mRNA_F-serratus_M_contig1235.1771.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: D8LD19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD19_ECTSI) HSP 1 Score: 228 bits (580), Expect = 2.020e-67 Identity = 129/184 (70.11%), Postives = 145/184 (78.80%), Query Frame = 2
Query: 140 RLGTARRVWPPANAQVTHPSLGVAALVNAMRLRACATKGDFLKTKGSXXXXXXXXXXXXXXXXXXDDAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGMCCG 691
R G RRVWPP Q+ HPSLGVA LVN R RA A GDF+K+ XXXXXXXXXXXXXXXX+ VTKLIDKYGD +G++GFGGV+GFCSGYAM+KVGK +AFVIG+ F+V QG+NYSGVV IKW + E K L D+NKD KVDKED K LWKRLK LTHNLPAGGGF GGFALG+CCG
Sbjct: 29 RFGNTRRVWPPPQVQIAHPSLGVATLVNGARFRARAGLGDFIKSAQGAGXXXXXXXXXXXXXXXXE--VTKLIDKYGDRIGEVGFGGVVGFCSGYAMMKVGKAIAFVIGVGFIVVQGLNYSGVVTIKWEKAEVKVKSLFDSNKDGKVDKEDAKALWKRLKTALTHNLPAGGGFTGGFALGLCCG 210
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A835YSS8_9STRA (FUN14 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSS8_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.820e-31 Identity = 67/123 (54.47%), Postives = 83/123 (67.48%), Query Frame = 2
Query: 335 DDAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIK----VGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGMCCG 691
DDAVT LID+Y D +GQ+GFGGVLG CSGYA+ K VGK AFVIG F+ Q N+ G V+I WA+V++ A + +D + DKED K+LWK+ + VL NLPAGG F GFALG G
Sbjct: 40 DDAVTALIDRYSDQIGQIGFGGVLGACSGYAVKKASARVGKVAAFVIGTGFVAAQLANHFGYVNISWAQVKDKAVQAIDQDGSGVFDKEDAKMLWKKARKVLKANLPAGGSFGAGFALGFYLG 162
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A7S0AMD2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AMD2_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.270e-26 Identity = 52/115 (45.22%), Postives = 78/115 (67.83%), Query Frame = 2
Query: 338 DAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DAVTK IDK +L ++ FG ++G+CSG A K+G+ +A V G+ F++ QG YSG +D+ W +V+++ +D NKD ++ ED K W++LK VLTHN+P GGF+ GF G+
Sbjct: 42 DAVTKAIDKLKPALAKITFGSLVGYCSGVATKKIGRALAIVAGVGFMIVQGAVYSGYIDVDWKKVQDDVANKVDVNKDGALNAEDAKAYWQKLKKVLTHNIPNAGGFSLGFLYGV 156
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A7S0F743_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F743_9STRA) HSP 1 Score: 112 bits (281), Expect = 7.910e-26 Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 2
Query: 338 DAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DAV IDK + ++ FGGV+GFCSGYAM KVGK VA IG+ F Q Y G +D+ W ++ +A + LD D KVD EDVK+ WK+LK +L + LP GGF+ GF G+
Sbjct: 9 DAVEAAIDKVKPLIAKVSFGGVMGFCSGYAMKKVGKAVAVTIGLGFFGLQSAAYLGYIDVNWNKIVSDAVKPLDATGDGKVDAEDVKVYWKKLKSLLVNGLPNAGGFSVGFLYGV 123
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A024UQX8_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQX8_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.940e-25 Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 2
Query: 335 DDAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DD V++LID+YG S+GQ+ FGG +GFC+G A+ +GK A IG+ F+ Q +G + I W +VE++A +D N D K+ +D KI WK+ + HNLP+ GGFA GFALG+
Sbjct: 85 DDPVSRLIDQYGGSIGQVSFGGAVGFCAGMAVKSIGKIAAVAIGVVFVGAQMAESAGYIQIDWKKVEKDAIAAVDPNGDGKITPDDFKIWWKKFLALSKHNLPSSGGFAAGFALGI 200
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: W4HE21_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE21_9STRA) HSP 1 Score: 109 bits (273), Expect = 8.610e-24 Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 2
Query: 335 DDAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DD V++LID+Y S+GQ+ FGG +GFC+G A+ +GK A IG+ F+ Q +G + I W +VE++A +D N D K+ +D KI WK+ + HNLP+ GGFA GF LG+
