mRNA_F-serratus_M_contig671.17742.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LAU2_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU2_ECTSI) HSP 1 Score: 272 bits (696), Expect = 3.870e-82 Identity = 127/235 (54.04%), Postives = 171/235 (72.77%), Query Frame = 3
Query: 375 RGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
R + RELEAM RL+SPH V VYGAVTC D L++VMELL+GGDLR L + +P E ++R+++GDVC+GMAFLHSK+T+HGDLKS+NVLLDGAGRAKI DFG +RW Q + +TGLATY + ++ MS+ W+APEVL+ GS++ SDVYSFGIV WEV+++++PWA R ++ V+ G RPVIP A D+A+ K+CWA P RP F ++ G++ NGW++
Sbjct: 155 REQNQRRAFLRELEAMIRLQSPHTVNVYGAVTCLPDRLILVMELLSGGDLRTLLSSCDQPFPEEQSRRIIGDVCSGMAFLHSKDTVHGDLKSANVLLDGAGRAKIGDFGTSRWAQHTNSTGLATYTTRSSRSTPMSLAWSAPEVLEAEGSTYESDVYSFGIVAWEVISKKMPWADKIRPRDVIC-AVLKGLRPVIPAGATVDIADVMKACWAEEPEARPKFGAIMEGLKLNGWKE 388
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: A0A6H5KY76_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY76_9PHAE) HSP 1 Score: 277 bits (709), Expect = 1.630e-77 Identity = 136/235 (57.87%), Postives = 169/235 (71.91%), Query Frame = 3
Query: 375 RGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
R + RELEAM RLRSPH V VYGA+T R D LV+VMELLAGGDLR L + +PL E + R+++GD+CAGM FLHSKET+HGDLKS+NVLLDGAGRAKI DFG +RW+ + +TGLATY + G+ MS+ W+APEVL GS++ASDVYSFGIV WEVL+RE+PWA V E+Y RVV+ RP IP AP D+A ++CWA P RPT ++ + +NGW D
Sbjct: 977 REKSQRKAFLRELEAMIRLRSPHTVGVYGAITSRPDRLVLVMELLAGGDLRRLLKNSDQPLPEEQCRRIIGDICAGMHFLHSKETVHGDLKSANVLLDGAGRAKIGDFGTSRWSYHTNSTGLATYTKA-GQNTQMSLAWSAPEVLGASGSTYASDVYSFGIVAWEVLSRELPWASVVHPREVYIRVVLNELRPEIPADAPADIATIMRACWAGDPEARPTSSAIMERIESNGWSD 1210
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D7G7X7_ECTSI (ATP binding / amino acid binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X7_ECTSI) HSP 1 Score: 271 bits (692), Expect = 1.200e-75 Identity = 129/238 (54.20%), Postives = 168/238 (70.59%), Query Frame = 3
Query: 366 ERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
++ R G RELEAM RLRSP+ V VYGAVT D +V+VMELL GDL L + PL E ++RQ++GD+CAGMAFLH K T+HGDLKS+NVLLDG GRAKI DFG +RW+Q + +TGLATY + ++ MS+ W+APEVL++GGS++ SDVYSFGIVVWEVL+RE+PWA +R ++ V++G RP AP D+ + AK+CW P R TF +L GM A GW++
Sbjct: 840 QKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTNPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVLSRELPWANKTRPRDILS-AVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGWRE 1076
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LRE9_ECTSI (Transmembrane receptor kinase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE9_ECTSI) HSP 1 Score: 268 bits (684), Expect = 3.900e-75 Identity = 137/233 (58.80%), Postives = 173/233 (74.25%), Query Frame = 3
Query: 381 EESTPGVF-RELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYD--SSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANG 1070
E+S F REL+AM RLRSPH V VYGAVT D +V+VMELL+GGDLR L ++PL E ++R+++GD+CAGMAFLHSK+T+HGDLKS+NVLLDG+GRAKI DFG +RW+Q + +TGLATY SSPG MS+ W+APEVL++GGS+ ASDVYSFGIVVWEV++ E+PWA SR E+ V++G RP D AP D+ E AK+CW P R TF V+ GM + G
Sbjct: 719 EDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSLPDRMVLVMELLSGGDLRTLLRNYQQPLPEEQSRRIIGDICAGMAFLHSKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTNSTGLATYTTRSSPGTQ--MSLAWSAPEVLESGGSTRASDVYSFGIVVWEVVSGELPWANKSRPREILS-AVLMGVRPSFNDIAPTDMVEIAKACWEGEPDARTTFDAVMEGMMSKG 948
