prot_F-serratus_M_contig675.17771.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig675.17771.1
Unique Name	prot_F-serratus_M_contig675.17771.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	323

Homology

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BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: D7FHB9_ECTSI (RPOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB9_ECTSI)

HSP 1 Score: 437 bits (1124), Expect = 1.230e-152
Identity = 213/254 (83.86%), Postives = 231/254 (90.94%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQYEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAK 254
            MPNLRAPQVEI DLRED+VEF+L NTDTSVANALRRVMIAEVPTMAIDLV+I DNSSVLQDEFLSHRLGLIPL AD GVQYEYNYDCDCEDYC KCSAVFTLDVSWDKK+ GRPEHM+DQPVHVTSADL + DPRLR VHFAPSDQTNSDI QDAG++IAKLAKGQR+QLTAVAKKGI KEHAKWSPV+VAT+KFEPVIEINE+KE LLTPEQ+AEFVEICPAKVY  DEK G ++VEHRD+CM+     YL +
Sbjct:    1 MPNLRAPQVEIVDLREDFVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADPGVQYEYNYDCDCEDYCDKCSAVFTLDVSWDKKALGRPEHMQDQPVHVTSADLVSSDPRLRAVHFAPSDQTNSDISQDAGIIIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPVIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKSGTIFVEHRDMCMWRRTGRYLRR 254

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BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A835YK59_9STRA (Putative DNAdirected RNA polymerase II 36 kDa polypeptide A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK59_9STRA)

HSP 1 Score: 375 bits (962), Expect = 3.830e-127
Identity = 180/312 (57.69%), Postives = 240/312 (76.92%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQYEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQL 312
            MPN RAP++E+ +L+ D+V+F+L +TDTSVANALRRVMIAEVPTMAIDLV+I +NSS LQDEFL+HRLGL+PL  + G ++ YN DCDCED C +CS   +LDVSW+ K+ GRP+H +D PV VTS+DL + DPR+ PVHFA SD    D  QD G+++AKL++GQR+QLTAVAKKGI KEHAKWSPV VAT++F+P+I++ +D    LT  QR + VE CP KVY +DE+   + V +R  CMYC++C  +A S+K  PE+D +V V  S +RFIFSVETNG++ A++VV  +L+ +S KL  LRN+L+ +
Sbjct:    1 MPNTRAPKIEVLELKADFVKFVLSDTDTSVANALRRVMIAEVPTMAIDLVTITENSSALQDEFLAHRLGLVPLRCEPGTKFVYNLDCDCEDNCEQCSVTLSLDVSWESKAAGRPDHEKDLPVFVTSSDLVSHDPRVGPVHFASSDII--DASQDDGIMLAKLSRGQRLQLTAVAKKGIAKEHAKWSPVCVATYQFDPIIKVADDVSATLTVAQRQQVVESCPVKVYGLDERTNNIVVRNRLECMYCDECTNVASSLKLRPEDDAVVTVTASQDRFIFSVETNGTIDADQVVQQALEALSLKLQTLRNELINV 310

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BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A7S2Y381_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y381_9STRA)

HSP 1 Score: 322 bits (825), Expect = 4.510e-106
Identity = 157/318 (49.37%), Postives = 230/318 (72.33%), Query Frame = 0

Query:    5 RAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRG--VQYEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDDHPWKQ 320
            R P+V++++LR+D + F L +TD SVANALRRVMIAE PT+AIDLV+I+ N+SV+QDEFL+HRLGLIP+   RG   ++ +NYDCDCEDYC +C+ +F+LDVS+D+++  RP+H  D P+ VTS DL + +P ++ VHFA +D+      QDAG+ + KLA+GQ I+LTA+AK G  KEH+KW    VAT++++P+I++NE+K   L+ EQ  +  E CP  V+ VDEK G L V +R  CMYCE+C  L  +MK+  E+DP + +    N F+F+VETNG++ AEEVV+++L V+  KL +L+   M++ ++   +Q
Sbjct:    6 RFPKVKVQELRDDCIRFELSDTDISVANALRRVMIAETPTLAIDLVTIETNTSVMQDEFLAHRLGLIPIRYHRGDVSKFRFNYDCDCEDYCHQCAVLFSLDVSFDQRAAMRPDHESDLPLTVTSQDLVSNNPDVQAVHFASADEQQQS--QDAGIALLKLARGQAIKLTAIAKLGTQKEHSKWCTCCVATYQYDPIIKLNEEKLDQLSSEQVDQLAESCPVGVFEVDEKTGKLTVVNRMDCMYCEECTRLGDTMKARSEDDPFIDIHADTNVFLFTVETNGALLAEEVVLSALTVLGAKLRDLQMACMEIKEEQGNRQ 321

