prot_F-serratus_M_contig6729.17758.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6729.17758.1
Unique Name	prot_F-serratus_M_contig6729.17758.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	101

Homology

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 7.350e-56
Identity = 83/101 (82.18%), Postives = 92/101 (91.09%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            MGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA N+VY+NVNHGIIA
Sbjct:  159 MGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIA 259

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 3.130e-54
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            + YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA NEVY+NVNHGIIA
Sbjct:  599 IAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIA 699

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 5.660e-54
Identity = 78/87 (89.66%), Postives = 85/87 (97.70%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIA 87
            MGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA
Sbjct:  127 MGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIA 213

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 2.350e-51
Identity = 78/101 (77.23%), Postives = 89/101 (88.12%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            +G++G+F SESYG+TWKVRGFC D SNPEVFD  NVYGDI N DIHHM+YGMYSYGHQGGVWT++ MHDN+ YGFDPHDDSDYLTI NN V++N NHGIIA
Sbjct:  242 LGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWNNKNHGIIA 342

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 9.150e-49
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMH---DNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            +G++G+F SESYG+TWKVRGFC D SNPEVFD  NVYGDI N DIHHM+YGMYSYGHQGGVWT++ MH   DN+ YGFDPHDDSDYLTI NN V++N  HGIIA
Sbjct:  307 LGHMGYFASESYGITWKVRGFCEDMSNPEVFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWNNKKHGIIA 410

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.000e-48
Identity = 79/105 (75.24%), Postives = 85/105 (80.95%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLT------------IANNEVYD 93
            +GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT            I NNEVYD
Sbjct:  236 IGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD 340

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 2.160e-48
Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            +GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +NEVY+N  HGIIA
Sbjct:  212 IGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIA 312

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 5.040e-48
Identity = 72/98 (73.47%), Postives = 84/98 (85.71%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHG 98
            +GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +NEVY+N  HG
Sbjct:  106 IGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG 203

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.620e-47
Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            +GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +NEVY+N  HGIIA
Sbjct:  212 IGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIA 312

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BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 3.460e-46
Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 0

Query:    1 MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIA 101
            M YLG+  SESYGLTWKVRGFC D SNPEVFD  NVYG+I +SDIHH ++G+Y+YGH+ G W  NKMH N +YGFDPHDDSD+LTI +NEVY+N NHGIIA
Sbjct:   35 MAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIA 135

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6729.17758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRR8_ECTSI	7.350e-56	82.18	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
D8LC73_ECTSI	3.130e-54	84.16	Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili...	[more]
D7FIU4_ECTSI	5.660e-54	89.66	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
D7FWW1_ECTSI	2.350e-51	77.23	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
A0A6H5JNF4_9PHAE	9.150e-49	74.04	MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ...	[more]
D8LRM4_ECTSI	1.000e-48	75.24	Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca...	[more]
D7FXE5_ECTSI	2.160e-48	74.26	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
A0A6H5KES9_9PHAE	5.040e-48	73.47	MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34...	[more]
D7G339_ECTSI	1.620e-47	74.26	Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu...	[more]
Q7XAJ9_9PHAE	3.460e-46	71.29	Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..101 e-value: 2.8E-35 score: 123.9
IPR039448	Right handed beta helix domain	PFAM	PF13229	Beta_helix	coord: 36..99 e-value: 1.7E-7 score: 31.2
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 35..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6729	contig	F-serratus_M_contig6729:10936..11457 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6729.17758.1	mRNA_F-serratus_M_contig6729.17758.1	Fucus serratus male	mRNA	F-serratus_M_contig6729 10936..11457 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6729.17758.1 ID=prot_F-serratus_M_contig6729.17758.1|Name=mRNA_F-serratus_M_contig6729.17758.1|organism=Fucus serratus male|type=polypeptide|length=101bp
MGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYY
GMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYDNVNHGII
A

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR039448	Beta_helix
IPR011050	Pectin_lyase_fold/virulence