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: A0A6H5KF25_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF25_9PHAE) HSP 1 Score: 270 bits (689), Expect = 4.450e-75 Identity = 128/238 (53.78%), Postives = 168/238 (70.59%), Query Frame = 3
Query: 366 ERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
++ R G RELEAM RLRSP+ V VYGAVT D +V+VMELL GDL L + +PL E ++RQ++GD+CAGMAFLH K T+HGDLKS+NVLLDG GRAKI DFG +RW+Q + +TGLATY + ++ MS+ W+APEVL++GGS++ SDVYSFGIVVWEV +RE+PWA +R ++ V++G RP AP D+ + AK+CW P R TF +L GM A GW++
Sbjct: 865 QKQRETRQRKGFLRELEAMIRLRSPNTVNVYGAVTSLSDRMVLVMELLPNGDLLTLLRRSTKPLPEEKSRQIIGDICAGMAFLHGKNTVHGDLKSANVLLDGGGRAKIGDFGTSRWSQHTNSTGLATYTTKANQSTQMSLAWSAPEVLESGGSTYKSDVYSFGIVVWEVFSRELPWANKTRPRDILS-AVLMGIRPSFHVDAPADIVDIAKACWGGEPEERTTFSAILEGMDAKGWRE 1101
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D7FRQ5_ECTSI (Similar to CG1848-PA, isoform A/ leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ5_ECTSI) HSP 1 Score: 267 bits (682), Expect = 6.630e-75 Identity = 128/213 (60.09%), Postives = 164/213 (77.00%), Query Frame = 3
Query: 402 FRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRST-ATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTF 1037
RELEAM RLR+PH V VYGA+T + + LV+VMELLAGGDLR L +++PL E++ RQ++ DVCAGMAFLHSK T+HGDLKS+NVLLDG GRAKI DFG +RW Q + +TGLATY ++PG + +S+ W APEVL+ +S ASDVYSFG+V WEVLTR+ PWA +R +++ RVV+ +RP IP AP D+AE +SCWA+ P +RPTF
Sbjct: 712 LRELEAMIRLRNPHTVNVYGAITSQPNRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIHDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSTHISLAWTAPEVLEAKETSKASDVYSFGMVAWEVLTRQTPWADQTRPRDIFLRVVMREERPAIPADAPVDIAEMVRSCWAQEPLDRPTF 924
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LH32_ECTSI (Leucine rich repeat tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH32_ECTSI) HSP 1 Score: 268 bits (684), Expect = 1.880e-74 Identity = 129/213 (60.56%), Postives = 163/213 (76.53%), Query Frame = 3
Query: 402 FRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRST-ATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTF 1037
REL+AM RLR+PH V VYGA+T D LV+VMELLAGGDLR L +++PL E++ RQ++ DVCAGMAFLHSK T+HGDLKS+NVLLDG GRAKI DFG +RW Q + +TGLATY ++PG + +S W APEVL++ +S ASDVYSFG+V WEVLTR+ PWA +R ++Y RVV+ +RP IP AP D+AE +SCWA+ P +RPTF
Sbjct: 874 LRELDAMVRLRNPHTVNVYGAITSLPDRLVLVMELLAGGDLRAMLKNSEQPLPEDKCRQIIQDVCAGMAFLHSKATVHGDLKSANVLLDGRGRAKIGDFGTSRWAQNTERSTGLATYTTNPGPSAHISFAWTAPEVLESKETSTASDVYSFGMVAWEVLTRQTPWADQARPRDIYLRVVMREERPAIPADAPVDIAEMVRSCWAQEPEDRPTF 1086
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D7FN19_ECTSI (Putative CTR1-like protein kinase/ leucine rich repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN19_ECTSI) HSP 1 Score: 268 bits (684), Expect = 3.090e-74 Identity = 126/223 (56.50%), Postives = 165/223 (73.99%), Query Frame = 3
Query: 402 FRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRST-ATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRAN 1067
REL+AM RLR PH V VYGA+T D L++V+ELL GGDLR L +++PL E ++RQ++ D+CAGMAFLHSK T+HGDLKS+N+LLD GRAKI DFG +RWTQ + +TGLATY ++PG + +S W APEVL+ +S ASDVYSFGIVVWEVL+R++PWA ++ ++Y RVVI GDRP +P AP D+A+ CWA+ P RPTF+ + GG +