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BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: K3W7V5_GLOUD (RPOLD domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3W7V5_GLOUD)

HSP 1 Score: 314 bits (804), Expect = 3.770e-103
Identity = 160/320 (50.00%), Postives = 221/320 (69.06%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDD 315
            MPN R P++EI++LR+D+++F L  TD SVANA+RRVMI+EVPT+AIDLVSI+ N+SV+ DEFL+HRLG+IPL  D G++     + Y+ DCDC+++C  CS  F LDV  D+             + VTS  L++LDP +RPV+F+  ++ N+   QD GV+IAKL  GQR++L+A+AK GIGKEHAKWSPV+VATF +EP+I +N+      TPEQ+AE  + CP +VY  DE      V     CMYC++CV +A S K  PE+D  V VR  +++FIFSVET G +  EEVVI +L +I EKL +L++  ++L  D
Sbjct:    1 MPNPRFPKIEIQELRDDFIKFELSETDASVANAIRRVMISEVPTLAIDLVSIEVNTSVMTDEFLAHRLGMIPLYFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFQLDVRADQGV-----------MTVTSEALKSLDPYIRPVNFSSEEELNNT--QDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVLATYTPEQKAELYKSCPTEVYETDENYDQFTVGDSMRCMYCDECVKVADSFKDNPEDDAAVSVRMREDKFIFSVETTGQLRPEEVVICALDLIREKLSSLKHQCLELSQD 307

[Close]

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A8K1CE06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE06_PYTOL)

HSP 1 Score: 311 bits (796), Expect = 5.930e-102
Identity = 161/323 (49.85%), Postives = 225/323 (69.66%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPV-HVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLG-DDH 316
            MPN R P++E+ +LR+D+++F L  TD SVANA+RRVMIAEVPT+AIDLV+I+ N+SV+ DEFL+HRLG+IPL  D G++     + Y+ DCDC+++C  CS  FTLDV            + DQ V  VTS  L + DP +RP+HF+  ++ ++   QD GV+IAKL  GQRI+L+A+AK GIGKEHAKWSPV+VATF +EP+I +N+     L+ +Q+AE  + CPA+VY+ DE    L V     CMYC++CV +A S K  PE+D  + +R  +++FIFSVET G +  EEVVI +L +I EKL +L++  ++L  DDH
Sbjct:    1 MPNPRFPKIEVVELRDDFIKFELSETDASVANAIRRVMIAEVPTLAIDLVTIEANTSVMTDEFLAHRLGMIPLFFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFTLDV------------VADQGVLTVTSESLRSTDPYIRPMHFSSEEEFSNT--QDTGVIIAKLGPGQRIKLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVMNTLSSDQKAELYKSCPAEVYDTDENYDQLTVGDAMRCMYCDECVKVANSFKDNPEDDAALTIRMREDKFIFSVETCGQLRPEEVVICALDIIREKLSSLKHQCLELSHDDH 309

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BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: W4FWZ6_9STRA (RPOLD domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FWZ6_9STRA)

HSP 1 Score: 310 bits (795), Expect = 8.980e-102
Identity = 155/320 (48.44%), Postives = 218/320 (68.12%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDD 315
            MPN R P+++++++R+D+++F L  TDTSVANA+RRVMIAEVPT+AIDLVSI+ N+SV+ DEFL+HRLG+IPL  + G++     + Y+ DCDC+++C  CS  F LDV             E     VTS  L +LDP ++PVHF+  ++ N+   QD GV+IAKL  GQR++L A+AK GIGKEHAKWSPV+VAT+ FEP+I +N++     T EQR E  + CP +V+ +D+    L VE    CMYC++CV LA S +  PE+D  V V  + ++FIFSVET G +  EEVVI +L +I +KL  L++  ++L  D
Sbjct:    1 MPNTRFPKIDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSADCDCDEHCPNCSVEFELDV-----------RAESGTQTVTSDSLRSLDPYIKPVHFSSEEEANNT--QDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELSQD 307

[Close]

