mRNA_F-serratus_M_contig679.17811.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig679.17811.1
Unique NamemRNA_F-serratus_M_contig679.17811.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: D8LN02_ECTSI (Dynein heavy chain dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN02_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 1.750e-118
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            GELEEAIREVM AKPFFLEVND QVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILR++MIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKE  EVK WL+CDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLL RW
Sbjct: 1360 GELEEAIREVMTAKPFFLEVNDAQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRHAMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKEPPEVKSWLVCDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLARW 1554
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A2P4WW42_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WW42_9STRA)

HSP 1 Score: 331 bits (849), Expect = 1.880e-103
Identity = 153/195 (78.46%), Postives = 179/195 (91.79%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G L EAIREVM +KPFFL+V+D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ ++++CGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLTAAAR+VVKE   V+ W+ICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+ ++RL+++W
Sbjct:  855 GALGEAIREVMTSKPFFLQVDDLQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQALVRCGQLVKTHVMNPKSMPRERLLGHMDLDTREWEDGVLTAAARQVVKEPENVRSWIICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDIAIERLVSKW 1049
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: K3WM96_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WM96_GLOUD)

HSP 1 Score: 334 bits (857), Expect = 9.280e-103
Identity = 154/195 (78.97%), Postives = 181/195 (92.82%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G L++AIREVMV+KPFFL+V++ Q+ KMLQLKE+LDQRMGCV+VGPSG GKST+W IL+ ++IKCGQ V +HV+NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKE  +V+ W+ICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG N+NF+FETHDLKFASPAT+SRMGMIFLSDED+D+KRL+++W
Sbjct: 1989 GTLDDAIREVMVSKPFFLQVDELQIHKMLQLKESLDQRMGCVVVGPSGSGKSTVWQILQQALIKCGQLVKSHVMNPKSMPRERLLGHMDLDTREWEDGVLTDAARKVVKEPEQVRSWIICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNINFIFETHDLKFASPATISRMGMIFLSDEDMDIKRLVSKW 2183
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A0P1AJ37_PLAHL (Dynein heavy chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ37_PLAHL)

HSP 1 Score: 333 bits (855), Expect = 1.770e-102
Identity = 155/195 (79.49%), Postives = 180/195 (92.31%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G LEEAIR+VM  KPFFL+V+D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L++++I+CGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLTAAAR+VVKE   V+ W+ICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+ ++RL+T+W
Sbjct: 2026 GALEEAIRDVMTGKPFFLQVDDMQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQHALIQCGQLVKTHVMNPKSMPRERLLGHMDLDTREWEDGVLTAAARQVVKEPENVRSWIICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMAIERLVTKW 2220
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A3F2RUL8_9STRA (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RUL8_9STRA)

