEEEFNSKKLRKRYKFHDGEEAYLWDDVTDDTADQKVVAYASSMEGNDLPISKKRRKVEGKVTGKAAQAFNIPSDDNDDYVG---YIMGNLVLPPKGIKDSESVGPCAQTFTVCHCQSKAVEVAYGDPDEP----------DGELDPATAQRFLLGPGDMFRVPPGNCYRLENHSETTDCLLTWTIIR 507
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A067CPM9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CPM9_SAPPC) HSP 1 Score: 122 bits (306), Expect = 6.050e-25 Identity = 96/269 (35.69%), Postives = 132/269 (49.07%), Query Frame = 2
Query: 1628 GENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEEGL----PVAEGIVRGAGPSTPGLPKKRLKSAGGQKGRKRARELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKV--GAAAQAFNVPGEVGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILKSSGS 2416
GE++ G RRS R R+ P+ ++K + Y + GL P I R AG ++P +K+A G + +K P ASQL P+ KY + +WDE +AT+ + M A L P ++ V G A Q FNV G + W+SGR+++P GA+K SE V Q++VV QP ALE+A P SS FD TA RF L PGD F+VP NN Y L NHS + +A + + ILK S
Sbjct: 335 GESDHNGPRRSKRRRIQPLAWYKCERPVYERRDNGLGLILPTISHIER-AGTNSP------IKNAAGNRKKKSKHATFP-----ASQLP--PQFKY-STADAGELWDEASATS-------KTVKMIGRYGTADLFPLPAEDGVPSGFACQTFNVVGSTSVPTWISGRVLLPPGAVKASESVGSCAQVFVVIGCQPMALEVAFGHP------------SSPAFDDATASRFTLGPGDEFYVPANNAYFLRNHSTSVEAELRFMILKPKPS 569
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A7S2B2G0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2G0_9STRA) HSP 1 Score: 114 bits (284), Expect = 9.450e-25 Identity = 71/173 (41.04%), Postives = 103/173 (59.54%), Query Frame = 2
Query: 1928 VWDEETATNMPRHVVMRATNMANHT--LAATLDRPPGKE-KVGAAAQAF---NVPGEVGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMP--------NKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILK 2404
VW E+ +V R +M +T L T DR + +VG AAQ+F ++P + I W+SG + +P AIKD+E V + +Q++ VAE QP + EL+IA P ++L ++S + IF+P TAQRF+LS GDHFF+P N+YRLENHS+ +YWTI+K
Sbjct: 10 VWSEKEQGTKKMKIVNRQESMQKNTRDLPITTDRAEHEGVEVGQAAQSFLMDSIPSQR-IPGWISGFVTLPPLAIKDAEGVGFCSQVFFVAECQPESFELSIADPASEHQVTRRQQLGAESGE-IAEIIFEPATAQRFILSAGDHFFIPPGNVYRLENHSKHKTCKLYWTIIK 180
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: T0QG80_SAPDV (Mif2_N domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG80_SAPDV) HSP 1 Score: 121 bits (304), Expect = 2.230e-24 Identity = 94/269 (34.94%), Postives = 131/269 (48.70%), Query Frame = 2
Query: 1628 GENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEEGL----PVAEGIVRGAGPSTPGLPKKRLKSAGGQKGRKRARELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKV--GAAAQAFNVPGEVGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILKSSGS 2416
GE++ G RRS R R+ P+ ++K + Y + GL P I R AG ++P +K+A G + +K P ASQL + K + E +WDE +AT+ + M A L P ++ V G A Q FNV G + W+SGR+++P GA+K SE V Q+++V QP ALE+A P S+ FD TA RF L PGD F+VP NN Y L NHS T +A + + ILK S
Sbjct: 479 GESDPHGPRRSKRRRIQPLAWYKCERPVYERRDNGLGLILPTISHIER-AGTNSP------IKNAAGNRKKKSKHATFP-----ASQLPSEFKYSTADSGE---LWDEASATS-------KNVKMIGRYGTADLFPLPAEDGVPSGFACQTFNVVGSTSVPTWISGRVLLPPGAVKASESVGSCAQVFIVIGCQPMALEVAFGHP------------SNPTFDDATASRFTLGPGDEFYVPANNAYFLRNHSPTVEAELRFMILKPKPS 713