Sbjct: 87 DDPVSRLIDQYAGSVGQVSFGGAVGFCAGMAVKSIGKVAAVAIGVVFIGAQMAASAGYIQIDWKKVEKDAIAAVDPNGDGKITPDDFKIWWKKFLALSKHNLPSSGGFAAGFFLGL 202
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A7S1UWI7_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWI7_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.690e-23 Identity = 49/115 (42.61%), Postives = 76/115 (66.09%), Query Frame = 2
Query: 338 DAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DAV +DK L +L FG ++G+CSGYAM ++GK VAF +G+ FL QG+ +G +++ W +++++A + DT D KVD ED+K+ W++ + TH LP GGF+ GF G+
Sbjct: 10 DAVESALDKLKPMLSKLTFGSLVGYCSGYAMKRIGKAVAFGVGVIFLGLQGLVSTGYIEVDWLKIKDDAMKSADTTGDGKVDTEDLKVYWRKFWKMATHKLPDAGGFSLGFLYGV 124
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A6U4A384_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U4A384_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.810e-23 Identity = 50/115 (43.48%), Postives = 76/115 (66.09%), Query Frame = 2
Query: 338 DAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DAVT I+K + ++GFGGV+G+CSG A KVGK +A + G++F+ Q YSG +D+ W +VEE+ + +DT+ D K+ ED WK++K +LT +P+ GGF+ GF G+
Sbjct: 39 DAVTGAIEKMKPAFSKIGFGGVVGYCSGIAAKKVGKAIAVLAGVAFIALQSAVYSGYIDVDWKKVEEDVVKKIDTDGDGKITGEDAINYWKKVKAMLTDKVPSAGGFSLGFLYGV 153
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A662XYV7_9STRA (EF-hand domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYV7_9STRA) HSP 1 Score: 107 bits (267), Expect = 8.060e-23 Identity = 54/115 (46.96%), Postives = 77/115 (66.96%), Query Frame = 2
Query: 338 DAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
D V KLID + G+L LGFCSGYA+ ++GKT A +GI FL+ Q Y+G +DI W +V+++ +D N D K+DK+DVK+ +++L VLT NLP+ GF+ GFALG+
Sbjct: 103 DEVEKLIDLALANAGELTLASGLGFCSGYALKQIGKTAAVAVGIIFLMAQTAAYNGYIDIHWGKVQKDMIAKVDPNGDGKIDKDDVKLWYRKLLKVLTANLPSSAGFSSGFALGI 217
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Match: A0A1V9ZM07_9STRA (EF-hand domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZM07_9STRA) HSP 1 Score: 106 bits (265), Expect = 8.440e-23 Identity = 51/116 (43.97%), Postives = 77/116 (66.38%), Query Frame = 2
Query: 335 DDAVTKLIDKYGDSLGQLGFGGVLGFCSGYAMIKVGKTVAFVIGISFLVCQGVNYSGVVDIKWARVEENAKRLLDTNKDNKVDKEDVKILWKRLKMVLTHNLPAGGGFAGGFALGM 682
DDAV+++ID++G +G++ FGG LGFCSG A+ +VGK A IGI F++ Q G ++I W++VE++A +D + D K+ ++D KI WKR +N P+ GFA GFA G+
Sbjct: 80 DDAVSRIIDQFGSKIGEISFGGFLGFCSGAAVKQVGKAAAVSIGIIFVMAQLAASKGYININWSKVEKDAIAAVDPDGDGKITQKDFKIWWKRFLEFAQYNFPSSSGFAAGFAAGI 195 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1771.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1235.1771.1 >prot_F-serratus_M_contig1235.1771.1 ID=prot_F-serratus_M_contig1235.1771.1|Name=mRNA_F-serratus_M_contig1235.1771.1|organism=Fucus serratus male|type=polypeptide|length=215bp MAPRRRGDVRIASEGVAFPRWFDYSQTSLVRLGTARRVWPPANAQVTHPSback to top mRNA from alignment at F-serratus_M_contig1235:34030..43109- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1235.1771.1 ID=mRNA_F-serratus_M_contig1235.1771.1|Name=mRNA_F-serratus_M_contig1235.1771.1|organism=Fucus serratus male|type=mRNA|length=9080bp|location=Sequence derived from alignment at F-serratus_M_contig1235:34030..43109- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1235:34030..43109- >mRNA_F-serratus_M_contig1235.1771.1 ID=mRNA_F-serratus_M_contig1235.1771.1|Name=mRNA_F-serratus_M_contig1235.1771.1|organism=Fucus serratus male|type=CDS|length=1290bp|location=Sequence derived from alignment at F-serratus_M_contig1235:34030..43109- (Fucus serratus male)back to top |