mRNA_F-serratus_M_contig1235.1770.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1235.1770.1
Unique NamemRNA_F-serratus_M_contig1235.1770.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A6H5KWP2_9PHAE (DUF2407_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP2_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 2.860e-65
Identity = 144/320 (45.00%), Postives = 161/320 (50.31%), Query Frame = 1
Query:  463 MLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXX----------------------------------------------------------------------------------------------------------------PSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGLDG--TGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSEADKE 1080
            MLNPDE+L+KDFGLTENCYVHCV+TAAPPRL+LPSLTPEQA E                                                                                                                       P+TRRGFD LRNNGMTRGEVTAIRGYFSA+VR+                   VE+EE WMRAQPATSEFALNVSMARR  G G TL GLDG     SGG RDF+FGFAMG+FLG IMLLW+WE+AVPRRQKLGILAGVTF+Q++ M+QAA N   + E
Sbjct:    1 MLNPDEALIKDFGLTENCYVHCVITAAPPRLRLPSLTPEQAAEEASGNPGETSEVLLLTGGKERHLLLCTSCCIHLRGVSFWRSDTGRDGGPSSLSLVRRRGRFDASILSACLRIHQTRFDNRTGRFYGSLDKCRGGRYRRDLRGQAERRLESETEEVEDDDPATRRGFDALRNNGMTRGEVTAIRGYFSAQVRE-------------------VESEELWMRAQPATSEFALNVSMARRTTGPGGTLTGLDGFDDAGSGGTRDFMFGFAMGAFLGVIMLLWLWEAAVPRRQKLGILAGVTFKQTVQMVQAAANRRDEDE 301          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A835Z7C3_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7C3_9STRA)

HSP 1 Score: 178 bits (451), Expect = 3.100e-46
Identity = 126/328 (38.41%), Postives = 168/328 (51.22%), Query Frame = 1
Query:  283 ESGDSGAPGNSINVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASP-APDREG----------------QTDWDRQVEAEE-----------------------------------------RWMRAQPATSEFALNVS-----MARRGMGRGDTLAGLDGTGPS---GGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSE 1068
            E GD  A  ++  +++KT  DG+EY+V ++   +VAQ K+ V   IGAEGKYLR+IA+GKML PD + +  F + +  +VHCVV+++ P+             XXXXXXXP+ RRGFD LR+ GMTR EV A+R YFS +V  F  A+P AP                    ++ WDRQ+ AEE                                          WM AQ A+SEFALN +     M   G+      A  D    +   G  RDF+FGF MG FLGFIML W+WE  VP RQK GI+AGV F   +N+ Q  + ++
Sbjct:   32 EGGD--ATAHTFTLKIKTTTDGKEYKVDASNVVSVAQLKDRVRAAIGAEGKYLRLIASGKMLAPDTAALAAFKVPDQSFVHCVVSSSAPQASAXXXX-XXXXXXXXXXXXPAARRGFDRLRSEGMTRAEVIAMRSYFSEQVNTFLEATPPAPQAAAGXXXXXXXQLSAAAAAESQWDRQLRAEEVGLGDVMMLIKLIMXXXXXXXXXXXESECNGQLHEEEAGSVAWMAAQSASSEFALNTARRTAAMREGGLPMAQVWASSDDEMENPEIGTSRDFVFGFIMGGFLGFIMLFWLWEPNVPHRQKGGIVAGVMFNLLINLWQHRVRTD 356          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A7S2SSC9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSC9_9STRA)

HSP 1 Score: 152 bits (385), Expect = 1.210e-37
Identity = 101/284 (35.56%), Postives = 148/284 (52.11%), Query Frame = 1
Query:  232 ENVGDIEQGSVCPKSSVESGDSGAPGNSINVRVKTAGDG---REYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAR----EXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPD---REGQTDWDRQVEAEERWMRAQPATSEFALNVSM----------ARRGMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVT 1023