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A448Z4G1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4G1_9STRA) HSP 1 Score: 116 bits (290), Expect = 7.710e-23 Identity = 93/280 (33.21%), Postives = 133/280 (47.50%), Query Frame = 2
Query: 1622 VSGENNTPGTRRSGRHRVAPIKFWKGDNIQYRVDEE---------GLPVAEGIVRGAGPSTPGLPKKRLKSAG-GQKGRKR---ARELKPISPMKASQLAALPKGKYLEKEEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKV-GAAAQAFNVPGE-----VGISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILK 2404
V + G RRS R RV P++FW+G+ ++Y E +PV GI + TP +K +K++ +KG K+ ++ K + K KY + EE +WD+ + VV A+NM L + R + V G AAQAFN+P + VG ++ G L +P G IKDSE V Q + V Q A E+A P+ D ++AQRFLL PGD F VP N YRLENHSE + ++ WTI++
Sbjct: 373 VEASPDENGPRRSRRARVKPLQFWRGEKLEYGAHNERGYIGKAFGDMPVVTGIKKAL--PTPYKKRKPVKTSNVSRKGSKKNDVTDTRGSVADEKFNSKKLRRKYKYHDGEE-AYLWDDIADETADQKVVAYASNMQGSDLPISKKRKKEEGNVTGKAAQAFNIPNDDSDDYVG---YIMGNLTLPPGGIKDSESVGPCAQTFTVVRCQLKAFEVAYGDPDLP----------DGELDAESAQRFLLGPGDMFRVPPGNSYRLENHSEHTDCLLTWTIIR 636
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Match: A0A835YQ32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ32_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.680e-23 Identity = 65/166 (39.16%), Postives = 91/166 (54.82%), Query Frame = 2
Query: 1913 EEECVVWDEETATNMPRHVVMRATNMANHTLAATLDRPPGKEKVGAAAQAFNVPGEV--GISEWLSGRLVVPEGAIKDSEHVAYSTQIYVVAEGQPNALELAIAMPNKKLKSQSNSNSSSNIFDPKTAQRFLLSPGDHFFVPVNNIYRLENHSETSQAVIYWTILK 2404
EE C+V+D + + ++ R ++ +L D AA+AF+V G G+S W SG L +P +K +E V TQ+Y V +P +LELAIA K S+ ++ FD TAQR+LLSPGDHF+VP N+YRLENH+ + A I W IL
Sbjct: 4 EESCLVYDVDARGEEQKQIIFRNDSLVYQSLHLA-DGQAENSAPCQAARAFSVRGAAACGLSSWSSGALTLPPRGLKAAERVDDHTQLYWVTSCRPYSLELAIA------KIPEGSDRPADAFDDATAQRYLLSPGDHFYVPPRNVYRLENHAPDADAQICWAILN 162 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig68.17823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig68.17823.1 >prot_F-serratus_M_contig68.17823.1 ID=prot_F-serratus_M_contig68.17823.1|Name=mRNA_F-serratus_M_contig68.17823.1|organism=Fucus serratus male|type=polypeptide|length=762bp MDSIRAVMPRTAAKGQDNGEDPANANLEALREFVKSMQSKTMSRVWRGRRback to top mRNA from alignment at F-serratus_M_contig68:264857..281366- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig68.17823.1 ID=mRNA_F-serratus_M_contig68.17823.1|Name=mRNA_F-serratus_M_contig68.17823.1|organism=Fucus serratus male|type=mRNA|length=16510bp|location=Sequence derived from alignment at F-serratus_M_contig68:264857..281366- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig68:264857..281366- >mRNA_F-serratus_M_contig68.17823.1 ID=mRNA_F-serratus_M_contig68.17823.1|Name=mRNA_F-serratus_M_contig68.17823.1|organism=Fucus serratus male|type=CDS|length=4572bp|location=Sequence derived from alignment at F-serratus_M_contig68:264857..281366- (Fucus serratus male)back to top |