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A024G378_9STRA (RPOLD domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G378_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.390e-101
Identity = 160/320 (50.00%), Postives = 218/320 (68.12%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDD 315
            MPN + P+VEI DLR+D+++F LF TD SVANALRRVMIAEVPT+AIDLV+I+ N+SV+ DEFL+HRLG+IPL  D G++     + Y+ DCDCE++C  CS  F LDV             E   + VTS  L+++DP +RPV+F+  ++ N+   QD GV+IAKL  GQ I+L+A+AK GIGKEHAKWSPV+VATF +EP I +N+      TPEQ+AE  + CP +VY  DE      + +   CMYC++CV +A S K  PE+D  V V+  +++FIFSVET G +  EEVVI +L +I EKL  L++  ++L  +
Sbjct:    1 MPNPQFPKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEINTSVMTDEFLAHRLGMIPLFFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDV-----------RAEQGMLSVTSDALKSVDPYIRPVNFSSEEEFNNT--QDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQCLELSQE 307

[Close]

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A067CJB5_SAPPC (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJB5_SAPPC)

HSP 1 Score: 306 bits (783), Expect = 5.890e-100
Identity = 155/320 (48.44%), Postives = 218/320 (68.12%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDD 315
            MP+ R P+++I++LR+D+++F L  TDTSVAN++RRVMIAEVPT+AIDLVSI+ N+SV+ DEFL+HRLG+IPL  D G++     + Y+ DCDC+++C  CS  F LDV             E     VTS  L +LDP + PVHF+  ++ N+   QD+GV+IAKL  GQR++L A+AK GIGKEHAKWSPV+VAT+ FEP+I +N+      T EQR E  + CP +V+ +D+    + VE    CMYC++CV LA+S    PE+D  V V  + ++FIFSVET G +  EEVVI +L +I +KL +L++  ++L  D
Sbjct:    1 MPHPRFPKIDIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSADCDCDEHCPHCSVEFELDV-----------RAESGMQTVTSQSLRSLDPYVHPVHFSSEEELNNT--QDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQD 307

[Close]

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A484DTY5_BRELC (RPOLD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTY5_BRELC)

HSP 1 Score: 305 bits (781), Expect = 1.680e-96
Identity = 156/320 (48.75%), Postives = 221/320 (69.06%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDD 315
            MP+ R P++EI++LR+D++ F L  TD SVANA+RRVMIAEVPT+AIDLVSI+ N+SV+ DEFL+HRLG+IPL  D G++     + Y+ DCDC++ C  CS  F+LDV+ D              + VTS  L++ DP +RPV+F+  ++ N+   QD+GV+IAKL  GQR++L+A+AK GIGKEHAKWSPV+VAT+ ++P+I +N+      TPEQ+AE  + CP +V+  DE    L V     CMYC++CV LA S K  PE+D  V ++  +++FIFSVET G +  EEVVI +L +I EKL +L++  ++L  D
Sbjct:  245 MPHPRFPKIEIQELRDDFIRFELSETDPSVANAIRRVMIAEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADSGV-----------LSVTSEALKSSDPYIRPVNFSSEEELNNT--QDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSSYTPEQKAELYKSCPTEVFETDENYEQLTVGDPMRCMYCDECVKLADSFKDNPEDDSAVSIKMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQD 551

[Close]

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Match: A0A2P4YFS8_9STRA (DNA-directed RNA polymerase II n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YFS8_9STRA)

HSP 1 Score: 301 bits (772), Expect = 2.160e-90
Identity = 154/320 (48.12%), Postives = 219/320 (68.44%), Query Frame = 0

Query:    1 MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLVSIDDNSSVLQDEFLSHRLGLIPLVADRGVQ-----YEYNYDCDCEDYCSKCSAVFTLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSDIFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIEINEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCVYLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISEKLLNLRNDLMQLGDD 315
            MP+ R P++EI++LR+D++ F L  TD SVANA+RRVMI+EVPT+AIDLVSI+ N+SV+ DEFL+HRLG+IPL  D  ++     + Y+ DCDC++ C  CS  F+LDV+ D              + VTS  L++ DP +RPV+F+  ++ N+   QD+GV+IAKL  GQR++L+A+AK GIGKEHAKWSPV+VATF ++P+I +N+      +PEQ+AE  + CP +V+  DE      V     CMYC++CV LA S K  PE+D  V +R  +++FIFSVET G +  EEVVI +L +I EKL +L++  ++L  D
Sbjct:  835 MPHPRFPKIEIQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGRLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADNGV-----------LSVTSEALKSSDPYIRPVNFSSEEELNNT--QDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYDPIITLNQAVLSTYSPEQKAELYKCCPTEVFETDENYEQFTVGDAMRCMYCDECVKLADSFKDNPEDDSAVSIRMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQD 1141

