mRNA_F-serratus_M_contig67.17712.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig67.17712.1
Unique NamemRNA_F-serratus_M_contig67.17712.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: D7FTL2_ECTSI (WW domain, G-patch, C2H2 zinc finger n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTL2_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 2.550e-157
Identity = 260/329 (79.03%), Postives = 283/329 (86.02%), Query Frame = 3 
Query:    6 QNGWRIIDSSADARPGNSAKVYFNSETGVSTFDKPPELKTSQERQRDGLLADGR---AASMSLTKFDDIDEEDKAGRKTRNFKKNETQGYLDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKARRGKTFNRDKEQRKEWEEMQRRVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPGIAPAEKRTVVKFGLGMKKPGGKTGAFRRR 983
            Q+GWR ++SSADARPG++AKVYFNSETGVSTF+KP ELKT+QER RDG+LA G    A S ++T FDDIDEEDKAGRKTR FK+NETQGY+D +SL++AS+DKPIGEENRGFRLL KMGWK GQGLGAKGDGI  PVV+ +QVATLGLGKSAEDDR+TDEAARERKKLD+EV ET +MKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNH SSYDHHHVKRLKEAAEAEKARRGKTFNRDKEQRKEWEEMQRR++A     XXXXXXXXXXXX               GIAP EKRT VKFGLGMKKP GK G FRRR
Sbjct:    6 QHGWRALESSADARPGSTAKVYFNSETGVSTFEKPEELKTAQERHRDGMLAKGTESSALSRTVTNFDDIDEEDKAGRKTRLFKRNETQGYIDTQSLDAASLDKPIGEENRGFRLLTKMGWKLGQGLGAKGDGITVPVVLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHYSSYDHHHVKRLKEAAEAEKARRGKTFNRDKEQRKEWEEMQRRLKATQAATXXXXXXXXXXXXKLPGALQGDGS----GIAPVEKRTTVKFGLGMKKPAGK-GGFRRR 329
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: A0A7S4DBH5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBH5_HETAK)

HSP 1 Score: 231 bits (588), Expect = 3.990e-68
Identity = 131/229 (57.21%), Postives = 160/229 (69.87%), Query Frame = 3 
Query:   63 KVYFNSETGVSTFDKPPELKTSQERQRDGLLADG------RAASMSLTKFDDIDEEDKAGRKTRNFKKNETQGYLDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVA--TLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKAR 725
            K+Y NS TGV+TFDKP E+K++ E++RD +++ G      RA   S  +  D+D +D    K R +K NET+GYLD+ +  SAS DK I E NRGF+LL KMGWK+GQGLG  G GI  PV +    A  TLGLGK+ E +   D AA++RKKLD EVEET+E   KRL  A +QETIK+ V+EMNKEFYCE C KQYKNV EMSNHLSSYDHHH KR KE   AE+AR
Sbjct:   45 KLYHNSLTGVTTFDKPEEMKSTAEKKRDAIISSGEDMVETRAGLGSFKQGYDLDFDDDMDDKMRVYKVNETKGYLDLSTFESASADKEIPENNRGFKLLVKMGWKRGQGLGKGGKGITAPVQLRPNEAGDTLGLGKAGEYEEKVDTAAKQRKKLDVEVEETDEEVTKRLADAEKQETIKQDVKEMNKEFYCEICDKQYKNVSEMSNHLSSYDHHHTKRFKEMKAAERAR 273
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: A0A835YJV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJV6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.550e-37
Identity = 82/176 (46.59%), Postives = 115/176 (65.34%), Query Frame = 3 
Query:  240 FKKNETQGYLDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKARRGKTFNRDKEQRKE 767
            F + E +  LD    ++  +  PI   +RGFRLL+ +GWK+G+GLG  G GI+EP+ I  +   LGLGK++E D  T EA R RK L +E  E+ E   +R  +  + E  +  V+EMN+ FYCE C KQYK VGE +NHLSSYDHHH KRL +  +A++AR+G  F+RDK ++K+