            + VG  E G  C       G+ GA  N++ +RVKTA  G    E+ V++ L   V + K  V  V+GA+GKYLR+I +G+ML P  + +  F L     +H VV+ APPR   PS    +AR    +          R GFD LRN G+TR  V ++R YF+++V ++A +  +P    ++G+T+  R++  E+ W+ AQ    EFA N             A  G G G     +      G  RDF++GF +G F G IML W+WE     RQK+GI+AG++
Sbjct:    2 DTVGTGEAGGACTPEQHGRGEGGA--NAVRLRVKTANHGDVNAEHWVTARLGDPVDRLKRRVEEVVGAQGKYLRLICSGRMLAPPTAPLSSFKLKNEDVIHAVVSDAPPRNSYPSGPTSEARVADSDSDEEEGGAGRRLGFDALRNRGLTRSGVESLRAYFASQVDEYARSQGSPLFDLQDGETEQHRRLRWEDAWIHAQSEHGEFAANFMPDPFAAPENMDATSGEGWGQVNDEVGSPLEEGSYRDFVWGFFLGFFFGVIMLFWLWEHG-SYRQKMGIMAGIS 282          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: W4HE28_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE28_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.920e-34
Identity = 96/257 (37.35%), Postives = 140/257 (54.47%), Query Frame = 1
Query:  301 APGNSI-NVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDT------LAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQ 1050
            AP  SI N+RVKT  + +   +  + TA+V + K+ +     AEGK+LR+I  GKMLN D++ +    + +N ++HC ++ APP+  +  +T +Q          P+ RRGFD LR+  ++R +V A+R +F  +V    + S A  REG++  DR    EE WM AQ   SEFALNV      M   D+      +  +      G   D ++G AMG  LGF ML  +WE  +PRRQKLGI+ GV     LN +Q
Sbjct:   25 APAVSILNLRVKTLSE-KPLNIDISATASVGELKDMIKAKGEAEGKFLRLIHQGKMLNDDKAALLSCNIKQNDFIHCAMSNAPPKSLVQQMTHQQEEAALDE---PTHRRGFDCLRDT-LSREDVQALRLHFYPQVSTMISQSVA--REGESVEDRIYRIEEEWMAAQGPQSEFALNVRPRGGPMTIHDSAHHRIDMPDMSSVDNEGTTVDMVWGVAMGFVLGFFMLFLLWERTIPRRQKLGIVIGVAINLLLNFMQ 274          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A024USD5_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USD5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.360e-32
Identity = 95/259 (36.68%), Postives = 138/259 (53.28%), Query Frame = 1
Query:  316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNV--------------SMARRGMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQ 1050
            + +RVKT  + +   +    TATV   K+ +     AEGK+LR+I  GK+LN D++++    +  N ++HC +++ PP+  +  +T +Q          P+ RRGFD LR+  +TR EV A+R +F  +V    + S A  REG++  DR    EE WM AQ   SEFALNV              S+ R  M     +  +D  G +    D I+G AMG  LGF ML  +WE ++PRRQKLGI+ GV     LN +Q
Sbjct:   31 LTLRVKTLSE-KPLNIDINATATVGDLKDMIKTKGHAEGKFLRLIHQGKLLNDDKAVLLSSNVKNNDFIHCAMSSVPPKSLVQQMTHQQ---DDVASDEPNHRRGFDCLRDT-LTREEVQALRLHFYPQVSAMISQSVA--REGESVEDRIYRVEEEWMAAQGPQSEFALNVRPRGGHITMESFHDSIHRIDM---PDMPLIDNEGTT---VDMIWGVAMGLILGFFMLFLLWERSIPRRQKLGIVVGVAINLLLNFMQ 276          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A485KRF4_9STRA (Aste57867_10619 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRF4_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.160e-32
Identity = 94/262 (35.88%), Postives = 136/262 (51.91%), Query Frame = 1
Query:  316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPE----------QAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGLDGTGPS-------GGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQ 1050