HSP 1 Score: 332 bits (852), Expect = 4.490e-102
Identity = 154/195 (78.97%), Postives = 180/195 (92.31%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G L EAIR+VM +KPFFLEV++ Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ ++I+CGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLTAAAR+VVKE   V+ W+ICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+D++RL+++W
Sbjct: 2048 GALGEAIRDVMTSKPFFLEVDELQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQALIRCGQLVKTHVMNPKSMPRERLLGHMDLDTREWEDGVLTAAARQVVKEPESVRSWIICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMDIQRLVSKW 2242
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A1W0A6P2_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6P2_9STRA)

HSP 1 Score: 332 bits (851), Expect = 6.140e-102
Identity = 154/195 (78.97%), Postives = 177/195 (90.77%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G+LE AIREVM  KPF  +V+D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ +MI+CGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKE   V+ W++CDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+D+KRLL++W
Sbjct: 3201 GDLEAAIREVMEKKPFCCQVDDLQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQAMIRCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEPENVRSWIVCDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMDIKRLLSKW 3395
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A1V9ZJN7_9STRA (Dynein heavy chain n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJN7_9STRA)

HSP 1 Score: 329 bits (844), Expect = 5.330e-101
Identity = 154/195 (78.97%), Postives = 176/195 (90.26%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G+LE AIR VM  KPF L+ +D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ +MIKCGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKE   V+ W++CDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+D+KRL+T+W
Sbjct: 1915 GDLEAAIRVVMEQKPFGLQADDLQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQAAMIKCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEPENVRSWIVCDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMDMKRLVTKW 2109
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: T0R6A9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R6A9_SAPDV)

HSP 1 Score: 329 bits (844), Expect = 5.330e-101
Identity = 153/195 (78.46%), Postives = 176/195 (90.26%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G+LE AIR VM  KPF  +V+D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ +MI+CGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKE   V+ W++CDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+D+KRL+T+W
Sbjct: 1927 GDLEAAIRVVMAQKPFCCQVDDLQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQAMIQCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEPEHVRSWIVCDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMDMKRLVTKW 2121
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A067CTG5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTG5_SAPPC)

HSP 1 Score: 329 bits (843), Expect = 7.180e-101