Sbjct:   50 FARPEPEDLLD----DAPGLHTPIPTTSRGFRLLRLLGWKEGEGLGKNGQGIREPITIREESTGLGLGKASEYDAVTAEATRSRKLLTSEKVESAEEAQRRAAEGAQLEKTRADVREMNRMFYCEDCDKQYKTVGEFANHLSSYDHHHKKRLVDLQKADRARKGSGFDRDKAKKKD 221
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: A0A421F7X3_9STRA (G-patch domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F7X3_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.900e-34
Identity = 73/134 (54.48%), Postives = 92/134 (68.66%), Query Frame = 3 
Query:  300 DKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKE 701
            D+ +   NRG+RLL KMGW+ G GLG    GI EPV +   + TLGLGK+ E D+ T  A  ER+KLD EVEET E  A R  K  +++ +K++++EM K FYC  C KQYK+V EM NHLSSYDHHH KRL+E
Sbjct:    8 DRALDASNRGYRLLMKMGWRSGHGLGKCEQGIVEPVKMKENLVTLGLGKAEEYDQVTQLATSERRKLDVEVEETTEQVAAREAKGAKEQQLKDEIKEMQKAFYCGDCRKQYKSVTEMENHLSSYDHHHTKRLRE 141
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: A0A5J9SCA3_9POAL (G-patch domain-containing protein (Fragment) n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SCA3_9POAL)

HSP 1 Score: 135 bits (341), Expect = 1.210e-32
Identity = 96/232 (41.38%), Postives = 127/232 (54.74%), Query Frame = 3 
Query:   21 IIDSSADARPGNSAKVYFNSETGVSTFDKPPELKT--SQERQRDGLLADGRAASMSLTKFDDIDEEDK---AGRKTRNFKKNETQGYLDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKE 701
            +  S   ARP  S +   ++  G+ +   P  L++  +QE+QR G    G    + L + +D  EE +   + R T N         LD E L  ASV   +   N GFRLL+KMGWK G GLG    GI EP+    + A LG+GK  EDD FT E   +RKKL+ E+EETEE   KR   A R+  I+ +V+E+ K F+C  C KQYK   E  +HLSSYDH+H KR KE
Sbjct:    2 VSTSLPPARPPTSRRARCSATAGLDSASDPDVLRSCGAQEKQR-GKADQGAQGGLDLEEEEDELEEFRLPMSHRPTEN---------LDTEGLEQASVHTQLTASNVGFRLLQKMGWKTGTGLGKNQQGILEPIRADIRDAKLGVGKQEEDDFFTSEENVQRKKLNIELEETEEHIKKREVIAEREHKIRSEVEEIRKVFFCNLCNKQYKLAHEFESHLSSYDHNHRKRFKE 223
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: K3WXR3_GLOUD (G-patch domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXR3_GLOUD)

HSP 1 Score: 132 bits (331), Expect = 3.390e-32
Identity = 75/166 (45.18%), Postives = 105/166 (63.25%), Query Frame = 3 
Query:  297 VDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKARRGKTFNRDKEQRKEWEEMQRRVQ 794
            ++  +   NRGF+LL+KMGW+ G GLG    GI EP+ +   +  LGLGK+ E D   ++A +ER+KLD+EV ET E    RLEKA R + IK  V+ +   F+C+ C KQYK V EM NHLSSYDHHH KRL+E  ++  +       R +EQ+ E   +Q+R++
Sbjct:    1 MEPALDASNRGFQLLQKMGWRNGTGLGKHEQGIVEPIKMKENLVCLGLGKAEEYDAMNEQATKERRKLDSEVVETTEATQVRLEKAARDDQIKSDVKAIESAFFCQDCQKQYKTVKEMENHLSSYDHHHRKRLQELKKSSLSTDELELKRKREQQHEAMVLQKRIE 166
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: A0A3M6VAX2_9STRA (G-patch domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAX2_9STRA)

HSP 1 Score: 131 bits (330), Expect = 5.230e-32
Identity = 84/190 (44.21%), Postives = 115/190 (60.53%), Query Frame = 3 
Query:  240 FKKNETQGYLDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKARRG----KTFNRDKEQRKEWEEMQRRVQA 797