Sbjct: 936 LRELDAMIRLRHPHTVNVYGAITSLPDRLILVLELLPGGDLRTMLKNSEQPLPEEQSRQIIKDICAGMAFLHSKSTVHGDLKSANILLDARGRAKIGDFGTSRWTQNTERSTGLATYTTNPGPSTHISFAWTAPEVLEKQTTSKASDVYSFGIVVWEVLSRQLPWADQAQPRDIYLRVVIHGDRPALPADAPVDIADMLLGCWAQEPTERPTFQALSGGEKVK 1158
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: D8LHV1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHV1_ECTSI) HSP 1 Score: 265 bits (677), Expect = 1.590e-73 Identity = 129/239 (53.97%), Postives = 173/239 (72.38%), Query Frame = 3
Query: 363 AERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQD 1079
A+ + + REL+AM RLRSPH V VYGAVT + D +V+VMELL+GGDLR L +++PL + ++R+++GD+CAGMAFLH K+T+HGDLKS+NVLLDG+GRAKI DFG +RW+Q + +TGLATY ++ T MS+ W+APEVL++GGS++ASDVYSFGIVVWEV++ E+PWA +R E+ V++G RP AP D+ E AK+CW P R TF VL GM + D
Sbjct: 853 AKHHQNDSQRRAFLRELDAMIRLRSPHTVNVYGAVTSQPDHMVLVMELLSGGDLRTLLRTSEQPLPQEQSRRIIGDICAGMAFLHEKDTVHGDLKSANVLLDGSGRAKIGDFGTSRWSQHTHSTGLATYTTTKPSTQ-MSLAWSAPEVLESGGSTYASDVYSFGIVVWEVVSGELPWANKTRPREILS-AVLMGARPSFRHDAPADIVEIAKACWVGEPRARTTFDAVLEGMDSKEPHD 1089
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Match: A0A6H5JSI8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI8_9PHAE) HSP 1 Score: 262 bits (669), Expect = 2.520e-73 Identity = 131/239 (54.81%), Postives = 165/239 (69.04%), Query Frame = 3
Query: 366 ERARGEESTPGVFRELEAMFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRARQLVGDVCAGMAFLHSKETIHGDLKSSNVLLDGAGRAKIADFGAARWTQRSTATGLATYDSSPGKTNFMSVLWAAPEVLQNGGSSFASDVYSFGIVVWEVLTREVPWAGVSRDSELYRRVVIVGDRPVIPDTAPDDLAETAKSCWARIPANRPTFRHVLGGMRANGWQDD 1082
++ R RELEAM RLRS + V V+GAVT D +V+VMELLAGGDL L +K+ L E ++R ++ D+C GMAFLHSK T+HGDLKS+NVLLD GRAKIADFG +RWTQ +TGL TY + +T MS+ W+APEVL + SS+ SDVYSFGIVVWEVL+RE+PWA +R SE+ V+ G RP AP D+ + AK+CW P R TFR +L GM+ANGW D+
Sbjct: 662 QKQRETRERRAFLRELEAMIRLRSLNTVNVFGAVTSLPDRMVLVMELLAGGDLLTLLRKSKKALPEEQSRLIIRDICTGMAFLHSKNTVHGDLKSANVLLDDIGRAKIADFGTSRWTQTINSTGLTTYTTKSSQTTQMSIAWSAPEVLDSEKSSYESDVYSFGIVVWEVLSRELPWANKTRPSEVLT-AVLRGIRPSFHVGAPADIVDIAKACWCGEPKERTTFRAILDGMKANGWGDE 899 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig671.17742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig671.17742.1 >prot_F-serratus_M_contig671.17742.1 ID=prot_F-serratus_M_contig671.17742.1|Name=mRNA_F-serratus_M_contig671.17742.1|organism=Fucus serratus male|type=polypeptide|length=222bp MFRLRSPHIVQVYGAVTCRKDELVIVMELLAGGDLRVFLDAAKEPLSENRback to top mRNA from alignment at F-serratus_M_contig671:153090..155601+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig671.17742.1 ID=mRNA_F-serratus_M_contig671.17742.1|Name=mRNA_F-serratus_M_contig671.17742.1|organism=Fucus serratus male|type=mRNA|length=2512bp|location=Sequence derived from alignment at F-serratus_M_contig671:153090..155601+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig671:153090..155601+ >mRNA_F-serratus_M_contig671.17742.1 ID=mRNA_F-serratus_M_contig671.17742.1|Name=mRNA_F-serratus_M_contig671.17742.1|organism=Fucus serratus male|type=CDS|length=1332bp|location=Sequence derived from alignment at F-serratus_M_contig671:153090..155601+ (Fucus serratus male)back to top |