prot_F-serratus_M_contig67.17715.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig67.17715.1
Unique Nameprot_F-serratus_M_contig67.17715.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length226
Homology
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: D7FJP9_ECTSI (Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJP9_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 7.270e-120
Identity = 173/224 (77.23%), Postives = 197/224 (87.95%), Query Frame = 0
Query:    1 MNGIGAPASAAAERPRHTPLLIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHGREVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTRLELNQAASEAPADGDTLRLNGNRDPSDANATFTEKIESCC 224
            MNG+GAPA   A +P  TPLLIRILMIGDSSVGKTSLVLRYD RGFN +FTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFV+VYDVSNRQSFES++ WMKDI+E GKRGSDV+ICGNKCDL GREVA EEGEQLAA +GVPY+ETSAK+N+NV++TF +LASRVKTRLE +QAA++    G+TLRLNG R+      + T+++ESCC
Sbjct:    1 MNGLGAPAVGGAGKP--TPLLIRILMIGDSSVGKTSLVLRYDKRGFNLRFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVLVYDVSNRQSFESVSTWMKDIVEQGKRGSDVVICGNKCDLQGREVAREEGEQLAAELGVPYMETSAKENLNVEETFGNLASRVKTRLEASQAATDGAGAGETLRLNGGRNGGVDTESLTQRMESCC 222          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A835YM14_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM14_9STRA)

HSP 1 Score: 250 bits (638), Expect = 5.180e-81
Identity = 129/205 (62.93%), Postives = 156/205 (76.10%), Query Frame = 0
Query:   20 LLIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHGREVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTRLELNQAASEAPADGDTLRLNGNRDPSDANATFTEKIESCC 224
            LLIR+LMIG+SSVGKTSLVLRYD RGFN +FTTTIGVDYSDR+L +D R VKLQIWDTAGQERFHSLTTSFFKRAEGF +V+DVS+R+SF+++ARWM DI E GK  SDV++ GNKCD+  R VA  E E+LA +  VPY E SAKDN+NVD  F++LAS VK RL+  +AA EA    +T+ L    +P        +K  +CC
Sbjct:   22 LLIRVLMIGESSVGKTSLVLRYDKRGFNAKFTTTIGVDYSDRMLTVDARAVKLQIWDTAGQERFHSLTTSFFKRAEGFALVFDVSDRRSFDAVARWMGDIREQGKADSDVVLVGNKCDVKERAVAKGEAEKLAKHFAVPYFEASAKDNVNVDVIFETLASSVKRRLDA-KAADEAKKASETVTLGTAAEP--------KKKSACC 217          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A836CM00_9STRA (Rab8D, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM00_9STRA)

HSP 1 Score: 235 bits (599), Expect = 2.020e-75
Identity = 113/165 (68.48%), Postives = 135/165 (81.82%), Query Frame = 0
Query:   26 MIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHGREVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTRLELNQA 190
            MIG+SSVGKTSLVLRYD RGFN +FTTTIGVDYSDR+L +DG+Q+KLQIWDTAGQERFHSLTTSFFKRAEGFV+ +DVS+R SFES+ARWMKDI   GK  SDV++ GNKCD+  R VA EE + LAA   VPY E SAK+++NVD  F ++A+ +K RL+   A
Sbjct:    1 MIGESSVGKTSLVLRYDKRGFNSKFTTTIGVDYSDRMLTIDGKQIKLQIWDTAGQERFHSLTTSFFKRAEGFVLCFDVSDRASFESVARWMKDIEASGKPDSDVVLVGNKCDMKERAVAKEEAQALAAQFRVPYFEASAKEDVNVDAVFSTVANNIKRRLDAKAA 165          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A6V1KKE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KKE1_HETAK)

HSP 1 Score: 207 bits (526), Expect = 4.040e-64
Identity = 99/168 (58.93%), Postives = 131/168 (77.98%), Query Frame = 0
Query:   16 RHTPLLIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHG--REVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRV 181
            +  P +IRILM+GDSSVGKTSLV+R+D++GF  ++ TTIGVDYSDRL+E+DG + KLQ+WDTAGQERF +LT+SFFKRA+GF + YD+S+R SF+++ RWMKDI E    G ++I+ GNKCD+    REVA +EG  LA   G P++E SAK + NVDD F ++AS V
Sbjct:    8 KKQPPIIRILMVGDSSVGKTSLVMRFDDKGFLNKYATTIGVDYSDRLVEVDGDEYKLQVWDTAGQERFRALTSSFFKRADGFCLCYDISSRHSFDNVNRWMKDICEQAPSGFNLILVGNKCDVPEARREVAYQEGVDLAGEFGAPFLEASAKTDRNVDDVFMTVASAV 175          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A7S2AY15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AY15_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.500e-60
