prot_F-serratus_M_contig674.17761.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig674.17761.1
Unique Nameprot_F-serratus_M_contig674.17761.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length224
Homology
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.570e-41
Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            L H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  KN+G+  +  GC I R+ +A  L+  Q   ++SMV RFDVK T++ PA  G     K ++       EE  ++P REA+G++MW +T + PD++ AVRAVAR    P
Sbjct:  845 LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 1059          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.690e-41
Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            L H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  KN+G+  +  GC I R+ +A  L+  Q   ++SMV RFDVK T++ PA  G     K ++       EE  ++P REA+G++MW +T + PD++ AVRAVAR    P
Sbjct: 1224 LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 1438          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.710e-41
Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            L H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  KN+G+  +  GC I R+ +A  L+  Q   ++SMV RFDVK T++ PA  G     K ++       EE  ++P REA+G++MW +T + PD++ AVRAVAR    P
Sbjct: 1244 LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 1458          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.730e-41
Identity = 86/223 (38.57%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            L H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  KN+G+  +  GC I R+ +A  L+  Q   ++SMV RFDVK T++ PA  G     K ++       EE  ++P REA+G++MW +T + PD++ AVRAVAR    P
Sbjct: 1387 LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 1601          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.330e-40
Identity = 86/223 (38.57%), Postives = 130/223 (58.30%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            L H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  KN+G+  +  GC I R+  A  L+  Q   ++SMV RFDVK T++ PA  G     K ++ +  E       +P REAVG++MW +T + PD++ AVRAVAR    P
Sbjct:  436 LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDDKGGE-------WPVREAVGSMMWVSTFSRPDVSFAVRAVARHAHAP 650          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 4.610e-40
Identity = 86/223 (38.57%), Postives = 130/223 (58.30%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            LRHFD +QAF+++ +DE++++ +PE      G + +LNK++Y L +A R W++     +  +GF Q  AD CVFR + +G   V +VVHVDD  +  +++   D+F  +L     +KN+GD  ++ GC   R+  A  LK  Q    E +   F V+   + P   GL  LS+ D+       EE+  +P+RE +G+LMW AT T PDIA AVRAVAR+C  P
Sbjct:   35 LRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFDQ------DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASP 249          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 7.600e-40
Identity = 83/223 (37.22%), Postives = 132/223 (59.19%), Query Frame = 0
Query:    2 LRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            L H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  KN+ +  +  GC I R+ +   L+  Q   ++SMV+RFDV+ T++ PA+ G+    K D+ +  E       +P REA+G++MW +T + PD++ AVRAVAR    P
Sbjct:  399 LNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGE-------WPVREAIGSIMWVSTFSRPDVSFAVRAVARHAHAP 613          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 9.730e-40
Identity = 85/224 (37.95%), Postives = 129/224 (57.59%), Query Frame = 0
Query:    1 ELRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            +L HFD EQAF+++ ++E++Y+ +P+      G + +L K++Y L +A R W+      + A+GFEQ  AD CVFR + DG   +++VVHVDD  A   ++   D+F A+L +   +KN+G+  ++ GC   RN++   L   Q    + +   + V      P +SG+  LS  D        E   +FP+RE VG+LMW AT T PDIA AVRAVAR+C  P
Sbjct:   58 DLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASP 273          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 1.310e-39
Identity = 85/221 (38.46%), Postives = 130/221 (58.82%), Query Frame = 0
Query:    4 HFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            H D +QA+  A +DEE++++ P    E    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V++VDD L    D+   +   A L +KF  +N+G+  +  GC I R+ +A  LK  Q   ++SMV+RFDV+ T++ PA+ G+    K D        E   ++P REA+G++MW +T + PD++ AVRAVAR    P
Sbjct:  577 HSDVKQAYTHATLDEEVFLKRPAGCGEKLRKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTRNVGECEWFDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRD-------NENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAP 789          
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.140e-39
Identity = 82/221 (37.10%), Postives = 129/221 (58.37%), Query Frame = 0
Query:    4 HFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGRCWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKDQATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVESMVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALMWTATMTWPDIACAVRAVARFCEIP 224
            H+D +QA+  A +DEE+++++P    +    + +  +AIY L ++GR W     D +   GFEQ KADPCVFRK+VD    +++V+HVDD L    D+   +   A   ++F  KN+G+  +  GC I R+  A  LK  Q   ++SMV+RFDV+ T++ PA+ G+    K D+       E+  ++P RE +G++MW +T + PD+  AVR VAR    P
Sbjct:  417 HWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDE-DCEELLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRDD-------EKAGEWPVRETIGSMMWVSTFSRPDVLFAVRGVARHAHAP 629          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig674.17761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE3.570e-4138.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE3.690e-4138.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE3.710e-4138.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE3.730e-4138.57Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE1.330e-4038.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE4.610e-4038.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JC10_9PHAE7.600e-4037.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE9.730e-4037.95Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBN2_9PHAE1.310e-3938.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1V1_9PHAE3.140e-3937.10Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..161
e-value: 3.4E-24
score: 85.8
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 26..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig674contigF-serratus_M_contig674:239699..240370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig674.17761.1mRNA_F-serratus_M_contig674.17761.1Fucus serratus malemRNAF-serratus_M_contig674 239699..240370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig674.17761.1 ID=prot_F-serratus_M_contig674.17761.1|Name=mRNA_F-serratus_M_contig674.17761.1|organism=Fucus serratus male|type=polypeptide|length=224bp
ELRHFDAEQAFLKAHIDEEMYIEIPEEVQEFPGAVGRLNKAIYELVEAGR
CWNNTFCDNMTAVGFEQAKADPCVFRKVVDGEAEVVVVVHVDDNLAHAKD
QATVDRFAAELGQKFRLKNMGDAGYHMGCHITRNRKARELKFDQHLRVES
MVRRFDVKKTTKTPAASGLPTLSKADEPRNPEEKEEMRKFPYREAVGALM
WTATMTWPDIACAVRAVARFCEIP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2