mRNA_F-serratus_M_contig67.17717.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI) HSP 1 Score: 341 bits (874), Expect = 2.030e-113 Identity = 162/217 (74.65%), Postives = 189/217 (87.10%), Query Frame = 3
Query: 225 APFQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESDDGCP 875
AP QSG+RSM+T+H+T LMLRAK+V+VGDACVGKT+V+QM KSGGHDYPKNYIMTIGVDF VKQ+K+P+TDC+VELFLFDCPGQGVFNKLEQ GAAYY NAAFVCVVFDVS+RDSFESCGRWLQ VRAALP+ PLPGVVIANK D REGG+++RAVV T+EG FA QN L+YFETSAA KGI+ PF +MA++FH TY++ +EGAE + G P
Sbjct: 14 APSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ---GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHETYEKTIEGAEGEGGLP 227
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE) HSP 1 Score: 279 bits (714), Expect = 2.270e-89 Identity = 132/164 (80.49%), Postives = 149/164 (90.85%), Query Frame = 3
Query: 225 APFQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQ 716
AP QSG+RSM+T+H+T LMLRAK+V+VGDACVGKT+V+QM KSGGHDYPKNYIMTIGVDF VKQ+K+P+TDC+VELFLFDCPGQGVFNKLEQ GAAYY NAAFVCVVFDVS+RDSFESCGRWLQ VRAALPS PLPGVVIANK D REGG+++RAVV T+
Sbjct: 14 APSQSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQ---GAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA) HSP 1 Score: 249 bits (636), Expect = 7.620e-78 Identity = 123/202 (60.89%), Postives = 153/202 (75.74%), Query Frame = 3
Query: 252 METSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAE 857
ME HK +LMLR+K+VIVGDA VGKTA+ QML S GH+YPKNY+MT VDFSVKQ+++P+ +C VELFLFDC GQGVFNKL+ A +++NA+FVCVVFDV +R+SF+SCGRWLQ VRA P+ P+PGV+I +K D REG SRAVV QEG FA++N L YFE SAA+ G+E PFQ+MA FH Y+ + AE
Sbjct: 1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDL---NAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFHTMYEASMRKAE 195
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA) HSP 1 Score: 248 bits (634), Expect = 4.120e-77 Identity = 116/213 (54.46%), Postives = 161/213 (75.59%), Query Frame = 3
Query: 231 FQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESDDG 869
F+S +RSME++HK +LMLR K+V+VGDACVGK+A++QM GG YPKNY+MT GV F VKQ+ IPDT+C VEL+LFDC GQ +FN+ EQ + + N ++V VV+DV +RDSF+SC +WLQ VR+ S +P GV++ANK D REGG++SRA V+ +EG +FA++N LE+FETSAA K ++ PF ++AS FH+ Y++ V+ AE+ G
Sbjct: 25 FKSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKS---WENTSYVVVVYDVGNRDSFQSCAKWLQGVRSTRQSSMIP--GVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQKYEQTVQRAEALSG 232
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.820e-68 Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 3
Query: 234 QSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVE 848
QSG+RSMETSHKT+++LR K+++VGDACVGKTA+ Q SGG YPKNY+MTIG +F+VKQ+ IP+T+ IVELF++DC GQ +FN+L+ + YY NA+ V VV++V++RDS SC +W+ V+A SG VPL G + NK +FR+G +DSRA V E AE + YFETSAA G++ PFQY+A F+R Y+E V+
Sbjct: 2 QSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDL---NSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKAIQNSG-VPLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYRRYEETVQ 202
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA) HSP 1 Score: 214 bits (545), Expect = 4.230e-64 Identity = 108/209 (51.67%), Postives = 148/209 (70.81%), Query Frame = 3
Query: 231 FQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAE 857
+QS +RSME+ H++ILMLR K+V+VGDA VGK+A++ M SGG +PK Y+MT VDF VKQ+ IP++ VEL+LFDC GQ +FN++E A+Y NA+F+C+V+DVS+ SFESCG+WLQ V + PS LPGV+IANK D GG R VV+TQ+G FA N L YFETSA G+ +EPF+++A F + Y++ + A+
Sbjct: 11 YQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANN---AHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEGE-FDEPFRHIAIEFAKKYEDTIAHAQ 209
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A7S0SQ35_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ35_9STRA) HSP 1 Score: 212 bits (540), Expect = 3.820e-63 Identity = 99/207 (47.83%), Postives = 152/207 (73.43%), Query Frame = 3
Query: 237 SGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAE 857
SGIRSM++ HK++ +LR K+VI+GD+CVGK+++LQ+ +SGG YPKNY+MTIG DF+VKQ+ IPDT+ +VEL++FDC GQ +FN+LE + YY NAA V VV+D+ ++++ +S +WL +++A+ S P L GV++ NK D+R+G VDSRA V ++ F++ L YFE SAA G+ EPF ++A+ F++ Y++ + A+
Sbjct: 14 SGIRSMDSKHKSLTVLRCKLVIIGDSCVGKSSLLQVFQSGGTTYPKNYMMTIGADFNVKQVPIPDTNIVVELYIFDCAGQPIFNQLEM---NSKYYENAAAVMVVYDIGNQETLQSTTKWLTGLKSAV-SNPSDLIGVLVGNKSDYRDGSVDSRAEVVKEDAQRFSKDLGLAYFEASAASNIGVTEPFLHVATEFYKKYEDTLRKAD 216
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A1W0A8Y6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8Y6_9STRA) HSP 1 Score: 209 bits (531), Expect = 4.030e-62 Identity = 105/208 (50.48%), Postives = 147/208 (70.67%), Query Frame = 3
Query: 237 SGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAES 860
SG+RSMET+HK+ L+LR K V+VGDA VGKTA+LQ LK+ GH+YPKNYIMT + VK IPDT+ IVEL++ DCPGQ +FN+ E G+ ++ A+ + +VFDV++++SF+SC +W Q V P+ V GV+I NK D +EG D+ + T++ FA+QN L+YFE SA +G IE PF +MA+TF + YD++VE AE+
Sbjct: 2 SGLRSMETTHKSTLVLRCKAVVVGDAGVGKTALLQTLKTNGHEYPKNYIMTSSPELVVKSFPIPDTNVIVELYMLDCPGQSIFNQREF---GSIHFEGASMIILVFDVNNKESFKSCTKWYQVVANPAPNHQVS--GVLIGNKCDEKEGNRDA---ILTKDAEDFADQNNLKYFECSARLGTNIETPFLHMANTFKKKYDDLVERAEN 201
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A067BYM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYM3_SAPPC) HSP 1 Score: 209 bits (531), Expect = 4.030e-62 Identity = 105/209 (50.24%), Postives = 148/209 (70.81%), Query Frame = 3
Query: 237 SGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESD 863
SG+RSMET+H + ++LR K V+VGDA +GKTA+LQ LKS GHDYPKNYIMT + VK + IP+T+ IVEL+L DCPGQ +FN+ E G+ ++ A + +VFDV+S++SF+SC +W Q V A P+ + GV+I NK D +EG D+ ++T+E FAEQN L+YFE SA +G I+ PF +MA+TF + YD++ E AE++
Sbjct: 2 SGLRSMETTHTSTVVLRCKAVVVGDAGIGKTALLQTLKSSGHDYPKNYIMTSSPELIVKSLPIPETNAIVELYLLDCPGQSIFNQREF---GSMHFEGACMIVLVFDVNSKESFKSCIKWYQEV--ANPAPNHQISGVLIGNKADEKEGNRDA---ISTKEAEDFAEQNNLKYFECSARLGTNIDAPFLHMATTFKKKYDDLAERAENN 202
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Match: A0A485KB43_9STRA (Aste57867_2355 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB43_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.210e-61 Identity = 104/211 (49.29%), Postives = 149/211 (70.62%), Query Frame = 3
Query: 237 SGIRSMETSHKTI--LMLRAKIVIVGDACVGKTAVLQMLKSGGHDYPKNYIMTIGVDFSVKQMKIPDTDCIVELFLFDCPGQGVFNKLEQARQGAAYYNNAAFVCVVFDVSSRDSFESCGRWLQAVRAALPSGPVPLPGVVIANKVDFREGGVDSRAVVTTQEGYHFAEQNKLEYFETSAAVGKGIEEPFQYMASTFHRTYDEMVEGAESD 863
SG+RSMET+HK+ L+LR K+++VGD VGKTA+LQ KS GHDYPKNYIMT + VK + I +T+ IVEL++FDCPGQ +FN+ E G+ +++ A+ V VVFDV+S++SF+SC +W Q V A P+ LPGV++ NK D +EG D+ ++ +E FAEQN L+YFE SA +G G++ PFQ+MA F + YD+ E ++++
Sbjct: 2 SGLRSMETTHKSTVRLVLRCKVMVVGDGAVGKTALLQSFKSNGHDYPKNYIMTSNAELYVKPIPIAETNAIVELYMFDCPGQSIFNQREF---GSVHFDGASMVMVVFDVNSKESFKSCTKWYQDV--ANPAPNHQLPGVLVGNKSDNKEGNRDA---ISQKEAEDFAEQNNLKYFECSARLGTGVDAPFQFMAKAFKKKYDDFAERSDNN 204 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig67.17717.1 >prot_F-serratus_M_contig67.17717.1 ID=prot_F-serratus_M_contig67.17717.1|Name=mRNA_F-serratus_M_contig67.17717.1|organism=Fucus serratus male|type=polypeptide|length=231bp MATSPRVLETTAPFQSGIRSMETSHKTILMLRAKIVIVGDACVGKTAVLQback to top mRNA from alignment at F-serratus_M_contig67:314773..317142+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig67.17717.1 ID=mRNA_F-serratus_M_contig67.17717.1|Name=mRNA_F-serratus_M_contig67.17717.1|organism=Fucus serratus male|type=mRNA|length=2370bp|location=Sequence derived from alignment at F-serratus_M_contig67:314773..317142+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig67:314773..317142+ >mRNA_F-serratus_M_contig67.17717.1 ID=mRNA_F-serratus_M_contig67.17717.1|Name=mRNA_F-serratus_M_contig67.17717.1|organism=Fucus serratus male|type=CDS|length=1386bp|location=Sequence derived from alignment at F-serratus_M_contig67:314773..317142+ (Fucus serratus male)back to top |