Identity = 153/195 (78.46%), Postives = 176/195 (90.26%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G+LE AIR VM  KPF  +V+D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ +MI+CGQ V TH++NPKSMPR+RLLGHMDLDTREW DGVLT AARKVVKE   V+ W++CDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+D+KRL+T+W
Sbjct: 1899 GDLEAAIRLVMAQKPFCCQVDDLQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQAMIQCGQLVKTHIMNPKSMPRERLLGHMDLDTREWHDGVLTDAARKVVKEPEHVRSWIVCDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMDMKRLVTKW 2093
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BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Match: A0A0W8DB10_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DB10_PHYNI)

HSP 1 Score: 328 bits (842), Expect = 9.670e-101
Identity = 152/195 (77.95%), Postives = 179/195 (91.79%), Query Frame = 2 
Query:    2 GELEEAIREVMVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRNSMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKESHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVFETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW 586
            G L +AIR+VM +KPFFL+V+D Q+RKMLQLKE+LDQRMGCV+VGPSG GKST+W +L+ ++I+CGQ V THV+NPKSMPR+RLLGHMDLDTREW DGVLTAAAR+VVKE   V+ W+ICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFG NVNFVFETHDL+FASPAT+SRMGMIFLSDED+ ++RL+++W
Sbjct:  638 GALGDAIRDVMTSKPFFLQVDDLQIRKMLQLKESLDQRMGCVVVGPSGSGKSTVWQVLQQALIRCGQLVKTHVMNPKSMPRERLLGHMDLDTREWEDGVLTAAARQVVKEPENVRSWIICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGPNVNFVFETHDLRFASPATISRMGMIFLSDEDMAIERLVSKW 832
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig679.17811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN02_ECTSI1.750e-11895.38Dynein heavy chain dynein heavy chain n=1 Tax=Ecto... [more]
A0A2P4WW42_9STRA1.880e-10378.46Dynein heavy chain (Fragment) n=1 Tax=Phytophthora... [more]
K3WM96_GLOUD9.280e-10378.97Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AJ37_PLAHL1.770e-10279.49Dynein heavy chain n=1 Tax=Plasmopara halstedii Ta... [more]
A0A3F2RUL8_9STRA4.490e-10278.97Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A1W0A6P2_9STRA6.140e-10278.97Dynein heavy chain n=1 Tax=Thraustotheca clavata T... [more]
A0A1V9ZJN7_9STRA5.330e-10178.97Dynein heavy chain n=1 Tax=Achlya hypogyna TaxID=1... [more]
T0R6A9_SAPDV5.330e-10178.46Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067CTG5_SAPPC7.180e-10178.46Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A0W8DB10_PHYNI9.670e-10177.95Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig679contigF-serratus_M_contig679:367717..373254 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.5
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D8LN02
Preferred nameDYNC2H1
KEGG koko:K05636,ko:K10414
KEGG Pathwayko04145,ko04151,ko04510,ko04512,ko04962,ko05132,ko05145,ko05146,ko05165,ko05200,ko05222,map04145,map04151,map04510,map04512,map04962,map05132,map05145,map05146,map05165,map05200,map05222
