mRNA_F-serratus_M_contig6716.17749.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A6H5K031_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K031_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 4.200e-14 Identity = 39/40 (97.50%), Postives = 39/40 (97.50%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
MADE ALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME
Sbjct: 33 MADE-ALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 71
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A835ZFH0_9STRA (Ribosomal protein S19-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH0_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.040e-8 Identity = 30/40 (75.00%), Postives = 36/40 (90.00%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
MADE L++EQ+ EMRKKRTF+KFTFRGV+L+KLLDLS E
Sbjct: 1 MADE--LSAEQMMEMRKKRTFKKFTFRGVELEKLLDLSNE 38
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: RS15_HELLU (40S ribosomal protein S15 (Fragment) n=1 Tax=Helix lucorum TaxID=31229 RepID=RS15_HELLU) HSP 1 Score: 52.4 bits (124), Expect = 4.110e-8 Identity = 24/35 (68.57%), Postives = 32/35 (91.43%), Query Frame = 1
Query: 16 ALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
A T+E +AE +KKRTFRKFT+RGVDLD+LLD++M+
Sbjct: 2 AETAEDLAEKKKKRTFRKFTYRGVDLDQLLDMNMD 36
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A0P5MCJ9_9CRUS (40S ribosomal protein S15 n=29 Tax=Eukaryota TaxID=2759 RepID=A0A0P5MCJ9_9CRUS) HSP 1 Score: 55.1 bits (131), Expect = 4.220e-8 Identity = 26/40 (65.00%), Postives = 34/40 (85.00%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
MADET + + ++A +RKKR F+KFT+RGVDLDKLLDL+ E
Sbjct: 1 MADETEIANIELAALRKKRAFKKFTYRGVDLDKLLDLNHE 40
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A0L0HJM2_SPIPD (40S ribosomal protein S15 n=3 Tax=Spizellomycetales TaxID=34478 RepID=A0A0L0HJM2_SPIPD) HSP 1 Score: 54.3 bits (129), Expect = 8.090e-8 Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
MADE E AE++KKRTFRKFTFRGVDLD+LLDLS E
Sbjct: 1 MADE--FDQESAAELKKKRTFRKFTFRGVDLDQLLDLSSE 38
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A1I7ZXZ4_9BILA (40S ribosomal protein S15 n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7ZXZ4_9BILA) HSP 1 Score: 52.8 bits (125), Expect = 3.020e-7 Identity = 28/40 (70.00%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
MADE AL AE++KKRTFRKFT+RGVDLD+LLD+S E
Sbjct: 1 MADEAAL-----AELKKKRTFRKFTYRGVDLDQLLDMSPE 35
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A1W5DC70_9LECA (40S ribosomal S15 n=216 Tax=leotiomyceta TaxID=716546 RepID=A0A1W5DC70_9LECA) HSP 1 Score: 52.8 bits (125), Expect = 3.220e-7 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSMEVRR 129
MAD T +E+ AE++KKRTFRKF++RG+DLD+LLDLS E R
Sbjct: 1 MAD-TDYNAEEAAELKKKRTFRKFSYRGIDLDQLLDLSSEQLR 42
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A818QCB3_9BILA (40S ribosomal protein S15 n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818QCB3_9BILA) HSP 1 Score: 51.6 bits (122), Expect = 3.340e-7 Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSME 120
MAD+ A T AE++KKRTFRKFT+RGVDLD+LLD+S E
Sbjct: 1 MADQEA-TGLSAAELKKKRTFRKFTYRGVDLDQLLDMSNE 39
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: W7T6H9_9STRA (40s ribosomal protein s15 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6H9_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 8.120e-7 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1
Query: 1 MADETALTSEQVA---EMRKKRTFRKFTFRGVDLDKLLDLSME 120
MAD L++E++A E RKKR+F+KFTFRGVDLDKLLDL+ E
Sbjct: 87 MADVEGLSAEEIARIAESRKKRSFKKFTFRGVDLDKLLDLTPE 129
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Match: A0A1Y2E337_9PEZI (Ribosomal protein S19-domain-containing protein n=5 Tax=leotiomyceta TaxID=716546 RepID=A0A1Y2E337_9PEZI) HSP 1 Score: 50.8 bits (120), Expect = 1.230e-6 Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSMEVRR 129
MAD+ +E+ AE++KKR FRKF++RG+DLD LLDL E R
Sbjct: 1 MADDPDYNAEEAAELKKKRQFRKFSYRGIDLDALLDLDSEQLR 43 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6716.17749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6716.17749.1 >prot_F-serratus_M_contig6716.17749.1 ID=prot_F-serratus_M_contig6716.17749.1|Name=mRNA_F-serratus_M_contig6716.17749.1|organism=Fucus serratus male|type=polypeptide|length=48bp MADETALTSEQVAEMRKKRTFRKFTFRGVDLDKLLDLSMEVRRYRKS*back to top mRNA from alignment at F-serratus_M_contig6716:6683..6826- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6716.17749.1 ID=mRNA_F-serratus_M_contig6716.17749.1|Name=mRNA_F-serratus_M_contig6716.17749.1|organism=Fucus serratus male|type=mRNA|length=144bp|location=Sequence derived from alignment at F-serratus_M_contig6716:6683..6826- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6716:6683..6826- >mRNA_F-serratus_M_contig6716.17749.1 ID=mRNA_F-serratus_M_contig6716.17749.1|Name=mRNA_F-serratus_M_contig6716.17749.1|organism=Fucus serratus male|type=CDS|length=288bp|location=Sequence derived from alignment at F-serratus_M_contig6716:6683..6826- (Fucus serratus male)back to top |