            +++RVKT  + +   +    TA+V + KE +     AEGK+LR+I  GKMLN D+  +    + +N ++HC ++ APP+  +  +             Q  +       P  RRGFD LR++ ++R EV A+R +F  +V    + S A  REG++  DR    EE WM AQ   SEFALNV      M   D++  +D    +       G   D ++G AMG  LGF ML  +WE  +PRRQKLGI+ GV     LN LQ
Sbjct:   31 LHLRVKTLSE-KPLNIEINATASVGELKEIIKTKSNAEGKFLRLIHQGKMLNDDKVCLLTCNIKQNDFIHCAMSNAPPKSIVQQVWSSCAMFFPHKALQLNQQEEIIEEPQHRRGFDCLRDS-LSREEVQALRLHFYPQVSAMISQSTA--REGESVEDRIYRVEEEWMAAQGPQSEFALNVRPRAGMMEMHDSMHRIDMPDLALMVAENEGTTVDMVWGVAMGLLLGFFMLFLLWERTIPRRQKLGIVVGVAINLLLNFLQ 288          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A7S2BQF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQF9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 8.720e-32
Identity = 98/294 (33.33%), Postives = 150/294 (51.02%), Query Frame = 1
Query:  310 NSINVRVK-TAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRL----QLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQ-----VEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGL-----------DGTGPSGGR----RDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAAL---NSEADKED*FASQVFP 1107
            +SI +R+  ++GD RE  V+  +  TV   K+ VS  +   GK+LR+IAAG+M+ P+++ +  F L     +H V++   PR+    Q+P + PE   +          RRGFD  R++G+TR  V ++R +FS +V QFA  S   +RE  TD + +        E+ W+ A     EF +N+       G  +T   L           D +   GG     RD I+GF MG FLG IML W+WE +V  R K+GIL+GV+ + ++  L+      +S  D  D  A+ V P
Sbjct:   25 SSITLRIMVSSGDVREKEVTVNINDTVESLKKAVSEALCLHGKFLRLIAAGRMITPNDARLNAFPLKSGSVIHAVISTVAPRMEQEVQIP-VAPEPESDSE------EERRGFDRFRDHGVTREGVESLRTFFSDQVTQFAVDSLGVERESLTDMNNRDNPDRARLEDAWIAAH-GQGEFGMNLDSIPNENGVSETAPALTPSLLFSHHTFDNSQEDGGNLGLPRDLIWGFLMGLFLGIIMLFWIWERSVSHRHKMGILSGVSCQLAIRYLKKFFMGHSSFGDWPDQAAADVEP 310          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A5D6XWF0_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWF0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 9.920e-32
Identity = 93/259 (35.91%), Postives = 141/259 (54.44%), Query Frame = 1
Query:  316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARR----------GMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALN 1062
            I V+VKT  + +  RV    +ATV + KE V +  GAEGK+LR+I  GKML+ D + ++   +    ++HC ++AAPP+  +  +    A E        + RRGFD LR+  ++R EV A+R YF  ++  +   S A    G++  DR    EE WM AQ   SEF+LNV  + R          GM      A  +GTG      +F++GF MG  LG  MLL + + +VPR+QK+G+L GV+    L+++  A++
Sbjct:   42 IVVKVKTLSE-KPIRVEILPSATVGELKELVKKQAGAEGKFLRLIHQGKMLSDDRATLESCRVKSEDFIHCAISAAPPKAVVSQMA-AAAAESQDSDREDTNRRGFDRLRDR-LSREEVQALRLYFYPQLSLYI--SQAERVPGESSEDRIYRLEEEWMDAQGPQSEFSLNVVPSARIAIDHQIDMTGMNNSILAADNEGTG-----TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPKAVS 290          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: A0A0P1ADY7_PLAHL (Ubiquitin family n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADY7_PLAHL)

HSP 1 Score: 135 bits (339), Expect = 1.090e-31
Identity = 94/264 (35.61%), Postives = 147/264 (55.68%), Query Frame = 1
Query:  316 INVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRL---QLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARR----------GMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSE 1068
            I ++VKT  + +  RV    +A+VA+ KE V + + AEGK+LR+I  GKML+ D++ ++   + ++ +VHC ++AAPP+    Q+ S   E   +        +TRRGFD LR+  ++R E+ A+R YF  ++  F   S A    G++  DR    EE WM +Q   SEFALNV    R          GM      A  +GTG      +F++GF MG  LG  MLL + + +VPR+QK+G+L GV+    L+++  A++ +
Sbjct:   33 IVLKVKTLSE-KPLRVEIVHSASVAELKELVKKKVNAEGKFLRLIHQGKMLSDDKATLESCKVKDDDFVHCAISAAPPKAIINQVASTAIELEEQDDE-----TTRRGFDRLRDR-LSREEIQALRLYFYPQLSVFI--SRAERIHGESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIATDTQIDINGMSNSILAADNEGTG-----TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRAVSDQ 282          
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Match: G4YL67_PHYSP (Ubiquitin-like domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=G4YL67_PHYSP)

HSP 1 Score: 135 bits (339), Expect = 1.260e-31
Identity = 88/270 (32.59%), Postives = 147/270 (54.44%), Query Frame = 1
Query:  292 DSGAPGNSINVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYLRIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQAREXXXXXXXPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAA-ASPAPDREGQTDWDRQVEAEERWMRAQPATSEFALNVSMARR----------GMGRGDTLAGLDGTGPSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLNMLQAALNSE 1068
            D+ +    I +++KT  + +  RV  A +++V + KE V +   AEGK+LR+I  GKML+ D++ ++   +    ++HC +++APP+  +  +              P+TRRGFD LR+  ++R E+ A+R YF  ++  + + A+  P   G++  DR    EE WM +Q   SEFALNV    R          GM      A  +GTG      +F++GF MG  LG  MLL + + +VPR+QK+G+L GV+    L+++  A++ +
Sbjct:   29 DNNSSSGRIVLKIKTLSE-KPLRVEVAPSSSVGELKELVKKKANAEGKFLRLIHQGKMLSDDKATLESCKVKNEDFIHCAISSAPPKAVVNQMAAAGTDSDPEERDDPATRRGFDRLRDR-LSREEIQALRLYFYPQLSVYISQAARVP---GESSEDRIYRLEEEWMASQGPQSEFALNVVPTARIAMDTQIDMNGMNNSILAADNEGTG-----TEFLWGFLMGLLLGVFMLLMLLDRSVPRKQKVGLLLGVSMNFFLSVVPRAVSDQ 288          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1235.1770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWP2_9PHAE2.860e-6545.00DUF2407_C domain-containing protein n=1 Tax=Ectoca... [more]
A0A835Z7C3_9STRA3.100e-4638.41Ubiquitin-like domain-containing protein n=1 Tax=T... [more]
A0A7S2SSC9_9STRA1.210e-3735.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W4HE28_9STRA3.920e-3437.35Ubiquitin-like domain-containing protein n=2 Tax=A... [more]
A0A024USD5_9STRA2.360e-3236.68Ubiquitin-like domain-containing protein n=1 Tax=A... [more]
A0A485KRF4_9STRA3.160e-3235.88Aste57867_10619 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2BQF9_9STRA8.720e-3233.33Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A5D6XWF0_9STRA9.920e-3235.91Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A0P1ADY7_PLAHL1.090e-3135.61Ubiquitin family n=1 Tax=Plasmopara halstedii TaxI... [more]