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0001568,GO:0001578,GO:0001944,GO:0002119,GO:0002164,GO:0003002,GO:0003008,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0005858,GO:0005868,GO:0005874,GO:0005875,GO:0005929,GO:0005930,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007030,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0007600,GO:0007605,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0007626,GO:0007628,GO:0007635,GO:0007638,GO:0008049,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008569,GO:0008589,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009790,GO:0009791,GO:0009799,GO:0009855,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010256,GO:0010467,GO:0010646,GO:0010647,GO:0010648,GO:0010970,GO:0010996,GO:0012505,GO:0015630,GO:0016043,GO:0016462,GO:0016485,GO:0016545,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017015,GO:0017111,GO:0019098,GO:0019538,GO:0019953,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021953,GO:0022008,GO:0022414,GO:0022607,GO:0022611,GO:0023051,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030286,GO:0030326,GO:0030512,GO:0030534,GO:0030705,GO:0030900,GO:0030990,GO:0031223,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032504,GO:0032838,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034622,GO:0035082,GO:0035107,GO:0035108,GO:0035113,GO:0035721,GO:0035735,GO:0036156,GO:0036159,GO:0040024,GO:0042073,GO:0042221,GO:0042623,GO:0042995,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044458,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045177,GO:0045184,GO:0045433,GO:0045503,GO:0045505,GO:0045880,GO:0046907,GO:0048065,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048585,GO:0048598,GO:0048609,GO:0048699,GO:0048731,GO:0048736,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050896,GO:0050954,GO:0051094,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051959,GO:0055115,GO:0060173,GO:0060179,GO:0060271,GO:0060322,GO:0060976,GO:0061062,GO:0061063,GO:0061065,GO:0061066,GO:0061512,GO:0065003,GO:0065007,GO:0070286,GO:0070727,GO:0070925,GO:0071704,GO:0071840,GO:0072358,GO:0072359,GO:0072594,GO:0090092,GO:0090101,GO:0090287,GO:0090288,GO:0090659,GO:0097014,GO:0097542,GO:0097730,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902494,GO:1903844,GO:1903845,GO:1905515,GO:1990939,GO:2000026
EggNOG free text desc.dynein light chain binding
EggNOG OGsCOG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04516,ko04812
Exons5
Model size587
Cds size555
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig679.17811.1prot_F-serratus_M_contig679.17811.1Fucus serratus malepolypeptideF-serratus_M_contig679 367717..373223 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932073.414167-CDS-F-serratus_M_contig679:367716..3677721622932073.414167-CDS-F-serratus_M_contig679:367716..367772Fucus serratus maleCDSF-serratus_M_contig679 367717..367772 -
1690964133.267362-CDS-F-serratus_M_contig679:367716..3677721690964133.267362-CDS-F-serratus_M_contig679:367716..367772Fucus serratus maleCDSF-serratus_M_contig679 367717..367772 -
1622932073.4273772-CDS-F-serratus_M_contig679:368173..3683631622932073.4273772-CDS-F-serratus_M_contig679:368173..368363Fucus serratus maleCDSF-serratus_M_contig679 368174..368363 -
1690964133.2796211-CDS-F-serratus_M_contig679:368173..3683631690964133.2796211-CDS-F-serratus_M_contig679:368173..368363Fucus serratus maleCDSF-serratus_M_contig679 368174..368363 -