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig675.17771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHB9_ECTSI	1.230e-152	83.86	RPOLD domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A835YK59_9STRA	3.830e-127	57.69	Putative DNAdirected RNA polymerase II 36 kDa poly...	[more]
A0A7S2Y381_9STRA	4.510e-106	49.37	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
K3W7V5_GLOUD	3.770e-103	50.00	RPOLD domain-containing protein n=21 Tax=Oomycota ...	[more]
A0A8K1CE06_PYTOL	5.930e-102	49.85	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
W4FWZ6_9STRA	8.980e-102	48.44	RPOLD domain-containing protein n=8 Tax=Aphanomyce...	[more]
A0A024G378_9STRA	2.390e-101	50.00	RPOLD domain-containing protein n=2 Tax=Albugo Tax...	[more]
A0A067CJB5_SAPPC	5.890e-100	48.44	RNA polymerase Rpb3/Rpb11 dimeriZation domain-cont...	[more]
A0A484DTY5_BRELC	1.680e-96	48.75	RPOLD domain-containing protein n=1 Tax=Bremia lac...	[more]
A0A2P4YFS8_9STRA	2.160e-90	48.13	DNA-directed RNA polymerase II n=1 Tax=Phytophthor...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	SMART	SM00662	rpoldneu2	coord: 18..308 e-value: 1.4E-68 score: 243.8
IPR011263	DNA-directed RNA polymerase, RpoA/D/Rpb3-type	PFAM	PF01193	RNA_pol_L	coord: 20..302 e-value: 8.4E-22 score: 76.9
IPR011262	DNA-directed RNA polymerase, insert domain	PFAM	PF01000	RNA_pol_A_bac	coord: 50..186 e-value: 2.8E-29 score: 101.8
IPR036643	DNA-directed RNA polymerase, insert domain superfamily	GENE3D	2.170.120.12		coord: 44..183 e-value: 1.9E-80 score: 272.1
IPR036643	DNA-directed RNA polymerase, insert domain superfamily	SUPERFAMILY	56553	Insert subdomain of RNA polymerase alpha subunit	coord: 43..187
None	No IPR available	GENE3D	3.30.1360.270		coord: 8..301 e-value: 1.9E-80 score: 272.1
None	No IPR available	PANTHER	PTHR11800:SF2	DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3	coord: 1..310
None	No IPR available	PANTHER	PTHR11800	DNA-DIRECTED RNA POLYMERASE	coord: 1..310
IPR001514	DNA-directed RNA polymerase, 30-40kDa subunit, conserved site	PROSITE	PS00446	RNA_POL_D_30KD	coord: 32..72
IPR036603	RNA polymerase, RBP11-like subunit	SUPERFAMILY	55257	RBP11-like subunits of RNA polymerase	coord: 6..309

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig675	contig	F-serratus_M_contig675:82187..101950 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig675.17771.1	mRNA_F-serratus_M_contig675.17771.1	Fucus serratus male	mRNA	F-serratus_M_contig675 81975..102152 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig675.17771.1 ID=prot_F-serratus_M_contig675.17771.1|Name=mRNA_F-serratus_M_contig675.17771.1|organism=Fucus serratus male|type=polypeptide|length=323bp
MPNLRAPQVEIRDLREDYVEFLLFNTDTSVANALRRVMIAEVPTMAIDLV
SIDDNSSVLQDEFLSHRLGLIPLVADRGVQYEYNYDCDCEDYCSKCSAVF
TLDVSWDKKSTGRPEHMEDQPVHVTSADLEALDPRLRPVHFAPSDQTNSD
IFQDAGVVIAKLAKGQRIQLTAVAKKGIGKEHAKWSPVSVATFKFEPVIE
INEDKEVLLTPEQRAEFVEICPAKVYNVDEKGGALYVEHRDLCMYCEDCV
YLAKSMKSTPEEDPLVKVRPSDNRFIFSVETNGSVTAEEVVITSLKVISE
KLLNLRNDLMQLGDDHPWKQGE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011263	DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR011262	DNA-dir_RNA_pol_insert
IPR036643	RNApol_insert_sf
IPR001514	DNA-dir_RNA_pol_30-40kDasu_CS
IPR036603	RBP11-like