G4YL67_PHYSP1.260e-3132.59Ubiquitin-like domain-containing protein n=16 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1235contigF-serratus_M_contig1235:29029..34245 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score138.3
Seed ortholog evalue6.3e-30
Seed eggNOG ortholog42099.EPrPV00000018114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ubiquitin family protein. Source PGD
EggNOG OGs1MBBI@121069,28PYT@1,2QWME@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Exons6
Model size2162
Cds size945
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1235.1770.1prot_F-serratus_M_contig1235.1770.1Fucus serratus malepolypeptideF-serratus_M_contig1235 29170..33010 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929152.9324586-UTR-F-serratus_M_contig1235:29028..291691622929152.9324586-UTR-F-serratus_M_contig1235:29028..29169Fucus serratus maleUTRF-serratus_M_contig1235 29029..29169 +
1690962725.9741118-UTR-F-serratus_M_contig1235:29028..291691690962725.9741118-UTR-F-serratus_M_contig1235:29028..29169Fucus serratus maleUTRF-serratus_M_contig1235 29029..29169 +
1622929153.0168567-UTR-F-serratus_M_contig1235:33010..340021622929153.0168567-UTR-F-serratus_M_contig1235:33010..34002Fucus serratus maleUTRF-serratus_M_contig1235 33011..34002 +
1690962726.0324974-UTR-F-serratus_M_contig1235:33010..340021690962726.0324974-UTR-F-serratus_M_contig1235:33010..34002Fucus serratus maleUTRF-serratus_M_contig1235 33011..34002 +
1622929153.034623-UTR-F-serratus_M_contig1235:34161..342451622929153.034623-UTR-F-serratus_M_contig1235:34161..34245Fucus serratus maleUTRF-serratus_M_contig1235 34162..34245 +
1690962726.044204-UTR-F-serratus_M_contig1235:34161..342451690962726.044204-UTR-F-serratus_M_contig1235:34161..34245Fucus serratus maleUTRF-serratus_M_contig1235 34162..34245 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929152.9449434-CDS-F-serratus_M_contig1235:29169..294211622929152.9449434-CDS-F-serratus_M_contig1235:29169..29421Fucus serratus maleCDSF-serratus_M_contig1235 29170..29421 +
1690962725.9859457-CDS-F-serratus_M_contig1235:29169..294211690962725.9859457-CDS-F-serratus_M_contig1235:29169..29421Fucus serratus maleCDSF-serratus_M_contig1235 29170..29421 +
1622929152.965478-CDS-F-serratus_M_contig1235:30718..309191622929152.965478-CDS-F-serratus_M_contig1235:30718..30919Fucus serratus maleCDSF-serratus_M_contig1235 30719..30919 +
1690962725.9950778-CDS-F-serratus_M_contig1235:30718..309191690962725.9950778-CDS-F-serratus_M_contig1235:30718..30919Fucus serratus maleCDSF-serratus_M_contig1235 30719..30919 +
1622929152.977093-CDS-F-serratus_M_contig1235:31920..320371622929152.977093-CDS-F-serratus_M_contig1235:31920..32037Fucus serratus maleCDSF-serratus_M_contig1235 31921..32037 +
1690962726.0044172-CDS-F-serratus_M_contig1235:31920..320371690962726.0044172-CDS-F-serratus_M_contig1235:31920..32037Fucus serratus maleCDSF-serratus_M_contig1235 31921..32037 +
1622929152.9893224-CDS-F-serratus_M_contig1235:32452..325091622929152.9893224-CDS-F-serratus_M_contig1235:32452..32509Fucus serratus maleCDSF-serratus_M_contig1235 32453..32509 +