1622932073.4395833-CDS-F-serratus_M_contig679:371849..3719421622932073.4395833-CDS-F-serratus_M_contig679:371849..371942Fucus serratus maleCDSF-serratus_M_contig679 371850..371942 -
1690964133.2889228-CDS-F-serratus_M_contig679:371849..3719421690964133.2889228-CDS-F-serratus_M_contig679:371849..371942Fucus serratus maleCDSF-serratus_M_contig679 371850..371942 -
1622932073.45411-CDS-F-serratus_M_contig679:372291..3724651622932073.45411-CDS-F-serratus_M_contig679:372291..372465Fucus serratus maleCDSF-serratus_M_contig679 372292..372465 -
1690964133.2983115-CDS-F-serratus_M_contig679:372291..3724651690964133.2983115-CDS-F-serratus_M_contig679:372291..372465Fucus serratus maleCDSF-serratus_M_contig679 372292..372465 -
1622932073.4704833-CDS-F-serratus_M_contig679:373181..3732231622932073.4704833-CDS-F-serratus_M_contig679:373181..373223Fucus serratus maleCDSF-serratus_M_contig679 373182..373223 -
1690964133.3078609-CDS-F-serratus_M_contig679:373181..3732231690964133.3078609-CDS-F-serratus_M_contig679:373181..373223Fucus serratus maleCDSF-serratus_M_contig679 373182..373223 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932073.4853108-UTR-F-serratus_M_contig679:373223..3732541622932073.4853108-UTR-F-serratus_M_contig679:373223..373254Fucus serratus maleUTRF-serratus_M_contig679 373224..373254 -
1690964133.3172348-UTR-F-serratus_M_contig679:373223..3732541690964133.3172348-UTR-F-serratus_M_contig679:373223..373254Fucus serratus maleUTRF-serratus_M_contig679 373224..373254 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig679.17811.1

>prot_F-serratus_M_contig679.17811.1 ID=prot_F-serratus_M_contig679.17811.1|Name=mRNA_F-serratus_M_contig679.17811.1|organism=Fucus serratus male|type=polypeptide|length=185bp
MVAKPFFLEVNDTQVRKMLQLKEALDQRMGCVIVGPSGCGKSTLWSILRN
SMIKCGQAVNTHVVNPKSMPRQRLLGHMDLDTREWFDGVLTAAARKVVKE
SHEVKCWLICDGDVDPEWIESLNSVLDDNHLLTLPNGERINFGSNVNFVF
ETHDLKFASPATVSRMGMIFLSDEDVDVKRLLTRW
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mRNA from alignment at F-serratus_M_contig679:367717..373254-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig679.17811.1 ID=mRNA_F-serratus_M_contig679.17811.1|Name=mRNA_F-serratus_M_contig679.17811.1|organism=Fucus serratus male|type=mRNA|length=5538bp|location=Sequence derived from alignment at F-serratus_M_contig679:367717..373254- (Fucus serratus male)
GGGCGAGCTGGAAGAGGCGATTCGTGAGGTCATGGTGGCCAAGCCATTTT
TCTTAGAAGTCAATGATACCCAGGTATACGTGTTATAGCAGTCGTTCATT
ATTCCATAAGATCAGTCAGTGCTGCCTTATCAAATGAGTTGGTTTCCAAC
CACAAAAGAAAAGTTAATCGAAACTTTCCACGATTCTTAGGGACCTCGAT
TACTCTTGGATAGAGCATAGGCGACGGGATAACTCTACGGGCCATTCACA
CTTTGGCTTAAGTGAGCGCGCCGAGGTGATAAAGAGAGAAAAAAATTAAC
AGGAATAAACATTAAATGGACATTAAACAGAGAAAGTAGTGCTAGAAAGG
GTAGTTGCCCTCTCCCCGGATTGAAAGAGGCATATGCTTCGGATCCTACG
ACTAGATTTTAAAGTGGCCAAAAAGAACGCATAATAATAGTCAGCGCTCA
CAACTCTAATGGGTCAATTTCGGGCTTCACTAGTGTGCAGGAACGTCGGA
GGAAAGGAGAACGCACCGCGCCAGAAGCATATATAAGGGCAATCCTTGAT
GCTGACATGCGGGGAGAGCACGACCGCTTCGCAGTCTGGGATCTATATTT
CAGTGCCCCCCTTTTCCCCTTGCGTGTGTTCCTCTACCACGGAGCTGACC
AATGATTCAAGATGGATGTATTATTTGGCGGATATAGAATGAAACATTTG
AGTAGCACCTAATCGCGAATAAAATATGATTTGAGACACTCAGCCCTCGA
TACGCAACCTTGCCTTCATGTTCCCGCCTGGCCCTGTAGGTTCGTAAGAT
GTTGCAGCTAAAGGAGGCGTTAGACCAGCGCATGGGCTGCGTGATCGTCG