             K NE + Y+          ++ + E NRG+RLL++MGW+ G GLG    GI EP+ +   +  LGLGK+ E D+ T  A   R+KLD E++ET E  A+R  K  ++E +KE+V+ M   FYC  C KQYK+V EM NHLSSYDHHH KRLKE  + +K R G    ++  R+KE   E   +QRR+ A
Sbjct:    1 MKNNENEPYV-------RGTERALDESNRGYRLLRQMGWRSGFGLGKHEQGIVEPIKMKENLVHLGLGKAEEYDKVTHLATSVRRKLDAELQETIEEIARREAKGAKKEQLKEEVKSMQAAFYCCDCRKQYKSVTEMENHLSSYDHHHTKRLKEL-QYQKRRVGTQEKQSVKREKEHEMERLMLQRRIAA 182
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: W7T5T6_9STRA (G patch domain-containing protein 8 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T5T6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 7.080e-32
Identity = 90/219 (41.10%), Postives = 137/219 (62.56%), Query Frame = 3 
Query:  153 LADGRAASMSLTKFDDIDEEDKAGRKTRNFKKNETQGYLDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLG-AKGDGIKEPVVIMSQ-VATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKARRG-KTFNRDKE-QRKEWEEMQRRVQA 797
            + + RA+SM+L           A  +  +FK+ ET GYLD  + + A++D P+ ++NRG +LL KMGWK+   LG A G+G+  P+ ++   +   GLGK  E D   +EA R R+ LD EV+ET  +K +R  KA ++E +K++++ + +EFYC+ CGKQY  V + + HLS Y+H H KRLKEA EA +AR   K  N+ K+ Q +  ++MQRR+ A
Sbjct:   47 ILETRASSMALP----------AATERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAA 255
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: G4ZPZ3_PHYSP (G-patch domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZPZ3_PHYSP)

HSP 1 Score: 130 bits (327), Expect = 1.680e-31
Identity = 70/135 (51.85%), Postives = 88/135 (65.19%), Query Frame = 3 
Query:  297 VDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLKE 701
             ++ +   NRG+RLL KMGW+ G GLG    GI EPV +   +  LGLGK+ E D+ T  A  ER+KLD EVEET E  A+R  +  +QE +K +V+ M   FYC  C KQYK V EM +HLSSYDHHH KRL+E
Sbjct:   16 AERALDASNRGYRLLVKMGWRSGSGLGRHEQGIVEPVKMKENLVCLGLGKAEEYDKVTQLATSERRKLDAEVEETAEQVAEREARGAKQEQLKAEVKSMQAAFYCSDCRKQYKTVTEMESHLSSYDHHHTKRLRE 150
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BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Match: UPI00053C83FD (G patch domain-containing protein 8 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C83FD)

HSP 1 Score: 131 bits (330), Expect = 2.020e-31
Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = 3 
Query:  267 LDIESLNSASVDKPIGEENRGFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDEAARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHLSSYDHHHVKRLK 698
            +D+E++  AS+D  I   N GF+LL+KMGWK G+GLG    GI EP+    +   LGLGK  EDD FT E   +R+KLD EVEETEE+  KR   A R++ I+ +V+E+ K FYCE C KQYK+V E   HLSSYDH+H KR K
Sbjct:   50 VDLENVEQASLDTKISSSNIGFQLLQKMGWK-GKGLGKDEQGITEPIKSGMRDPKLGLGKQEEDDYFTAEENIQRRKLDIEVEETEEIARKREVLAEREQKIQSEVKEIRKVFYCELCNKQYKSVMEFEGHLSSYDHNHKKRFK 192
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL2_ECTSI2.550e-15779.03WW domain, G-patch, C2H2 zinc finger n=1 Tax=Ectoc... [more]
A0A7S4DBH5_HETAK3.990e-6857.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YJV6_9STRA2.550e-3746.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A421F7X3_9STRA1.900e-3454.48G-patch domain-containing protein n=3 Tax=Phytopht... [more]