Identity = 95/171 (55.56%), Postives = 124/171 (72.51%), Query Frame = 0
Query:   16 RHTPLLIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHG--REVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTR 184
            R    ++RILMIGDS VGKTSLVLRYD   F+ +F TTIGVDY D++++++G+ VKLQIWDTAGQERF SLT++FF RA+G V+ YDVS+R S+E +  WM +I +H     DV+ICG+KCD+    R+V  EEG+ LA + GVPY E SAK N NV+  F  LA+ +  R
Sbjct:   13 REKQQVVRILMIGDSGVGKTSLVLRYDEDAFSHKFVTTIGVDYRDKVVQVNGKSVKLQIWDTAGQERFRSLTSNFFSRADGMVLAYDVSDRTSYEHIKTWMSEIRKHAPEDVDVVICGSKCDIDATDRKVTEEEGQTLAEDEGVPYFEASAKANTNVEAMFMQLATTIVDR 183          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A6S8IR56_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8IR56_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.120e-56
Identity = 93/204 (45.59%), Postives = 135/204 (66.18%), Query Frame = 0
Query:   22 IRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHGREV-AVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTRLELNQAASEAPADGDTLRLNGNRDPSDANATFTEKIESCC 224
            I++LMIGDS VGKT L+LRY N  F+  F TTIG+D+  + +++ G ++KLQIWDTAGQERF ++TTS+F+ A+G ++VYDV++R+SFES+  W+  I +H     + I+ GNKCD+   +V +  EG++LAA  G+P+ E SAK++I VD++F SLA+ VK RL  + A   A   G  L+         A A    K + CC
Sbjct:   12 IKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDIQGTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCDMMDEKVVSTAEGQKLAAEFGIPFAEVSAKNDIKVDESFQSLAAAVKDRLVADGAGGPAKQSGLNLKA--------AQAAGANKNQKCC 207          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A7S2SVP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP5_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.170e-55
Identity = 92/175 (52.57%), Postives = 123/175 (70.29%), Query Frame = 0
Query:    9 SAAAERPRHTPLLIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDL--HGREVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRV 181
            +AA   P+    ++R+LMIGDS+VGKTSLVLRYD   F+ +F TTIGVDY D+++++ G  VKLQIWDTAGQERF +LT +FF RA+G V+ YDVS R SFE + RW + I+E       +++CG KCD     REV+ E+GE LA  + +P+ ETSAK N NV + F +LA+ V
Sbjct:    2 AAAMATPKRK--VVRLLMIGDSNVGKTSLVLRYDENRFSHKFVTTIGVDYRDKVVDIHGANVKLQIWDTAGQERFRALTANFFSRADGIVLAYDVSKRTSFEGVRRWHEQIVEKAAPEVQMLLCGTKCDCSPEEREVSQEDGESLAKELAIPFFETSAKGNRNVAEAFMTLATAV 174          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A7S4JU42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JU42_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.380e-55
Identity = 98/194 (50.52%), Postives = 126/194 (64.95%), Query Frame = 0
Query:    2 NGIGAPAS--AAAERPRHTPL--------LIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHG-REVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTR 184
            NG   P    AAA  P   PL        ++R+LM+GDSS GKTSLVLR+D   F+ +F TTIGVDY D+ + ++G  ++LQ+WDTAGQERF SLT++FF RA+GFV+ YDVSNR SF+ +  WM+DI        DV++CGNK DL   R V+ EEG  LA   GV + ETSA    NV+D F  LA+ +K R
Sbjct:    4 NGSSPPGQGGAAAANPPPRPLQMGAKGAYIVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKTVRIEGAPLRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDVSNRPSFDHVHGWMRDIRTRAPPDCDVVLCGNKSDLDADRVVSTEEGAALAEECGVRFFETSALTGNNVEDMFMDLATAIKRR 197          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: W5NC81_LEPOC (RAB8B, member RAS oncogene family n=24 Tax=Euteleostomi TaxID=117571 RepID=W5NC81_LEPOC)

HSP 1 Score: 185 bits (469), Expect = 1.560e-55
Identity = 85/188 (45.21%), Postives = 133/188 (70.74%), Query Frame = 0
Query:   21 LIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHG-REVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTRLELNQAASEAPADGDTLRLNGNR 207