GTCCAAGTGGATGCGGGAAGTCCACCTTGTGGTCCATCCTTCGAAATTCC
ATGATCAAGTGCGGCCAGGCAGTCAACACCCACGTGGTCAACCCCAAGAG
TATGCCACGCCAGGTTTGTAGATGCCATCATGTTCGTCTCAATTGCCCCA
TGCCGTGCTTTATACGTCTGGTATGTGTTCTACTGCCAATGTTTGCGGAA
TGTACACTGCTTTCGAATTCCTAAAGTGCCAGACTTTTACTTGTGTTAAT
CGAGTATGGGGAGCTCAGACGGCCAACCATCCTGTATCAAATGTGATGCG
CCCGTCGTTTCTGTGAAACATAGCCTAGGGTCCTTCATGTACACTCCCAT
TCAAGAGTAGGCATAGGAACCTGTGTTAACCTGTTGGTGTGTCCAACTCG
CGTTTTGCAAGCAACGCGCCCCTCCTGATGATCGGGGGTGCTTTCTCCCA
TGGTTTTACCAGCGTTTGCTGGGCCATATGGATCTGGACACGCGCGAATG
GTTCGACGGAGTTCTCACAGCTGCAGCTCGAAAGGTCGTCAAAGAGTCAC
ATGAGGCGAGTACCGCACTAGAACTGTGTATTTAACCACTTTAATACTGT
AAAAACACAACCTTTGGTCCACTGTGTATTGGATATCGCACATAACGATG
GCCAGTAATAGGAAGTCTCCGGAGCGGGCAGGATCTGTTACGGGCGTGGT
AGTGCTGTACTCGGGGTTGGTCGATGATGGCTGGTGCTCACAGGATTAAA
CGCAGGAGACGAATCGAACCTCTTTGTAATCGTCTCTTAGTACCTCACAT
CGTGGGCATACTCTCGTATCATACAATCACATACGCACAATCATACAACC
AATACAACTTATGCAACTGACTCAGTAGGGTCTACGAAAGAATCGACCCG
GGGATCACCAAACATATCCCCTGAGAACAAACTTTCTAATTTACACCACA
TGCTGCTGTTCGGCGAGTAACCTAGCCTTTCACGCTTTCGTCCCCCCTTA
CTCACCGAGCGGTTGCATGCGAATCACGAAATATCCAAAGAAGTTTTAGA
AGCAACTTTCAAAGCTACTCTTGACTATTGGTCCTTCAAATATATATCAG
AATCGTCAGACCAAGATTTTCCTACTATTTCAGTTCTATGCAAAAAAAAT
GATTTTCTGAAACCTTTCTGCTCTGACGACATATGTGTATGTTATATTTC
TGTTTCGCGTACAACATAAGTCATTACATCAGAATACGTGCTCGCCGTAT
AGATTTCAAGAAAAAACTCTGAATGTAATTCTGCCTTTCGAAAGCAATAT
TTCTTGAACCGTTCGTCACGTCATGACAATCTTCAATAAATCGATCACTT
ATCTTCTTGGTCAACTCTGTGCAGAGTTTCTCTGTCGATTTCAATCAAAC
ATTTTTTATTTTATTTTTATTTTTGGCACCCGACGAAATCTACTTGTTCA
GGATGACAATTTATTACGTACGCACGTGAAACTTTCAACTTGAATACCTC
GCAACAAAAGTAACAGCAGTATTACGCGGGAAAATGTACTCTTCTATATA
GGTCCAACCTACAAAAGAAATCTCGATACAACAGTACCTTTGTTAATCAT
GAACCGAGATGATCCAGGGCCAGCTCAAAAGCTGTTCCTCTGGTTTGCGT
GTCCCGATCGCTCCCATCTTCAGAGGATAATTCTTGCTGCCTTCAGGACC
TGGCATGATAGCATGGGAAATTGCAAGAAAGGCAAAACAAAATAAAACAA
AAACACGCACAGCAGCAGAGCATATAGTATACAGTATGGCCACTTGGCGG
AGATGAACAGATCAGCACCCGTCCCGCCGGGGTCATATTGCTTGTTCTGG
TCGGTCGGCGTCGTCCCTTGCCGATGCTGGCCGAACGTAACCTCCTCACG
GGCGGCGACTTGTGCTGTTGTAGCTGTATTCGGGCTTCCCCCGAAATCTG
CTTGAATGGGGTAGTTTCCCCAATCTGTGCTTTTTGCTGTTGTCCCTTGT
TGCCGAAGTACCGCCAGTTTGAAATGACGATCGGCAAGTTGTCATGGTTT
GTGGTCCATCTCGACCTTGGTTTGGGAAATAAAATCTCCCCCCTCATCTG
TGCTCGGGGTACCGTTTACAACCACCTTTTACTCTTCCTCCAAGGCTCGT
GGTCGCTTCTGTAGGCTGTTTTCCCCGTCCCGATGTCCCCCCATCACATC
ATCGGGCTGCACTGATGTTGAGGTTTGGGTGCTGGACGTGCTGGAGGAGG
ATCTTATGTCCTGGTGATCATTTTGAGAGTAGGTGGAAATATACCCTTCT
TTACCTTGATCAGTCTACTCTGCAAGTTATCAATATAATCCGGAGGGATG
GGCAGAGGCCTCGCCGGGTGCTCCCCCTGCGGGCAATTGAGGGCCTCGCA
GTTATGACATCTAACTGTTCTGTTTATCTCCTCCAAGCACGCCTCGAGTT
CGAGCTGCATACACGTCCGATCCTAGCTTGACGCGTCCACACCATTTTTG
CTTCCTCCTCAGAGTGAAATTGAGCATTTTCTTCGGAAATATCGTTTCCA
GCCTTCTCTATAAAGAAGTTCATTTTGACCGACTGTACTCTCTCCCCAGT
TAGAAATTGAGTATCAAATCTCACATTCTGAGGGGTGCCCCCCCTGGCTG
CCTCCACTCCTCTGATCACCGTCCTCACGCGCTGGCTCTGGTGCCGGTAA
CTCGCACTCCTCTCGGTGCTTCCAGAATCGGTAGTGGTACTTGTTTCCTC
CTCCGGGTGCTCTCTAGATCGGTGCTTCCTCCAGCTCTTCTGGATGAACG
CTTCGTCTCTTGATGCTCGAAAACAAACTCGAATTTTTCGAAGGCACTAA
AAACACTGTCTACTCTCCGCACCGATGCTCTTGTCAGAAAACTCCGATCG
ATGCGATCGATCACTTGCTAGTGTAATGGGAAGTCTCTGGAGCGGGCAGG
GTCTGTTACGGGATTATATGCAGTGCTGTGCTCGGGGTTGGTCGATGATG
GGGGGGGTGCTCGCAGGACTAGTCGCAGGAGATGCACGGAACCTCGTTGT
ATTATCGTCTCTTAGTACCCCACATCATGGGCATACTCTCGTAACATACA
ATCGCATACGCATAACCATACAATCAATACAACTCTGATACAACTGAATC
AGTAGGGTCGACGAAAGAGCCAACACGTCGATTTACACCGCATGTTACAG
TTCGGCAAGTAACCTAGCCTTTCACGCTTTCATCCAGGTGTACATGGTGT
ATGCTCGTGTACCTGTTTGACATGTTGTGTTGCCTACGGTGGACAACTGA
CAACCGCTTCTTGAAGCTGTTTATGCTGCGTGGGAATACCTGTCGTCCTT
CGTTGAGCTCGTTATTTGGGCACCATTTGATCATCATGTGTTAATTGGCA
CTCGACTAGAGTTTTCACATCTGGTATCTCTATACCAATTAAACATTAGT
TACGCGATGTCCGCCGGTCGCCCCGGTAGCTCAGAGGTACCTCGTAACCC
TCTGACACGTTGGGACGTGAATTCGATCCCGGCAAACGGGATTTTTCTCA
CTAAAAGCTAAAAAACTAAAATAAAAATGCCCAACGGGTGGGGAACGATT
AATTCGTTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGGAT
GGCTGAATCCTTCTCGCGATAAAAGGTAAGGCACGTATCGCAGAAGGAAG
GTGGATGAGAAATCCTGTGTGGCCTTCCTTCTGTGTGACACCGGCTGGTA
CGTCTATTGATGTCCAGACTAGATGGGAAGAAACACACACACACACACAA
GTTAATACTTGTTTTCTATAGCAAGTACTTTGCACTTCACGCACAAAAGA
GTCAACACGTAGTATTCCTCACGTAAAGTGGTTTTTAGTATTGTTGTTGC
ATTTGAACCCTGCTGGAGCGTTGTTGCATTTGAAGGCTGGTACTAGGCAG
ATCTCCCTTTGAAGCCTGTCGCAGACCATCGGCGAGCGCTAACACTTCGG
GTGGAATCAGCTGCCAACAGTCGCTACAACTGTTTCGACAGGTCAAATGT
TGGCTGATTTGCGATGGAGATGTCGACCCCGAGTGGATCGAGTCCCTCAA
CTCCGTCTTGGACGACAACCATTTGCTTACCCTGCCGAACGGAGAGCGGA
TTAACTTTGGGAGTAACGTAAACTTCGTTTTCGAGACTCACGACCTCAAG
TTTGCTTCGCCCGCTACTGTTAGCCGGATGGGTAAGCAATCATAAATCAG
CGACTTCTCGAATCCGCCCGTTTTGGCGTAGAGGAAGCGGGCTTCTCACT
GGGTTTGTGTCCCAAAGCAGAATAAGTGGCGTGAGCGGACCATCATGGAA
CCGAAAAAGCTGTCTGTTCGGTATTTTTCTGCCGTGTGAAGTTTGATGGT
ATTACGCTGTTGGGATATATCGTGGGTTGTTAATGGTCTCCTGTGACGAG
CGTCCAAAATGGGATCCGCTTTCACTACGTGAGTCTTGTATCACTCCGAT
TTGAAGCCACACGAGGTGGGGCGGAGTGTACACGTAAGAACATGTCTGAG
GACGTGCAGATCCAAACTCTCCAACGTTGATGATTCGTGTCGATTACGAT
TTCTTGCGGTTGCTCGCGACGCTTTGCTGCAGGTATGATATTTTTGTCCG
ACGAAGACGTTGACGTCAAGCGTCTGTTGACGAGATGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig679:367717..373254-

>mRNA_F-serratus_M_contig679.17811.1 ID=mRNA_F-serratus_M_contig679.17811.1|Name=mRNA_F-serratus_M_contig679.17811.1|organism=Fucus serratus male|type=CDS|length=1110bp|location=Sequence derived from alignment at F-serratus_M_contig679:367717..373254- (Fucus serratus male)
ATGGTGGCCAAGCCATTTTTCTTAGAAGTCAATGATACCCAGATGGTGGC
CAAGCCATTTTTCTTAGAAGTCAATGATACCCAGGTTCGTAAGATGTTGC
AGCTAAAGGAGGCGTTAGACCAGCGCATGGGCTGCGTGATCGTCGGTCCA
AGTGGATGCGGGAAGTCCACCTTGTGGTCCATCCTTCGAAATTCCATGAT
CAAGTGCGGCCAGGCAGTCAACACCCACGTGGTCAACCCCAAGAGTATGC
CACGCCAGGTTCGTAAGATGTTGCAGCTAAAGGAGGCGTTAGACCAGCGC
ATGGGCTGCGTGATCGTCGGTCCAAGTGGATGCGGGAAGTCCACCTTGTG
GTCCATCCTTCGAAATTCCATGATCAAGTGCGGCCAGGCAGTCAACACCC
ACGTGGTCAACCCCAAGAGTATGCCACGCCAGCGTTTGCTGGGCCATATG
GATCTGGACACGCGCGAATGGTTCGACGGAGTTCTCACAGCTGCAGCTCG
AAAGGTCGTCAAAGAGTCACATGAGCGTTTGCTGGGCCATATGGATCTGG
ACACGCGCGAATGGTTCGACGGAGTTCTCACAGCTGCAGCTCGAAAGGTC
GTCAAAGAGTCACATGAGGTCAAATGTTGGCTGATTTGCGATGGAGATGT
CGACCCCGAGTGGATCGAGTCCCTCAACTCCGTCTTGGACGACAACCATT
TGCTTACCCTGCCGAACGGAGAGCGGATTAACTTTGGGAGTAACGTAAAC
TTCGTTTTCGAGACTCACGACCTCAAGTTTGCTTCGCCCGCTACTGTTAG
CCGGATGGGTCAAATGTTGGCTGATTTGCGATGGAGATGTCGACCCCGAG
TGGATCGAGTCCCTCAACTCCGTCTTGGACGACAACCATTTGCTTACCCT
GCCGAACGGAGAGCGGATTAACTTTGGGAGTAACGTAAACTTCGTTTTCG
AGACTCACGACCTCAAGTTTGCTTCGCCCGCTACTGTTAGCCGGATGGGT
ATGATATTTTTGTCCGACGAAGACGTTGACGTCAAGCGTCTGTTGACGAG
ATGGGTATGATATTTTTGTCCGACGAAGACGTTGACGTCAAGCGTCTGTT
GACGAGATGG
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