A0A5J9SCA3_9POAL1.210e-3241.38G-patch domain-containing protein (Fragment) n=1 T... [more]
K3WXR3_GLOUD3.390e-3245.18G-patch domain-containing protein n=1 Tax=Globispo... [more]
A0A3M6VAX2_9STRA5.230e-3244.21G-patch domain-containing protein n=1 Tax=Peronosp... [more]
W7T5T6_9STRA7.080e-3241.10G patch domain-containing protein 8 n=3 Tax=Monodo... [more]
G4ZPZ3_PHYSP1.680e-3151.85G-patch domain-containing protein n=1 Tax=Phytopht... [more]
UPI00053C83FD2.020e-3152.78G patch domain-containing protein 8 n=1 Tax=Tarena... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig67contigF-serratus_M_contig67:150622..156826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score375.2
Seed ortholog evalue2.6e-101
Seed eggNOG ortholog2880.D7FTL2
KEGG koko:K13103
Hectar predicted targeting categoryother localisation
GOsGO:0000349,GO:0000375,GO:0000377,GO:0000390,GO:0000393,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005737,GO:0005739,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0032984,GO:0032988,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0071008,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.spliceosomal complex disassembly
EggNOG OGsKOG2184@1,KOG2184@2759
Ec32 ortholog descriptionWW domain, G-patch, C2H2 zinc finger
Ec32 orthologEc-06_008660.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons8
Model size1318
Cds size810
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig67.17712.1prot_F-serratus_M_contig67.17712.1Fucus serratus malepolypeptideF-serratus_M_contig67 150954..154860 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932053.2243054-UTR-F-serratus_M_contig67:150621..1509531622932053.2243054-UTR-F-serratus_M_contig67:150621..150953Fucus serratus maleUTRF-serratus_M_contig67 150622..150953 -
1690964122.2013295-UTR-F-serratus_M_contig67:150621..1509531690964122.2013295-UTR-F-serratus_M_contig67:150621..150953Fucus serratus maleUTRF-serratus_M_contig67 150622..150953 -
1622932053.376591-UTR-F-serratus_M_contig67:154860..1548931622932053.376591-UTR-F-serratus_M_contig67:154860..154893Fucus serratus maleUTRF-serratus_M_contig67 154861..154893 -
1690964122.286017-UTR-F-serratus_M_contig67:154860..1548931690964122.286017-UTR-F-serratus_M_contig67:154860..154893Fucus serratus maleUTRF-serratus_M_contig67 154861..154893 -
1622932053.3903358-UTR-F-serratus_M_contig67:156190..1562541622932053.3903358-UTR-F-serratus_M_contig67:156190..156254Fucus serratus maleUTRF-serratus_M_contig67 156191..156254 -
1690964122.3071523-UTR-F-serratus_M_contig67:156190..1562541690964122.3071523-UTR-F-serratus_M_contig67:156190..156254Fucus serratus maleUTRF-serratus_M_contig67 156191..156254 -
1622932053.4331713-UTR-F-serratus_M_contig67:156747..1568261622932053.4331713-UTR-F-serratus_M_contig67:156747..156826Fucus serratus maleUTRF-serratus_M_contig67 156748..156826 -
1690964122.3195028-UTR-F-serratus_M_contig67:156747..1568261690964122.3195028-UTR-F-serratus_M_contig67:156747..156826Fucus serratus maleUTRF-serratus_M_contig67 156748..156826 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932053.2452307-CDS-F-serratus_M_contig67:150953..1510921622932053.2452307-CDS-F-serratus_M_contig67:150953..151092Fucus serratus maleCDSF-serratus_M_contig67 150954..151092 -
1690964122.2157075-CDS-F-serratus_M_contig67:150953..1510921690964122.2157075-CDS-F-serratus_M_contig67:150953..151092Fucus serratus maleCDSF-serratus_M_contig67 150954..151092 -
1622932053.259904-CDS-F-serratus_M_contig67:152059..1522171622932053.259904-CDS-F-serratus_M_contig67:152059..152217Fucus serratus maleCDSF-serratus_M_contig67 152060..152217 -
1690964122.228921-CDS-F-serratus_M_contig67:152059..1522171690964122.228921-CDS-F-serratus_M_contig67:152059..152217Fucus serratus maleCDSF-serratus_M_contig67 152060..152217 -
1622932053.2764702-CDS-F-serratus_M_contig67:152698..1528001622932053.2764702-CDS-F-serratus_M_contig67:152698..152800Fucus serratus maleCDSF-serratus_M_contig67 152699..152800 -
1690964122.2397158-CDS-F-serratus_M_contig67:152698..1528001690964122.2397158-CDS-F-serratus_M_contig67:152698..152800Fucus serratus maleCDSF-serratus_M_contig67 152699..152800 -
1622932053.3230968-CDS-F-serratus_M_contig67:153218..1533421622932053.3230968-CDS-F-serratus_M_contig67:153218..153342Fucus serratus maleCDSF-serratus_M_contig67 153219..153342 -
1690964122.2488897-CDS-F-serratus_M_contig67:153218..1533421690964122.2488897-CDS-F-serratus_M_contig67:153218..153342Fucus serratus maleCDSF-serratus_M_contig67 153219..153342 -
1622932053.33691-CDS-F-serratus_M_contig67:154124..1542821622932053.33691-CDS-F-serratus_M_contig67:154124..154282Fucus serratus maleCDSF-serratus_M_contig67 154125..154282 -
1690964122.2650619-CDS-F-serratus_M_contig67:154124..1542821690964122.2650619-CDS-F-serratus_M_contig67:154124..154282Fucus serratus maleCDSF-serratus_M_contig67 154125..154282 -
1622932053.3537903-CDS-F-serratus_M_contig67:154731..1548601622932053.3537903-CDS-F-serratus_M_contig67:154731..154860Fucus serratus maleCDSF-serratus_M_contig67 154732..154860 -
1690964122.2752113-CDS-F-serratus_M_contig67:154731..1548601690964122.2752113-CDS-F-serratus_M_contig67:154731..154860Fucus serratus maleCDSF-serratus_M_contig67 154732..154860 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig67.17712.1

>prot_F-serratus_M_contig67.17712.1 ID=prot_F-serratus_M_contig67.17712.1|Name=mRNA_F-serratus_M_contig67.17712.1|organism=Fucus serratus male|type=polypeptide|length=270bp
MSLTKFDDIDEEDKAGRKTRNFKKNETQGYLDIESLNSASVDKPIGEENR
GFRLLKKMGWKQGQGLGAKGDGIKEPVVIMSQVATLGLGKSAEDDRFTDE
AARERKKLDTEVEETEEMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGK
QYKNVGEMSNHLSSYDHHHVKRLKEAAEAEKARRGKTFNRDKEQRKEWEE
MQRRVQAAAAVVGSGASSGAPPPPPPPPGGAGQQGGAAPGIAPAEKRTVV
KFGLGMKKPGGKTGAFRRR*
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mRNA from alignment at F-serratus_M_contig67:150622..156826-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig67.17712.1 ID=mRNA_F-serratus_M_contig67.17712.1|Name=mRNA_F-serratus_M_contig67.17712.1|organism=Fucus serratus male|type=mRNA|length=6205bp|location=Sequence derived from alignment at F-serratus_M_contig67:150622..156826- (Fucus serratus male)
CCGAGCAAAATGGCTGGAGGATTATCGATTCTTCAGCCGATGCTCGTCCG
GGGAACTCCGCGAAGGTCTACTTCAACAGGTGACTGCTCAACGCCGCAGA
CGGCATGATGTGCAGTAAAGTAAAGTACTCAGAAGTACAGTATCGCAAAT
CTTTCGAGCAAGAACGGCTAGGAATCGTACATCTTCTTAGGCCTCATTAC
GGTACCAATTTGCTGCTTGACTTTAGAACATCAATTGTCGGTCGCTGCGA
AGACATCTTGGTTTCCGACGCCCAAAAGTCTTTGTTGCATTTGCTACTTT
GTGGAGAGCTTGAGTGTAGTTGACAAGCGATTAGCGTCGCAATAATTGAT
GCACGATAATTGTTTGGAACTCCGTCATTTTCGTGCGATAATCGCTCAAT
CGCGTCGCGTTCTGTCGCCTTCACCGAAATACGAGTCCTGCCCTTGTAGA
TTTTATGGGAGGATCATGTTCGGTACCGTTCCCAGCGGTGATATCGTTTA
GACATTTTGGTGAAACTTCAAACTTACACCAGCTCCCTCCTTTTTTACTG
TCACTATTTCACAAACGATCAGCGAGACCGGCGTCTCCACCTTCGACAAG
CCGCCCGAGCTGAAGACATCTCAAGAGAGACAAAGGGTGCGTTCCTTATG
CCCTATAGTTACTGAAGTTACGTCTGTCTTCACGAGCGCTGCTACTGTTG
TTGATAATAACCGGTGTATCCATTGTTCGTAAAATACAGACAGACCGCAC
AAGTGTACATGTAACTTACCATCAATACGTGGTTACTGTAAGTATAACAA
GAAGCCATCACTTGGTACTGTACTTCATACTGGTACACTATATAAAGGAA
AATCTACCGAATTATACAGACAAACTGTAGCACGAACACGAGTACTGCTT
GCATTCCGCTTCGACCAGTAGACAGCCGCGATCTACCTTACACTGTCGAC
GAATCTCGCAGTTCCTCCATAGATCGCCACTCCTTCCGCCCTGTGTAGCA
TTTGCTCAGGAGTTACAAGTGCAAGCAGTGATATGGTGTAACTTTGCTGG
GGGAGCACGATCCGTTACATGTAACACGCGACGAGCTTTTTGCTAGAGGC
CCCCTTTTTTTCTTTTTCTCTTTCTGTTTTGATTTGATGAAAGAAAACTC
AATCAAGAAGCGCTCTGTTTTTTTACTCTCAGAGAGCCACAAGAACAGTG
CGAGTAGTTTATCGCCTTGGTGTACGTGGTCACTTTCCCTAATAAGCTGA
CGAATAATAAGCAGCAGCAGAATAGGCAAAACTAGATCCTTCTTTTAAAA
AATAAACCCGGTTGGATCACAATCATCACATGCTGCTGTAATGTGCTAGA
ATGGGAAAAAGAAAAGGAAAAATCATCACAAATCTGTTGTAATGTGATCA
CCAACAACGATCACCATTGCAGACCAGTAGCACCCACAACAGCATGCCGA
TCGCGGTTGTGTTTCTCCTTGCGCCGGCTGCGGGTGATCGTACATCACGA
TCTGTACAACAGTGTATCGCCGAAAGGTTTCTTGACCTGCCTCGTTGTTT
TGTAGGACGAGCAGTCTAACAGTCGTACTTGTACAGTACACAGCTGAGTG
TCCTGTCTCTTGGCCGCGTCTCGACCGCTGTCCGCTTCTAGAAACTTACT
CCTACGGTGGCGCCGCCGCCCTCCTGCGCCCGGTGGACCCTGAATGAACC
AGAAGAAGAGGACGATACATTTCCTCGCGTTGAGCCTGTTTCAGGAGCAT
GGCCGAAGTCCGGCTGAGCAGAGCTTGCGAGGAACCATGCCACAGCCCGG
CTAGCGGCTCCGCTACAAACAGTAGCCGGCCAGTACCTGCTTCCCAAAGG
CTGTGTTTATCTGCGGTCCTCTATCTACCCTACCCTGTGGTTCTGTACGC
ACGACCGTGTACCGCTGCATACGTCTTACTTAGGATGGACTTCTCGCCGA
CGGAAGGGCGGCCTCCATGTCCTTGACGAAGTTCGATGACATCGACGAGG
AAGACAAGGCCGGCCGCAAGACGCGAAACTTCAAGAAGAACGAGACCCAG
GGCTACCTCGACATAGAGTCATTGAACTCCGCCAGCGTGGATAAGGTATG
GTAAGGGTCGACCCCCCCCCCCCCCCCCTCCAGTCCCCCAGCATTGTATT
TGATGATCATCGGGTTTCCAGCATTGCCGTCTGTTTTTTTCGTAAGCCTG
CTTCTGAGTCATGCAGCTGATCACCACATTCAGCCTGGGTGTGGAGAATG
AGCGGGCTAACGCGAGGTGAAACAGCCGAGCCTATCTCGCGAGACTAAAT
TCTCAGGCGCGAACAGAGAACAGTACTTCATTTTCCCTCGTCGGCTGACC
ACAAGCAGGATTGGCAACCGCAACACGTCTGGCGGCCATTCTACTGAACG
TCACGACTACACACGAAACACACACACACACATGGTTTGAGATTCGAGAT
CACTGTATCAAATGACTCCTTTGTGATGACTGCGATTATCTCTGCGTCGT
GTCTATGTTTCGCTTTCTGTTTCGTTGGGTTTTTACGAGCACAGCCGATC
GGCGAAGAAAACCGGGGCTTCCGGCTGTTGAAGAAGATGGGTTGGAAGCA
GGGGCAAGGGCTCGGCGCCAAGGGCGACGGGATCAAGGAGCCCGTTGTTA
TCATGTCGCAGGTGGCGACGCTTGGCCTGGGAAAGTCAGCTGAAGACGAC
AGGTAGGCGTATTGACGTCGTGGTGAGGAGGCGCTTTGCTTGTTGCATCG
AATAACATATACCCGCCACCCAGAGGTGCTCCCAACAGTCTATCTGTAGG
CTCAATGTAGAAGCCCCTGTGGTGGAGCGGTGGAAGGATCGATTCAAACT
ATTAATACCTCACACGCCATACATCGATCACCCGCTCCGAGCGTGCTCTC
CCCATGGCGACTGGGGTCCATTGCCTCCACGGCAAAGAAAGTTTTTATGT
ATTTTGTACGGAATGCCTCAGATACCACGTGTATCACATATTTCCTCTAC
GTACCAATGGCGGGTGTTGAAAAAGAGAGGCGCACGTTGATTGGTCCATG
AGAGGGCAGCACCCGTTTCTGAAACCGTTACTGAAACTACCTTCAGTACC
ACTGGCCTTGTCCCGGTGGACTTTCGACGGTTAACGCCATCGGTGCGTAG
TTGTGTGACCTGATAAACTCTACCAGGTATTGATAATAGGAACTGACCCG
ATTGCTGTTGGGGGTATATATATATATCAATGCTGTCGTGGAAAGCGGGA
GGAATCCCGTGAGTAAGCACCAGATTCAGCCTGATTGTGAAGAATGGGCA
GGCTGACGCGGGACGGGGCGGCCGAACCCGTTTCGCGAGACCAAATTCTC
AGGCGCGAACGGGGACAGGGGAAAAAACTTTTTTTCTTCCCAGCCGAGCA
CGAGCAGGGTTCGTAACCATATCCGGTTGGTCGATATTCTGCTAAAAGGG
GTGGCCATACACACTGAAATGAAACATGAAACAGGTTCACAGACGAGGCG
GCGAGGGAGAGAAAAAAGCTTGACACGGAGGTGGAAGAGACGGAGGAGAT
GAAGGCCAAGCGGCTGGAAAAGGCTGTGCGGCAGGAGACCATCAAGGAGC
AAGTGCAGGTAGGTAGTGTGCTAGTGTGGGCGTCTGCGTCTTGCGGCAAG
CACCAGCATGATCACGGAACCAACAAAGGCGTAACACCGAAAGCTCGTCG
CCGTGCCTGGTAGGCAACTAGAAGCGCTCAAACATGGACAGGGAAAATAT
AGTTGGGAAAACATTATTTTCCCTGTTCACCTGACCATGAGCATGATTGA
CAACCATACCGGTTGATGCCCAATCTGCTATAGTATGTAATGACGACTAT
GCATACATCCATACTTCCTCCACACCAAAATCTTGAGACTATCGTGTAGA
AGAGTCAGGTATGGAAATCATGTTTTGCGACAATCTACCCGGTAGCACCG
GTTATTTGCGATGTCTTTTGTTAACGTAATATGCATAGCTATGGTACGTT
TGCGGTCGTTGGCATGTATGTTGCAGGAGATGAACAAGGAATTCTACTGC
GAGACATGCGGGAAGCAATACAAAAACGTGGGAGAAATGAGCAACCACCT
AAGCTCGTACGATCACCACCACGTCAAGGTACTTCCGCCGTCAGAGGCGC
TTTCGCCCGTGCAAACAGTTCACGTCGCTTGAGATGGCATGTTTGAATTG
AATGTCTGCGGGGCACGGTAGAAGAACGCCATCGACCGTACAAGATAATA
GATAATGTACAAAAACAGTACCGAACATTGTTTGGTTTGGCCAAAAACAC
TCGCTATTAGTTTGGTTCTACCCGCCCCCTCCCCCTCTCTGCCCAGTGAT
ACATATATACCTGGTATATATATATATATACCCATGAAAATGCTGGTGTT
TGTTCAACACCGCCTTTCGATCAGTGTGGAAACCCTCCTAAGTAAAATGC
CGATTGCACTGTTGTCTCTATCGATGCGCGGGCTAGGCGTGTCTTTTTTT
CTAATAAATGGCTCTCTTCTTACCATTTTTTCATTCACGGTGTGGTCTTC
CCGAACAATCTATATTCCATATATATATATATATATATCACTGCTGTATG
CTGTTGCAGAGGCTGAAAGAAGCGGCTGAGGCGGAGAAGGCGAGGCGAGG
GAAAACGTTCAACCGTGACAAGGAGCAAAGAAAGGAGTGGGAGGAGATGC
AGAGGCGTGTACAGGCGGCGGCTGCGGTGGTGGGGAGTGGGGCGTCATCC
GGAGCGCCCCCGCCACCGTGAGTGCCTTGTTATCTGTTGATGGAAGATTT
CTCTCTATTAAATAAGGTTTTCTGCGTTCTTGCGTTTTTATGTTTTGTTA
CAAATCACTGCGGTTTACTTATCCCAATTTCAATTCTGGGTTAGAATTAT
CACCAATCCATGAATGTATGGTCACACATATAGCAAGAGTATTCTTCCCA
ACCAGGTAAGGTTGCCGATCTTGCTCGTGGTCAGCTGAACAGGGAAAACG
AATGTTTCCCTGTACCCGTTCGCGCCTGAAAAATTGGTCTCGCGAGACGG
GTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCTCAGGCTGAATC
TGGTGCCTACTTACGAAATCCTTCCCAAGTTCCGCGGCGGCGTCCGTTCA
TTTATTTTTTAAACCGCCATACGCCATCGGGCCAGTCCCGCGTTGATCGG
GTCACGCAATTGCGTACCGATAGCTTTCACTGCCGAGAGTCCGCCGGCAC
AGGGCCAGTAAACCTCAAGGTAGTTCCGAACGGGTGCTACCTTGGCAGGT
CACCATGGACCAATTAATATATGCCTGTCTTTCCCACATGCACTATTGGT
GTGAGGTAGGCATGTTGAAAGTACAGTATGTAGTACCGTTGACCACCGTT
TCTTCTTTCGACGGAAGTCAATACGTACCCTTCCGAAGTGTATTGTTTCT
GTGTTGACTGTTAGAAGCGTGAGGCCAGTTTTCCTTTATTTCGTTTTAAT
CCACCACGAAATGTTGACATGTACGACAGCGGCCCAAAAGCTTTCAGTAA
GAGGGTTGTTTTGGTTTTCTCTCTATTTTCACCAGTATTTTCGACCTTTT
CCTCCCTCTATAACACGTTCTCAGGCGAATGCTTTCTAAACTTTTTGCGA
CGTCGTCTCTTTTTTGTTTTACTGGTTTTTATTTTCCCCGTCATTCCCTT
GCCGACACGCCTTCCTCTGTTTTTGTTATCATAGTCCACCACCGCCAGGC
GGGGCGGGGCAACAGGGAGGGGCTGCGCCGGGTATAGCCCCGGCGGAAAA
ACGCACCGTCGTGAAGTTTGGCTTAGGAATGAAGAAGCCGGGAGGGAAAA
CGGGGGCATTCCGAAGGCGATAAATAATTTTACCACCGAGAGATTGCTTG
TGCGTGCACATTGGTACGTACTCGAGTGTGGCGTTGCACCTACTGTACCC
CAGTCGACGAACTCCCAGCGGTACTTGATCAACGACGGCGGCTGAATTGC
CTGTGATGCGACGGTTTTCTGGCTGGAAGGCTAGCCTGGCTAAGTACGTG
CCGTACGTAATTATTTGTATGTGAAGTAATGAAGGCTGAGACTGTAAAGT
GTAGTCGTTGAGTGTCACCCCCCTTCCTTTAATAATAGGTGCAAGTATAC
AGTATCCATTATACAGTATGGTTACTTCGTTGCTTCACGAGGACCCCGGT
TCGGT
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Coding sequence (CDS) from alignment at F-serratus_M_contig67:150622..156826-

>mRNA_F-serratus_M_contig67.17712.1 ID=mRNA_F-serratus_M_contig67.17712.1|Name=mRNA_F-serratus_M_contig67.17712.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig67:150622..156826- (Fucus serratus male)
ATGTCCTTGACGAAGTTCGATGACATCGACGAGGAAGACAAGGCCGGCCG
CAAGACGCGAAACTTCAAGAAGAACGAGACCCAGGGCTACCTCGACATAG
AGTCATTGAACTCCGCCAGCGTGGATAAGATGTCCTTGACGAAGTTCGAT
GACATCGACGAGGAAGACAAGGCCGGCCGCAAGACGCGAAACTTCAAGAA
GAACGAGACCCAGGGCTACCTCGACATAGAGTCATTGAACTCCGCCAGCG
TGGATAAGCCGATCGGCGAAGAAAACCGGGGCTTCCGGCTGTTGAAGAAG
ATGGGTTGGAAGCAGGGGCAAGGGCTCGGCGCCAAGGGCGACGGGATCAA
GGAGCCCGTTGTTATCATGTCGCAGGTGGCGACGCTTGGCCTGGGAAAGT
CAGCTGAAGACGACAGCCGATCGGCGAAGAAAACCGGGGCTTCCGGCTGT
TGAAGAAGATGGGTTGGAAGCAGGGGCAAGGGCTCGGCGCCAAGGGCGAC
GGGATCAAGGAGCCCGTTGTTATCATGTCGCAGGTGGCGACGCTTGGCCT
GGGAAAGTCAGCTGAAGACGACAGGTTCACAGACGAGGCGGCGAGGGAGA
GAAAAAAGCTTGACACGGAGGTGGAAGAGACGGAGGAGATGAAGGCCAAG
CGGCTGGAAAAGGCTGTGCGGCAGGAGACCATCAAGGAGCAAGTGCAGGT
TCACAGACGAGGCGGCGAGGGAGAGAAAAAAGCTTGACACGGAGGTGGAA
GAGACGGAGGAGATGAAGGCCAAGCGGCTGGAAAAGGCTGTGCGGCAGGA
GACCATCAAGGAGCAAGTGCAGGAGATGAACAAGGAATTCTACTGCGAGA
CATGCGGGAAGCAATACAAAAACGTGGGAGAAATGAGCAACCACCTAAGC
TCGTACGATCACCACCACGTCAAGGAGATGAACAAGGAATTCTACTGCGA
GACATGCGGGAAGCAATACAAAAACGTGGGAGAAATGAGCAACCACCTAA
GCTCGTACGATCACCACCACGTCAAGAGGCTGAAAGAAGCGGCTGAGGCG
GAGAAGGCGAGGCGAGGGAAAACGTTCAACCGTGACAAGGAGCAAAGAAA
GGAGTGGGAGGAGATGCAGAGGCGTGTACAGGCGGCGGCTGCGGTGGTGG
GGAGTGGGGCGTCATCCGGAGCGCCCCCGCCACCAGGCTGAAAGAAGCGG
CTGAGGCGGAGAAGGCGAGGCGAGGGAAAACGTTCAACCGTGACAAGGAG
CAAAGAAAGGAGTGGGAGGAGATGCAGAGGCGTGTACAGGCGGCGGCTGC
GGTGGTGGGGAGTGGGGCGTCATCCGGAGCGCCCCCGCCACCTCCACCAC
CGCCAGGCGGGGCGGGGCAACAGGGAGGGGCTGCGCCGGGTATAGCCCCG
GCGGAAAAACGCACCGTCGTGAAGTTTGGCTTAGGAATGAAGAAGCCGGG
AGGGAAAACGGGGGCATTCCGAAGGCGATAATCCACCACCGCCAGGCGGG
GCGGGGCAACAGGGAGGGGCTGCGCCGGGTATAGCCCCGGCGGAAAAACG
CACCGTCGTGAAGTTTGGCTTAGGAATGAAGAAGCCGGGAGGGAAAACGG
GGGCATTCCGAAGGCGATAA
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