prot_F-serratus_M_contig676.17782.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig676.17782.1
Unique Nameprot_F-serratus_M_contig676.17782.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length143
Homology
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BLAST of mRNA_F-serratus_M_contig676.17782.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 8.030e-9
Identity = 46/124 (37.10%), Postives = 59/124 (47.58%), Query Frame = 0 
Query:    1 MRQEWAEMEPIKVHGFVSRKETKRQLLETGLLGVFLLRFSETHKGCFILSITCKPDGMTANTGHSQSRLNVKELIVTVQEDGRWKSHYNKEFKDGITYGSLSELVLDKPSLRKLYPDTPKETVF 124
            +R +WA + PI+VHGF+ R E +  L        FLLRFSE H G  ++S  C          H  S       +V V E G+     +K       Y SL +LV     LR+LYPD PKE VF
Sbjct:  914 IRNDWARIWPIRVHGFIGRHEAQALLRMKPT--AFLLRFSERHPGKLVVSRAC----------HHHS-------LVEVTEGGQCFMEVDKR-GTRRKYESLHDLVTQNSLLRQLYPDIPKEQVF 1017
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig676.17782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KC67_9PHAE8.030e-937.10SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 13..125
e-value: 5.7E-14
score: 53.9
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 13..126
IPR000980SH2 domainPFAMPF00017SH2coord: 14..105
e-value: 2.8E-9
score: 36.9
IPR000980SH2 domainPROSITEPS50001SH2coord: 12..105
score: 11.858

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig676contigF-serratus_M_contig676:11002..11601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig676.17782.1mRNA_F-serratus_M_contig676.17782.1Fucus serratus malemRNAF-serratus_M_contig676 10708..12649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig676.17782.1 ID=prot_F-serratus_M_contig676.17782.1|Name=mRNA_F-serratus_M_contig676.17782.1|organism=Fucus serratus male|type=polypeptide|length=143bp
MRQEWAEMEPIKVHGFVSRKETKRQLLETGLLGVFLLRFSETHKGCFILS
ITCKPDGMTANTGHSQSRLNVKELIVTVQEDGRWKSHYNKEFKDGITYGS
LSELVLDKPSLRKLYPDTPKETVFSTSPTTGSSASIIHGMDT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036860SH2_dom_sf
IPR000980SH2