1690962726.0132358-CDS-F-serratus_M_contig1235:32452..325091690962726.0132358-CDS-F-serratus_M_contig1235:32452..32509Fucus serratus maleCDSF-serratus_M_contig1235 32453..32509 +
1622929153.006005-CDS-F-serratus_M_contig1235:32692..330101622929153.006005-CDS-F-serratus_M_contig1235:32692..33010Fucus serratus maleCDSF-serratus_M_contig1235 32693..33010 +
1690962726.0232975-CDS-F-serratus_M_contig1235:32692..330101690962726.0232975-CDS-F-serratus_M_contig1235:32692..33010Fucus serratus maleCDSF-serratus_M_contig1235 32693..33010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1235.1770.1

>prot_F-serratus_M_contig1235.1770.1 ID=prot_F-serratus_M_contig1235.1770.1|Name=mRNA_F-serratus_M_contig1235.1770.1|organism=Fucus serratus male|type=polypeptide|length=315bp
MMALEEDDPNSSQSSVPLMSRRRVSFSSSSENVGDIEQGSVCPKSSVESG
DSGAPGNSINVRVKTAGDGREYRVSSALTATVAQFKEEVSRVIGAEGKYL
RIIAAGKMLNPDESLVKDFGLTENCYVHCVVTAAPPRLQLPSLTPEQARE
EEEEDDDPSTRRGFDELRNNGMTRGEVTAIRGYFSAEVRQFAAASPAPDR
EGQTDWDRQVEAEERWMRAQPATSEFALNVSMARRGMGRGDTLAGLDGTG
PSGGRRDFIFGFAMGSFLGFIMLLWMWESAVPRRQKLGILAGVTFRQSLN
MLQAALNSEADKED*
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mRNA from alignment at F-serratus_M_contig1235:29029..34245+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1235.1770.1 ID=mRNA_F-serratus_M_contig1235.1770.1|Name=mRNA_F-serratus_M_contig1235.1770.1|organism=Fucus serratus male|type=mRNA|length=5217bp|location=Sequence derived from alignment at F-serratus_M_contig1235:29029..34245+ (Fucus serratus male)
GATAATTTACACATTTCCGTACTCGGTGTTACATTTTGTGGAGGCGAGAT CCAGACTGTGGCGCTTGGCCGCCTGGGTCTCACACCGAGCAGACGCCGAA AGGGCTCTGAGGCGGAAGGAAGCGGTTGGGATACCGCTGGAATGATGGCA CTCGAAGAAGACGACCCCAATTCTTCTCAATCCTCTGTGCCCCTCATGTC CCGTCGGCGAGTTTCCTTTTCGAGTTCTTCTGAAAATGTCGGAGACATCG AACAGGGAAGTGTCTGCCCGAAATCCAGCGTAGAGAGCGGTGACAGCGGA GCACCAGGAAACTCGATCAACGTGCGCGTGAAGACGGCGGGGGATGGAAG AGAATACAGAGTTTCAAGCGCGCTTACAGCAACAGTTGCTCAGGTGAGGA AGGAGGTTGCAACGAGGCGGAGAAGTTTGGTTTCTCACATGGTGCTTGCC TTGTCTTTTCTGCACGTGGCAAATGGTCTGTTGAAGCTGATCACACCAAC GTAGAAATTGAGCCAAGTGTCAAATCGTGAGATGGGCTCGTTATACAGCA AGCCACGCCTCGAAGCCTAGGCAGCGGTGGCTCCAGCTCAATCTGACCGG ATTTGAGGACCGTTTAATACACATCTCGAAACAACATGAAGCAGAGTGCG TGCTTTAGGACCCAATTGCTTTGCTCCTACAGGACTACCAGTACACAACG TACTATGTACAGTATTCAGTAGTATCGCTGGATATCTGTACGTACAGAGT ACAGTACAGTACAGTACCAGATAATGTACTCTACTCTCATGTACTCAGAA GGTCTAGAGGCGCGTTCTAGTTTTGCTATTAAAAAAAGTACGTACTTCTA ACTTGTTACAAGACCACCAGAGTAGAGGTGTTAGGCTCTACAGTACATAC AAGATACTCCGTATAATTTCGAGAGAATCCTCTCGACTTCTCGCGTTATT CGCACTTCTGACGACCGATCACTGTACACTATTACCTGGTATAGAACAAG TCAGAAAGAAGAGATACAGCGCTTGCCACTACTGTACCCCTCAAGAGCGA GCTGAGTAAGCGAGCTGAGTAAGCGAGCTGAGTAAACGTGAAGCACCTCT TGTCGCGTTATTATTAATAGCACTTCTGACGACCGACCAATGTACTTGTA CACAGCTAGAATAGGTCAGAAAGAAGAGATGCACACGCTTGTCACTACCC CTGTAAGAGCGAACTGAGCAAGCATGAAGCAATCGCAAAATGTATTCCTG CTCTTCGTGACAAGGATGGTCCCTCCTCGCAAGCAAACCCTGAACAAATA CTTGGTGTAGTACTACCGTTCGTAGAGTCTCCTCAATGTCCTCGCTATGT ACTGCTGTGCAAGTGTTTGCAGTCATAATGGGGCGTTCTGCAGGGCGAGT TCCAGATGGGTGAGCCTAACCATCGACGCAGGGCCCATGAAGACGTGAAA GGAGGCCGCTGTCTTCTATTTTCGTCAATTGATATTTCGCGTACTGTACC TCCTCTTAGAACGCTGCTACTTGATCCACTGCTATTCCTGTCCAACCCCG GTCTTTCCCTCTCGAGGGGGATGAGCACTGCGCTGCCTCACACGCACCAT AAACAAAAACTAATACCTCGTCTCAGCGGTATCCGCTTCATGCTCAACCT ATGCTCAACCCCTACCCCCCGTGCTCGTAACGATGGACAGTTCAAGGAAG AAGTGTCCCGAGTCATTGGTGCGGAGGGCAAATACCTGAGAATCATCGCC GCGGGGAAGATGCTCAATCCGGACGAATCGCTCGTAAAGGATTTCGGGCT GACCGAGAACTGTTACGTACACTGCGTTGTGACGGCTGCTCCGCCAAGAC TGCAGCTGCCGTCTCTGACGCCGGAACAAGCTCGGGAAGAGGTACGTCTT ATCTTTAGATAGAGAGTAGCGTTCACCAAGATCTTTCTTACATTATGCTG TCGATGCGGTACAGATCCTCGCGGTAAGTGTGCCTCGGTAATGCTATTTG TGTATGTTCAAGGGCGGATAGTCGACACGCTACTCTACGGAGTTGCGATA ATGACAAGTTACTCTTTTCATCACTCACTCCTACTACGAACATTTTTAAA TATCAAAAGTGCGTTATTCGATTTCCTACTTCGTTCCAAGAATTTTGTGT TATATTCCAACTTCGACCGCGGGTTTCGCTGCTGTAATCTCAGTCGCCGT GGTGACGTCACGGGTTTGGGAGGAAAAGGCAAAATTACCAGACGAACTTT GAGAAAAGCGATGGTTAGCCGCAGGTGTAGCTAGCTCCTGTGACGACAGA AGCTTGTTCGAAAATTTTCAATTATGGATAGACTCACAAGAAACTGAACC GTATTTAACGGGTGCTCAGAAGGACTAGGTACGTTCTGTATTTTCTTCAA ACGACAAGCCGCGGCCGCGAGTTAAAGCGGTTCTCGAGGGGTGTCGACTA GCTCCATATATACACGATGCTGCGCCAAATTCCTATCATGCCAAGCAAAA GTTTTTCTGCATTGCGAGGGCGGACTAGGTAAGCGAAGGGTTTGGCTTCA CAAGCTCCGCCTCGCTGAATCTGAGAACTACTTCATGTGTCTTGTGTCTT GCGTGAGGCTTACTGTGTCTGATCGCCCCGACCGCACGAATTAGGAGTTC CTAAAAGCAAGGAATAACGGGTCCATGAATGTGATTGTTGCGCACCCATA CCATGCTCTCGTCTCGCCAGCGTGATTCTGTACCACCGACTTTCTCCGCG GTTCAGTCCTTGGCGACAAATCATCCTCACTCCGAAAAAATGCTTGCTGT TAACGCCAACTTTCTCCCTCCTTCGTTCTGGTAATCTCACACGAGACCGC GTTCATGTATTGGTTCATGTATTGGTAAAATCACACTTTCAGGAAGAGGA GGACGACGACCCGAGCACACGTCGAGGTTTTGACGAACTGAGGAACAACG GTATGACCAGGGGGGAGGTGACCGCAATCCGGGGTTACTTTAGCGCGGAG GTTCGACAGGTGAAAATATATGATATATGATAAGGGAGTCTATAGGAACG CGTTTGGCCGTTGGCCCGCCCCTCAGAGCGTGCCTAATTATGTGTTACGA TATAATTAATGAAAAGACTGCGGCAAAAAAATATTTTTAGATGTCTTTCC GTAGCGGCAAAGGGCCGGCCGTGCGCTTGAGACCGCGGCTGTCCAGCCAA CTCCCATCCTTCTTTTGTATGTTCAGTATCAATCACCTAGACTGTGCCCT TCAAGGGGCCCGCTGCCCTTCAGCATCCAACATTCATTCTTCAAGGACGG GGGGGGGGGGGGGGAGTTAACCCGCGAGATTTTTTCGCCAAGTTCCGTGT CTTTTTACTGCCGTGAGTGTCCATCTCAAGCATACTTTCAACTTTTCGTG TCAATCGCTTCCACGACGACGCAGTTCGCGGCGGCGTCGCCAGCTCCGGA TCGAGAAGGCCAAACGGACTGGGATCGCCAGGTAAGGTTCTCCTTCCTTT CGCGAGGTTTACGAGGACGCGGTCGGTGTGTTGTAACAAGGTACCAAGTA TCAGATTTCTCGGATAAGTTTGTTGCTCGAAGAAGAGGAGCGGTCAGGCT TCACCTTTTCGCGAACTGCATGCACGTTTGTTCCGTTCCTCGCGCTGCTT ACGATGACCGATAGGTCGAAGCAGAGGAGCGATGGATGCGCGCCCAGCCC GCGACGTCGGAGTTCGCGCTGAACGTGAGCATGGCGCGCCGGGGGATGGG ACGAGGTGATACCTTGGCCGGGCTGGACGGAACCGGACCGTCGGGGGGAA GGCGCGATTTTATTTTTGGCTTCGCCATGGGCTCCTTTCTCGGCTTCATC ATGCTCCTCTGGATGTGGGAGAGCGCGGTGCCTCGGCGACAAAAGCTCGG AATCTTGGCGGGCGTCACCTTCAGGCAATCTTTGAACATGTTGCAGGCCG CACTAAACTCTGAGGCTGACAAGGAGGACTGATTTGCATCCCAAGTATTT CCGAGGTGGCGCCCGGGTTGGCGGGATATATGGGTTGGAAGTCCGATATC GCGTTTCGAGGAATCCGCGAGCTGAACGCTACGGTCGACAAGCGGAGAGG TGGTGGAACTGGCGTCGCTAACCCTTCCAATCTTGAGAATGATATCTTGG CGTTCAGAAATGGTGGGGTTAGATACGTCATGAAATGATCTTGGTGGTTT TGCGTGTGAGGGGATAGGGGACCATGCGCCCGAACTCTGTAGAGCGCTTT TGCTCGAGTGGAACTCCCAAGCGTGACTTGCACGGGGGCGATTGTTTGCG GCACCGATACCTCAATCCTGTGCTGCGTTTCCGTCCTACAAAAATTCTAT AGTAGCATTTTCATGCTAATCACAGCATGGTCAGGGGGGTTGTTGAGCTA CTTCTGAAGGGAGGTCGTGTTTATGTTGCGTGCTAAGAACATGTATACTA AAAACTGCTTTCTGATTGCAAGCGTAGGTCGCCCGTGTCACCCCAAATAT CTCGGCACCATACTGCTGTACTGGTACTCGTATCCTGGCTTTGCCCGTAG TGTAGAGCGCTTTTGGTTCAGCTGTTCTTATGTACGAGGCCCTTATCTTG CCCTGATAACAGGATGGTACGCTTTATGGAGGTTTTTTTTCAGTGTACAC GGCTATTCCTGGAGGGGTTTGCAATTGTGCTTGCTTTTTTTGCTGTGCAA TTGAAATTGCGAGGTGTATCGATTAAATAGTTTCGTTGAGGAGTTTGATT CGCAAGAAGTGTATGAAAAATGCGATAGAGCATTTGCGCGGATTCTTTAA TTTTTTGTACGGTGTAAAAAGAAGAAAAAAGAGACCACGCACATAAATTA TACTACACTCGTGTACTGAGGAGGCAACCCCTAGAGGGTACTTTTCGTAT AACGCGTTTGCTTGTACCACTTGTAACGGTTTCCACGTGTGCACAACATA TTTAGCCTATTTAGCCCGAGGATAGCCGAGCCAGCGCATATTCAGCCAGG TTATGGAGATGAGCAGGCTGACGCGGGATGGGACTGCCGAAACCGTCTCG CGAGACCAAATTCTCAGGCACGCACGCGAACAGGGGAATATTATTTTCCT GTTCAGCTGACCACGAGCAGGATTGGCAACCTTATCAGGTTGATCCATAC TCTTGCTATATGTGCGACCATACATAACTTCGCGGGGTCACAAACGCTTC CTGTTACTATATTTTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1235:29029..34245+

>mRNA_F-serratus_M_contig1235.1770.1 ID=mRNA_F-serratus_M_contig1235.1770.1|Name=mRNA_F-serratus_M_contig1235.1770.1|organism=Fucus serratus male|type=CDS|length=1890bp|location=Sequence derived from alignment at F-serratus_M_contig1235:29029..34245+ (Fucus serratus male)
ATGATGGCACTCGAAGAAGACGACCCCAATTCTTCTCAATCCTCTGTGCC
CCTCATGTCCCGTCGGCGAGTTTCCTTTTCGAGTTCTTCTGAAAATGTCG
GAGACATCGAACAGGGAAGTGTCTGCCCGAAATCCAGCGTAGAGAGCGGT
GACAGCGGAGCACCAGGAAACTCGATCAACGTGCGCGTGAAGACGGCGGG
GGATGGAAGAGAATACAGAGTTTCAAGCGCGCTTACAGCAACAGTTGCTC
AGATGATGGCACTCGAAGAAGACGACCCCAATTCTTCTCAATCCTCTGTG
CCCCTCATGTCCCGTCGGCGAGTTTCCTTTTCGAGTTCTTCTGAAAATGT
CGGAGACATCGAACAGGGAAGTGTCTGCCCGAAATCCAGCGTAGAGAGCG
GTGACAGCGGAGCACCAGGAAACTCGATCAACGTGCGCGTGAAGACGGCG
GGGGATGGAAGAGAATACAGAGTTTCAAGCGCGCTTACAGCAACAGTTGC
TCAGTTCAAGGAAGAAGTGTCCCGAGTCATTGGTGCGGAGGGCAAATACC
TGAGAATCATCGCCGCGGGGAAGATGCTCAATCCGGACGAATCGCTCGTA
AAGGATTTCGGGCTGACCGAGAACTGTTACGTACACTGCGTTGTGACGGC
TGCTCCGCCAAGACTGCAGCTGCCGTCTCTGACGCCGGAACAAGCTCGGG
AAGAGTTCAAGGAAGAAGTGTCCCGAGTCATTGGTGCGGAGGGCAAATAC
CTGAGAATCATCGCCGCGGGGAAGATGCTCAATCCGGACGAATCGCTCGT
AAAGGATTTCGGGCTGACCGAGAACTGTTACGTACACTGCGTTGTGACGG
CTGCTCCGCCAAGACTGCAGCTGCCGTCTCTGACGCCGGAACAAGCTCGG
GAAGAGGAAGAGGAGGACGACGACCCGAGCACACGTCGAGGTTTTGACGA
ACTGAGGAACAACGGTATGACCAGGGGGGAGGTGACCGCAATCCGGGGTT
ACTTTAGCGCGGAGGTTCGACAGGAAGAGGAGGACGACGACCCGAGCACA
CGTCGAGGTTTTGACGAACTGAGGAACAACGGTATGACCAGGGGGGAGGT
GACCGCAATCCGGGGTTACTTTAGCGCGGAGGTTCGACAGTTCGCGGCGG
CGTCGCCAGCTCCGGATCGAGAAGGCCAAACGGACTGGGATCGCCAGTTC
GCGGCGGCGTCGCCAGCTCCGGATCGAGAAGGCCAAACGGACTGGGATCG
CCAGGTCGAAGCAGAGGAGCGATGGATGCGCGCCCAGCCCGCGACGTCGG
AGTTCGCGCTGAACGTGAGCATGGCGCGCCGGGGGATGGGACGAGGTGAT
ACCTTGGCCGGGCTGGACGGAACCGGACCGTCGGGGGGAAGGCGCGATTT
TATTTTTGGCTTCGCCATGGGCTCCTTTCTCGGCTTCATCATGCTCCTCT
GGATGTGGGAGAGCGCGGTGCCTCGGCGACAAAAGCTCGGAATCTTGGCG
GGCGTCACCTTCAGGCAATCTTTGAACATGTTGCAGGCCGCACTAAACTC
TGAGGCTGACAAGGAGGACTGAGTCGAAGCAGAGGAGCGATGGATGCGCG
CCCAGCCCGCGACGTCGGAGTTCGCGCTGAACGTGAGCATGGCGCGCCGG
GGGATGGGACGAGGTGATACCTTGGCCGGGCTGGACGGAACCGGACCGTC
GGGGGGAAGGCGCGATTTTATTTTTGGCTTCGCCATGGGCTCCTTTCTCG
GCTTCATCATGCTCCTCTGGATGTGGGAGAGCGCGGTGCCTCGGCGACAA
AAGCTCGGAATCTTGGCGGGCGTCACCTTCAGGCAATCTTTGAACATGTT
GCAGGCCGCACTAAACTCTGAGGCTGACAAGGAGGACTGA
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