            L ++L+IGDS VGKT L+ R+    FN  F +TIG+D+  R +ELDG+++KLQIWDTAGQERF ++TT++++ A G ++VYD++N +SFE++  W+++I EH     + +I GNKCD++  R+V+ E GE+LA + G+ ++ETSAK +INV++ F +LA  + TRL      + AP  G  +++  NR
Sbjct:    8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTRLNRKMNDNTAPGGGGPVKITENR 195          
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Match: A0A6T5R664_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T5R664_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.730e-55
Identity = 93/182 (51.10%), Postives = 128/182 (70.33%), Query Frame = 0
Query:   21 LIRILMIGDSSVGKTSLVLRYDNRGFNRQFTTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVVYDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHG-REVAVEEGEQLAANMGVPYVETSAKDNINVDDTFDSLASRVKTR----LELNQAASEAPAD 197
            ++R+LM+GDSS GKTSLVLR+D   F+ +F TTIGVDY D++++++G  ++LQ+WDTAGQERF SLT++FF RA+GFV+ YD+SNR SF+ +  WM+DI        D+++CGNK DL   R V+V+EG+ LA   GV + ETSA    NV+  F +LA+ +K R     E  QAAS A  D
Sbjct:   24 IVRLLMVGDSSCGKTSLVLRFDQNVFSTKFVTTIGVDYRDKMVKIEGAPMRLQLWDTAGQERFRSLTSNFFGRADGFVLCYDISNRPSFDHVIGWMRDIKTRAPPDCDIVLCGNKSDLEADRVVSVDEGKGLAEEYGVQFFETSALTGSNVESMFTALATTIKRRRIDEYEGTQAASVAGGD 205          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJP9_ECTSI7.270e-12077.23Rab8D, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835YM14_9STRA5.180e-8162.93Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A836CM00_9STRA2.020e-7568.48Rab8D, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A6V1KKE1_HETAK4.040e-6458.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2AY15_9STRA3.500e-6055.56Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6S8IR56_9STRA4.120e-5645.59Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2SVP5_9STRA1.170e-5552.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4JU42_9STRA1.380e-5550.52Hypothetical protein (Fragment) n=2 Tax=Odontella ... [more]
W5NC81_LEPOC1.560e-5545.21RAB8B, member RAS oncogene family n=24 Tax=Euteleo... [more]
A0A6T5R664_9STRA1.730e-5551.10Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 63..85
score: 54.09
coord: 125..138
score: 38.79
coord: 159..181
score: 39.04
coord: 22..43
score: 38.84
coord: 45..61
score: 29.08
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 24..185
e-value: 3.2E-10
score: 11.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 22..184
e-value: 3.5E-72
score: 255.8
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 23..184
e-value: 4.4E-34
score: 129.2
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 27..225
e-value: 3.4E-6
score: 36.6
NoneNo IPR availableGENE3D3.40.50.300coord: 11..208
e-value: 9.7E-61
score: 206.5
NoneNo IPR availablePANTHERPTHR24073:SF10coord: 15..182
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 15..182
NoneNo IPR availablePROSITEPS51419RABcoord: 14..224
score: 30.591
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 22..176
e-value: 2.3E-28
score: 97.0
IPR001806Small GTPasePFAMPF00071Rascoord: 23..182
e-value: 3.6E-55
score: 186.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 20..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig67contigF-serratus_M_contig67:219311..232964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig67.17715.1mRNA_F-serratus_M_contig67.17715.1Fucus serratus malemRNAF-serratus_M_contig67 218868..235621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig67.17715.1 ID=prot_F-serratus_M_contig67.17715.1|Name=mRNA_F-serratus_M_contig67.17715.1|organism=Fucus serratus male|type=polypeptide|length=226bp
MNGIGAPASAAAERPRHTPLLIRILMIGDSSVGKTSLVLRYDNRGFNRQF
TTTIGVDYSDRLLELDGRQVKLQIWDTAGQERFHSLTTSFFKRAEGFVVV
YDVSNRQSFESLARWMKDIMEHGKRGSDVIICGNKCDLHGREVAVEEGEQ
LAANMGVPYVETSAKDNINVDDTFDSLASRVKTRLELNQAASEAPADGDT
LRLNGNRDPSDANATFTEKIESCCS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase