prot_F-serratus_M_contig676.17780.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig676.17780.1
Unique Nameprot_F-serratus_M_contig676.17780.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length128
Homology
BLAST of mRNA_F-serratus_M_contig676.17780.1 vs. uniprot
Match: A0A6H5KC67_9PHAE (SH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC67_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 2.040e-14
Identity = 54/138 (39.13%), Postives = 80/138 (57.97%), Query Frame = 0
Query:    4 DKTQPLPPIFRLPAPRV--TYRGGVELQRVLTSLEDTDTACVTITGKPGIGKTERALQACYYLRERNLVCSIFFAHCRD----------IVAQHGALPSSGKSCARVECLCQLIGLALGMSLPA-SSPSDLWEFLLKS 128
            D+T+ +PP  R P  +   +Y G V +Q V+  L D  T CVT+TG+PG GKTE A+QAC Y+RER+   S  +A C             V  +    +SG S + +E LC+LIG+A+GM  P  S+ ++L +F+ K+
Sbjct:  226 DETRQVPP--RPPCKKAVSSYMGLVRVQFVVRLLLDPQTVCVTVTGEPGSGKTELAIQACDYVRERHHFDSFLWADCDKAALDACPETFFVIPNSPNGASGDSVS-LEDLCRLIGVAIGMPQPGPSTANELHQFIFKN 360          
BLAST of mRNA_F-serratus_M_contig676.17780.1 vs. uniprot
Match: D7FNY4_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY4_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 9.600e-14
Identity = 54/131 (41.22%), Postives = 72/131 (54.96%), Query Frame = 0
Query:   10 PPIFRLPAPRV--TYRGGVELQRVLTSLEDTDTACVTITGKPGIGKTERALQACYYLRERNLVCSIFFAHCRDIVAQHGALPSSGKSC-ARVECL--------CQLIGLALGMSLPA-SSPSDLWEFLLKS 128
            PP  R P  +   +Y+G   LQ+V+  L D   ACVTITG+PG GKTERA+QAC Y+RER+      +A C D  A +     SG    A   CL        C+LIGLA+GM  P  +S  +L +F+  +
Sbjct:  133 PPTPRPPCKKAVPSYKGLAGLQQVVRLLLDERAACVTITGEPGSGKTERAIQACDYVRERHRFDCFLWADC-DKAALNSCSDKSGNPFFALPTCLKDSAWEDPCRLIGLAIGMPQPGPTSEQELHQFIFNN 262          
BLAST of mRNA_F-serratus_M_contig676.17780.1 vs. uniprot
Match: A0A6H5KH01_9PHAE (CHAT domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH01_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 8.240e-13
Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    2 FEDKTQPLPPIFRLPAPRVTYRGGVELQRVLTSLEDTDTACVTITGKPGIGKTERALQACYYLRERNLVCSIFFAHCRDIVAQHGALPSSGKSCARVECLCQLIGLALGMSLPA-SSPSDLWEFL 125
            F D+T+  P   R   P   Y+G  ELQ+V+  L D  TACVT+TG+ G GK+ERA+QAC Y+R R+   ++++A  +     H    +   S    +  C+LIG+A+GM+ P  SS  +L  FL
Sbjct:  242 FVDETREPPARPRCARPVPFYQGLEELQKVVEMLVDPVTACVTVTGEHGSGKSERAIQACDYVRMRHHFDALWWADMK-----HAMATAINSSVWFYDDPCRLIGIAIGMTQPGPSSEEELVRFL 361          
BLAST of mRNA_F-serratus_M_contig676.17780.1 vs. uniprot
Match: D7FNY6_ECTSI (SH2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY6_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 3.070e-10
Identity = 51/142 (35.92%), Postives = 73/142 (51.41%), Query Frame = 0
Query:    4 DKTQPLPPIFRLPAPRV--TYRGGVELQRVLTSLEDTDTACVTITGKPGIGKTERALQACYYLRERNLVCSIFFAHC-----------------RDIVAQHGALPSSGKSCARVECLCQLIGLALGMSLPA-SSPSDLWEFL 125
            D+T  LPP  R P  +   +Y G   +Q V+  L D   ACVT+TG PG GKTE A+QAC Y+R R+   S  +A C                 R  V  +    +SG S +  E LC+ IG+A+G+  P  S+ ++L +F+
Sbjct:  242 DETHRLPP--RPPCKKAVSSYMGPARVQHVVRLLLDERAACVTVTGDPGSGKTELAIQACDYVRYRHHFNSFLWADCDKAALDASPYNLVSSADRFYVLPNSPNGASGDSVSS-EDLCRQIGVAIGIPQPGPSTTNELHQFI 380          
BLAST of mRNA_F-serratus_M_contig676.17780.1 vs. uniprot
Match: A0A6H5JN51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN51_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 7.450e-8
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = 0
Query:   10 PPIFRLPAPRV--TYRGGVELQRVLTSLEDTDTACVTITGKPGIGKTERALQACYYLRERNLVCSIFFAHCRDIVAQHGALPSSG 92
            PP  R P  +   +++G   +Q+V+  L +   ACVT+TG+ G GKTERA+QAC Y+RER+   S  +A C        +  SSG
Sbjct:   52 PPTPRPPCKKAVPSFKGLAGVQQVVRLLLNPQAACVTVTGEHGSGKTERAIQACDYVRERHHFDSFLWADCDKAAFNSCSDKSSG 136          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig676.17780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KC67_9PHAE2.040e-1439.13SH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FNY4_ECTSI9.600e-1441.22SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KH01_9PHAE8.240e-1339.20CHAT domain-containing protein (Fragment) n=1 Tax=... [more]
D7FNY6_ECTSI3.070e-1035.92SH2 domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JN51_9PHAE7.450e-840.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 17..120
e-value: 9.5E-6
score: 27.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig676contigF-serratus_M_contig676:7495..8346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig676.17780.1mRNA_F-serratus_M_contig676.17780.1Fucus serratus malemRNAF-serratus_M_contig676 7488..8346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig676.17780.1 ID=prot_F-serratus_M_contig676.17780.1|Name=mRNA_F-serratus_M_contig676.17780.1|organism=Fucus serratus male|type=polypeptide|length=128bp
MFEDKTQPLPPIFRLPAPRVTYRGGVELQRVLTSLEDTDTACVTITGKPG
IGKTERALQACYYLRERNLVCSIFFAHCRDIVAQHGALPSSGKSCARVEC
LCQLIGLALGMSLPASSPSDLWEFLLKS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase