prot_F-serratus_M_contig67.17721.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig67.17721.1
Unique Name	prot_F-serratus_M_contig67.17721.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	681

Homology

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: D7FJQ6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 3.010e-121
Identity = 213/399 (53.38%), Postives = 274/399 (68.67%), Query Frame = 0

Query:  226 LAQNQLLMSGGGIPLSLRKHRNFRRFVFAVLEDGAPIPLWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLVSPEHLGLRLFSASVSAISVSLAATSIIVEHPLSQIKWARGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHVLVDRMRRVFTVVSILFTAGKVGMAIALVVPFKKKIGKIAPAETGELR 624
            +AQN LLMSGGGIPLSLR HRNFRRFVFAV E GAPIP W SKRS++PAL LGYLDL TD+ T LSY       R G      + + FI  PAL +GA+V R  ++ R +A A QLGL+ E   S +E+SYS  LVALRV++ LFQSLPMLLLQ ++LLVS E L LR+ S  VS +S+++A+T I+ EHPLSQ++W+RGV YP+A    AS++ F TV + GSV VR GF++HPQD+VW+F+ YQ ME+I+R+ S+ V+A+   +Y   +L WLW +R +I+   IG    +E LRFR L+R    P MDSV+DR  AYK+SC  T VET  FL  GN++P    +ET     D  RRVF+V+S+L   GK+ +  ALVVPFK KI +  P   GELR
Sbjct:  254 VAQNALLMSGGGIPLSLRNHRNFRRFVFAVPEHGAPIPPWRSKRSLIPALVLGYLDLFTDLATVLSYW------RSGLTLWFAIGVAFITGPALCAGAYVLREKTVGRGIAAATQLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLVSEECLALRVVSVMVSTLSLAVASTGIVAEHPLSQLRWSRGVKYPTAKLPLASSMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAMPLGYYFFCLLAWLWLSRTFIACVSIGDSVVREKLRFRKLIRFAAAPIMDSVIDRVKAYKVSCFFTCVETACFLAVGNALP--HADETRAS--DLTRRVFSVISLLAMGGKIALGTALVVPFKAKISENLPPAKGELR 642

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5JIQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 2.560e-52
Identity = 146/384 (38.02%), Postives = 209/384 (54.43%), Query Frame = 0

Query:  236 GGIPLSLRKHRNFR--RFVFAVLEDGAPIPLWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLVSPEH-----LGLRLFSASVSAISVSLAATSIIVEHPLSQIKWARGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHVLVDRMRRVFTVVSILFTAGKVGMAIALVVPFKKKI 612
            G +P SL  H N +   F F V EDGAP+P + S +SV   L LGY D+ TDV   +SY Q +        W   L ++FI+ PAL +   + RR    RR+ VALQLG+L  A  S+   SYS VL +LRV++ L++S+P L+LQ Y LL+  ++     L  RL S   S  S++ A T ++ E  LS++      A  SA+    + +VF  V    SV V    R + Q +VW F+ YQ +E+ A+  S+ +LALV   Y  + L WLW +R Y+   LI     + +LR R+  R+VGMPFMDSV+D    Y + CALT VE +  LT GN      G +    L   + RV+T V+ +   GK+ +   +V PFK+ +
Sbjct:   29 GEVPKSLLDHPNRKGGAFQFHVTEDGAPVPGYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADH------MWWFALGMIFIIGPALFAAIVLLRREHWLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDNDGTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLAPTADAA--SASCPGLTGLVFGAVPANSSVAVYRS-RWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVLRRLIA---GEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQ----LPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFKRVV 396

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5JJ93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 2.730e-38
Identity = 137/408 (33.58%), Postives = 198/408 (48.53%), Query Frame = 0

Query:  226 LAQNQLLMSGGGIPLSLRKHRNFRRFVFAVLEDGAPIP-----LWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLL-------VSPEHLGLRLFSASVSAISVSLAATSIIVEHPLSQI-------KWARGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHV-----LVDRMRRVFTVVSILFTAGKVGMAIALVVPFK 609
            L  NQL    G IPL L+K  +F +F+  +  +G P+P     L   K  +VP + LGY DL +D+ TA+SY + +     G      L L F L PA++  AF    +   RR  VA QL LLAEA  + ++  YS VL  +RVI  LF+S+P LLLQ + +L        +   L  R+ S  +SA S++ AAT +     LS         ++     +PS T      VVFS V   G+  +RG   VHP+ +VW  + Y  +E+ AR   +A+L  V   +   VLV+LW     +   LI   T +E L FR  +R+V MPF+DS++D  +A+ +   LT+VE I  +               HV     L  R R V   V+     GK+ +A   + P K
Sbjct:   20 LHNNQL---SGPIPLELQKLPHFGKFITGIALNGPPLPAVRDPLHAFKILIVPVI-LGYADLASDLYTAVSYYEAKHFVWFG------LGLFFALGPAVIMSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCPCFPSLT-----GVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLW-----VGRGLIVWMTAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVI------------YHVYMNDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLK 395

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: D8LBY3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.920e-38
Identity = 133/398 (33.42%), Postives = 195/398 (48.99%), Query Frame = 0

Query:  236 GGIPLSLRKHRNFRRFVFAVLEDGAPIP-----LWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLL-------VSPEHLGLRLFSASVSAISVSLAATSIIVEHPLSQIKWARG-------VAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHV-----LVDRMRRVFTVVSILFTAGKVGMAIALVVPFK 609
            G IPL ++K   F +F+  +  +G P+P     L   K  +VP L LGY DL +D+ TA+SY +       G      L LVF L PA++   F    +   RR  VA QL LLAEA  +  +  YS VL  +RVI+ LF+S+P LLLQ + +L        +   L  R+ S  +SA S++ AAT +     LS     +          +PS T      +VFS V   G+  +RG   VHP+ +VW  + Y  +E++AR   +A+L LV   +   VLV+LW     +S AL+     +E L FR  +R+V MPF+DS++D  +A+ +   LT+VE I  +               HV     L  R R V   V+     GK+ +A+  + P K
Sbjct:  374 GPIPLEVQKLPRFGKFITGIALNGPPLPAVRGPLHAFKVLIVPVL-LGYADLASDLYTAVSYYEARHFVWFG------LGLVFALGPAVIMSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCPCFPSLT-----GLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLW-----VSRALMVWMAAREVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVV------------YHVYKHDDLPSRARLVLVTVASCCMVGKMCLALVAISPLK 742

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: D8LFI4_ECTSI (Leucine Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 3.440e-38
Identity = 129/396 (32.58%), Postives = 197/396 (49.75%), Query Frame = 0

Query:  235 GGGIPLSLRKHRNFRRFVFAVLEDGAPIP----LWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLV-------SPEHLGLRLFSASVSAISVSLAATSII-VEHPLSQIKWARGVAY--------PSATFWRASTVVFSTVQYVGSVIVRGGFR-VHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHVLVDRMRRVFTVVSILFTAGKVGMAIALVVPFK 609
            GG IP  L +H  F++F+     DG P+P       + + ++  +ALGYLDL +D+ TA+SY         G  +  +L + F L PA++  AF     +  RR  VA QL LL EA  S   ++YS VL  +RVI+ LF+S+P LLLQ Y +L+       S   L  R+ S  +S +S++ AAT +  VE  L+      G           PS T      +VFS V   G   + G    VHP+ +VWF   Y  +E+++R   + ++ALV   +  +VL +LW +R  +  A    G      RFR  +R+V MPF+DS+LD   A+     LT+VE +A +   +         ++  L    R   T++SI    GK+ +A+  ++P K
Sbjct:  157 GGEIPKRLAEHPRFKKFIVGRAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNS------GHLFWFVLVVAFALGPAVIVSAFFLPEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPDCPSVT-----ALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYSGEATMGFRFR--VRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLF-------SSDHLPPHARWTLTIISICCMVGKMRLALLAIIPLK 532

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5K7Q2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.170e-28
Identity = 117/393 (29.77%), Postives = 181/393 (46.06%), Query Frame = 0

Query:  235 GGGIPLSLRKHRNFRRFVFAVLEDGAPIP----LWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLV-------SPEHLGLRLFSASVSAISVSLAATSIIVEHPLSQIKWA------RGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFR-VHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHVLVDRMRRVFTVVSILFTAGKVGMAIALVVPFK 609
            GG IP  L +H  F++F+     DG P+P       + + ++  +ALGYLDL +D+ T  +      E   GR                              R  VA QL LL EA  S   ++YS VL  +RVI+ LF+S+P LLLQ Y +L+       S   L  R+ S  +S +S++ AAT +     L   + +      R    P   F   + +VFS V   G   + G    VHP+ +VWF   Y  +E+++R   + ++ALV   +  +VL +LW +R  +  A    G      RFR  +R+V MPF+DS+LD   A+     LT+V+ +A +   +     SG    H      R   T+++I    GK+ +A+  ++P K
Sbjct:   86 GGEIPKRLAEHPRFKKFIVGRAMDGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYTPTTIQATYFEFTCGR------------------------------RFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCPF--ITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRCLVVWAAAYWGEATMGFRFR--VRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFS--SGHLPPHA-----RWTLTIIAICCMVGKMRLALLAILPLK 437

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5KD04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.050e-28
Identity = 106/342 (30.99%), Postives = 178/342 (52.05%), Query Frame = 0

Query:  236 GGIPLSLRKHRNFRRFVFAVLE-DGAPIPLWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFR----RLSLP--RRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLV---SPEHLGLRLFSASVSAISVSLAATSIIVEHPLSQIKWARGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYI----------SNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETI 557
            G IP  +   R F +F   VL+ + + +P      +V+  +  GYLDL++D+ TA+SY +       G ++   L L F L P +++  F       R+ +P  RR+ VA QL LL EA+++  ++ ++ +L  +R+I++LF+S+P LLLQ Y  L+   SPE   LRL S  +SA S++  AT +     L +              W    + FS V   GS  + G   VHP+ +VW  + Y  +E+++R   +A+LALV   +  +VL +LW +R+ +          S         ++++  R  +++V MPF+DSV+D  +A+ L   +T+VE I
Sbjct:   34 GPIPTEVVNLRYFDKFNTGVLDAESSRLP----TGTVMLQVFFGYLDLVSDLYTAVSYYES------GDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWSSPERNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPLEGGICPCCSWLTG-LPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFI 364

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5JL60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.930e-26
Identity = 96/266 (36.09%), Postives = 140/266 (52.63%), Query Frame = 0

Query:  306 SVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGY-MLLVSPE------HLGLRLFSASVSAISVSLAATSIIVEHPLSQI-------KWARGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETI 557
            S +  L F L PA++   FV   +   RR  VA QL LLAEA+ +   Q YS VL  +RV++ LF+S+P LLLQ Y ML + PE       L  R  S  +S  S++ AAT +     L          ++  G    S T      +VFS V   G+  ++G   VHP+ +VW    Y  +E++AR   +A+L LV   + L+VLV+LW +R      ++ V   +E L FR  +R+V MPF+DS++D  +A+     LT+VE I
Sbjct:    8 STLRWLFFALGPAVIVALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERLLTCGGGSDCERFRLGPCCSSLT-----GLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSR------VLMVRVTREGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFI 262

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5JCI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE)

HSP 1 Score: 98.2 bits (243), Expect = 3.040e-18
Identity = 95/345 (27.54%), Postives = 161/345 (46.67%), Query Frame = 0

Query:  279 YLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLV--SPEHLGLRLFSASVSAISVSLAATSIIVEH------------PLSQIK-WARGVAYPSATF-----WRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATR--------WYISNA---LIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVETIAFLTAGNSIPALSGEETAHVLVDRMRRVFTVVSIL 592
            YLD+ TD+ T+ +Y Q          W   L LV  L P ++   F    +   RRL V LQL +L EAF +   + YS+ L  +RV++ LF++   LLLQ + +LV  + E      F A   ++ +S+ + S  V              P+  +  W    + PS  +     W  + + FS     G + +    ++HPQ  VW    Y  +E+++R   +A L L+   + + VLV+ W ++        W   +    L     E  +LRF+  +RVV MPF+DS++ +  A+ +   LT +E + + T  +  P  S E  +H   D++  VFT+++ +
Sbjct:   19 YLDIGTDIYTSYTYFQPGHV-----VWGT-LGLVIALLPGIIEALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAAATPVGDVSNWCSRCSRPSCCWPTWCPWSGTRLPFSRAPTKGELNLGCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTRPWFIGVLVYFWLSQAALVGWMAWQTDDRRSRLNAARDEFSSLRFK--VRVVAMPFLDSIISQEEAFVVGLWLTDLEFVVYTTLYHVYP--SDEVASH---DQL--VFTIIAAI 348

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BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.730e-12
Identity = 80/304 (26.32%), Postives = 136/304 (44.74%), Query Frame = 0

Query:  258 DGAPIPLWM----SKRSVVPALALGYLDLLTDVLTALSYSQEEEEKRMGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQSFREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLVSPEHLGLRLFSASVSAISVSLAATSIIVEHPLSQIKWARGVAYPSATFWRASTVVFSTVQYVGSVIVRGGFRVHPQDYVWF--FIAYQAMELIARLGSIAVLALVAEFYVLVVLVWLWATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCALTVVE 555
            DG P+P       +K+ +V  ++LGY DL++D+ TA+ Y + +     G      L L F L PAL++  F        RR+ VA  L L+ EA+ +  ++ YS VL  +RV++ LF+S+P LLLQ Y +L+                       T  ++ H     +                         VGSV +      +    V    F+A Q  E ++   S+A+   V   +  +VL++LW +R      ++ +   + +L FR  +R+V MPF DS++D    ++ +   T++E
Sbjct:   46 DGPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGG------LGLAFALGPALITSIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILW---------------------TETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFLATQTGE-VSYFVSLAMFFTVIRKWSSLVLLYLWMSR----GVIVXIWASKTSLDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLE 317

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig67.17721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7FJQ6_ECTSI	3.010e-121	53.38	Hypothetical leucine rich repeat protein n=2 Tax=E...	[more]
A0A6H5JIQ5_9PHAE	2.560e-52	38.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJ93_9PHAE	2.730e-38	33.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LBY3_ECTSI	2.920e-38	33.42	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
D8LFI4_ECTSI	3.440e-38	32.58	Leucine Rich Repeat protein n=1 Tax=Ectocarpus sil...	[more]
A0A6H5K7Q2_9PHAE	1.170e-28	29.77	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KD04_9PHAE	5.050e-28	30.99	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JL60_9PHAE	1.930e-26	36.09	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JCI0_9PHAE	3.040e-18	27.54	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K6W6_9PHAE	1.730e-12	26.32	HTH psq-type domain-containing protein n=1 Tax=Ect...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 170..194 e-value: 32.0 score: 9.1 coord: 122..146 e-value: 4.3 score: 16.3 coord: 98..121 e-value: 39.0 score: 8.4 coord: 50..74 e-value: 330.0 score: 0.8 coord: 218..241 e-value: 130.0 score: 4.2
IPR018629	XK-related protein	PFAM	PF09815	XK-related	coord: 273..414 e-value: 9.6E-9 score: 34.7
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 99..159 e-value: 1.1E-7 score: 31.5
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 37..259 e-value: 1.1E-63 score: 217.5
None	No IPR available	PANTHER	PTHR46662	FAMILY NOT NAMED	coord: 139..248
None	No IPR available	PANTHER	PTHR46662:SF6		coord: 40..231
None	No IPR available	PANTHER	PTHR46662:SF6		coord: 139..248
None	No IPR available	PANTHER	PTHR46662	FAMILY NOT NAMED	coord: 40..231
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 361..384
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 607..680
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 586..606
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 476..502
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 304..326
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 414..432
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 544..566
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 457..475
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 293..303
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 503..543
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 271..292
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 327..360
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 385..389
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..270
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 390..413
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 567..585
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 433..456
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 22..268
None	No IPR available	TMHMM	TMhelix		coord: 304..326
None	No IPR available	TMHMM	TMhelix		coord: 479..501
None	No IPR available	TMHMM	TMhelix		coord: 586..608

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig67	contig	F-serratus_M_contig67:532741..538023 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig67.17721.1	mRNA_F-serratus_M_contig67.17721.1	Fucus serratus male	mRNA	F-serratus_M_contig67 532510..538827 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig67.17721.1 ID=prot_F-serratus_M_contig67.17721.1|Name=mRNA_F-serratus_M_contig67.17721.1|organism=Fucus serratus male|type=polypeptide|length=681bp
MPKRIQLIMAFRMTVTESFRPFDGILFNYVLGAATWCVRAGTFPKDLCQL
DALQELVLHTNRISGVLSPHLRNLRALEVLDLWDNFLEGPIPVEIAELRE
LRELHLSGNFFTGLIPKELGRLSKLTVLFLHGNKLEGTIPPELGQLRRLQ
KLVLINNRLTGTIPVELAKLKSLVDLNLANNRLSGPIPAELGQLSNLMRL
YLWGNNLSGSIPEELGKLSLLERLDLAQNQLLMSGGGIPLSLRKHRNFRR
FVFAVLEDGAPIPLWMSKRSVVPALALGYLDLLTDVLTALSYSQEEEEKR
MGRAWSVMLALVFILAPALVSGAFVFRRLSLPRRLAVALQLGLLAEAFQS
FREQSYSQVLVALRVIQSLFQSLPMLLLQGYMLLVSPEHLGLRLFSASVS
AISVSLAATSIIVEHPLSQIKWARGVAYPSATFWRASTVVFSTVQYVGSV
IVRGGFRVHPQDYVWFFIAYQAMELIARLGSIAVLALVAEFYVLVVLVWL
WATRWYISNALIGVGTEQENLRFRALLRVVGMPFMDSVLDRPSAYKLSCA
LTVVETIAFLTAGNSIPALSGEETAHVLVDRMRRVFTVVSILFTAGKVGM
AIALVVPFKKKIGKIAPAETGELRMDNDEESSSRVTSSRGGSGGNKGGNI
GTRTVASIEEDDESDEDENKVFASSGTLCR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR018629	XK-rel
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf