mRNA_F-serratus_M_contig67.17710.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A6H5KZK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK4_9PHAE) HSP 1 Score: 137 bits (346), Expect = 1.040e-36 Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 1
Query: 7 GAYGAHGLSKKTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMALLRR 297
GAYGAHGL+ K+DK K+ W TA QYQ+ HALALATLP ++KT ART G+ FT GITLFSGSIY L EDK+A+++AP GG+ +ILGWATMA+L+R
Sbjct: 17 GAYGAHGLAGKSDKIKADWKTATQYQMFHALALATLPIYQKTPARTAAGLFFTTGITLFSGSIYYACLKEDKKASKVAPAGGICMILGWATMAILKR 113
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A835YJ16_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ16_9STRA) HSP 1 Score: 125 bits (314), Expect = 5.740e-32 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 1
Query: 7 GAYGAHGLSKKTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMALLRR 297
GA GAH L KT+K K+ WNTA +YQL+H+LALA LPA++++ ART GVLFT+GI LFSGSIYTY+LT++ + + AP GG+A I GW ++ALL+R
Sbjct: 18 GAIGAHRLKNKTEKEKNDWNTATRYQLIHSLALAVLPAYQRSNARTAAGVLFTSGIILFSGSIYTYILTDNIKMSGAAPLGGMAFIAGWLSLALLKR 114
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: D8LH09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH09_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 3.710e-21 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 1
Query: 7 GAYGAHGLSKKTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIY 198
GAYGAHGLS K+DK K+ W TA QYQ+ HALALATLP ++KT ART G+LFT GITLFSGSIY
Sbjct: 18 GAYGAHGLSGKSDKIKADWKTATQYQMFHALALATLPIYQKTPARTAAGLLFTTGITLFSGSIY 81
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A7S4IW56_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IW56_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 5.470e-18 Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query: 7 GAYGAHGLSKKTDKAKSQWNTAAQYQLLHALALATLPAF---EKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMALLRR 297
GAYGAHGL K + T A+Y L+H+ L P+ +TRA T G T GI LF GS Y +TED+ + AP GGV+LILGW ++ALLR+
Sbjct: 19 GAYGAHGLRGKDQSYVRSYETGARYHLVHSALLVATPSICGGGRTRAATAAGAFLTTGIGLFCGSCYAVGVTEDRAYGKAAPAGGVSLILGWVSLALLRK 118
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A485KYZ3_9STRA (Aste57867_13786 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYZ3_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.570e-17 Identity = 46/96 (47.92%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 7 GAYGAHGLSK--KTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMAL 288
GA+GAHGL K K W+TAA Y L+H++AL +P TR V G L T GI FSGS+YT VLTE K+ + P GG+A I GW + L
Sbjct: 32 GAFGAHGLQTRVKDPKLLKNWDTAAHYHLMHSIALLVVPF---TRRPNVVGGLLTTGIVFFSGSLYTLVLTEQKKLGMITPLGGLAFIAGWLALLL 124
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A1V9ZTF8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTF8_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.110e-16 Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 7 GAYGAHGLSK--KTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMAL 288
GA+GAHGL K K W TAA YQL+H++AL +P R + G L +GI LFSGS+YT VLTE KR + P GG+ + GW ++ L
Sbjct: 30 GAFGAHGLQTRVKDPKLLKTWETAAHYQLIHSVALLAVPF---ARRPNLAGGLIASGIVLFSGSLYTIVLTEHKRLGMITPMGGLMFVAGWLSLLL 122
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A1Z9BRI6_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1Z9BRI6_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.060e-15 Identity = 45/100 (45.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 7 GAYGAHGLSKKTDKAK-SQWNTAAQYQLLHALALATLP--AFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMALLRR 297
GA+GAHGL + + S W TA+QY LLH++ L L A + + + G LFTAG+ LFSGSIY VLTE + + P GG+ LI GW ++ L R
Sbjct: 18 GAFGAHGLRDRVSPEQISAWTTASQYHLLHSVVLLALALYALDAQASIRLQGSLFTAGVVLFSGSIYLLVLTEQRWLGPVTPIGGLLLIAGWGSLLFLAR 117
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A7S3QFL9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QFL9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.590e-15 Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 7 GAYGAHGL--SKKTDKAKSQWNTAAQYQLLHALALATLPAFEKT------RARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMALLRR 297
GAY +HGL +KK++ + T ++YQL+H+ L PA ++ A V G F +GI +FSGS Y L ED+ +LAP GGVALI GW ++ALLRR
Sbjct: 19 GAYASHGLKKNKKSETYAKVFETGSRYQLIHSAMLVATPAICRSGGGKYAMASRVAGACFASGIAMFSGSCYAVGLMEDRSYGKLAPVGGVALIGGWISLALLRR 123
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A6A5C3X0_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C3X0_NAEFO) HSP 1 Score: 82.0 bits (201), Expect = 1.640e-15 Identity = 45/95 (47.37%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 7 GAYGAHGLSKKTDKAKSQ-WNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMAL 288
GA+G HGL + K W TA QY L+H+LAL + KTR V G LFTAGI +FSGS+Y VLT+ K+ + P GG + I GW MA+
Sbjct: 29 GAFGGHGLKRIASPEKIDVWKTAVQYHLIHSLALLAVSQL-KTRHHLVGG-LFTAGIVIFSGSLYALVLTDHKKLGAITPIGGFSFIFGWLAMAI 121
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Match: A0A1W0A5T2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5T2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.830e-15 Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 7 GAYGAHGLSK--KTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTGVLFTAGITLFSGSIYTYVLTEDKRANRLAPTGGVALILGWATMAL 288
GA+GAHGL K K W+TAAQY LLH+ L +P R + G L T GI FSGS+YT VLTE KR + P GG+ + GW + L
Sbjct: 24 GAFGAHGLQNRVKDPKMLKNWDTAAQYHLLHSAVLLAVPF---ARRPNLVGGLITTGIVFFSGSLYTLVLTEKKRLGMITPMGGLMFVAGWLCLLL 116 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig67.17710.1 >prot_F-serratus_M_contig67.17710.1 ID=prot_F-serratus_M_contig67.17710.1|Name=mRNA_F-serratus_M_contig67.17710.1|organism=Fucus serratus male|type=polypeptide|length=100bp DKGAYGAHGLSKKTDKAKSQWNTAAQYQLLHALALATLPAFEKTRARTVTback to top mRNA from alignment at F-serratus_M_contig67:107116..108755- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig67.17710.1 ID=mRNA_F-serratus_M_contig67.17710.1|Name=mRNA_F-serratus_M_contig67.17710.1|organism=Fucus serratus male|type=mRNA|length=1640bp|location=Sequence derived from alignment at F-serratus_M_contig67:107116..108755- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig67:107116..108755- >mRNA_F-serratus_M_contig67.17710.1 ID=mRNA_F-serratus_M_contig67.17710.1|Name=mRNA_F-serratus_M_contig67.17710.1|organism=Fucus serratus male|type=CDS|length=600bp|location=Sequence derived from alignment at F-serratus_M_contig67:107116..108755- (Fucus serratus male)back to top |