mRNA_F-serratus_M_contig667.17672.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: A0A6H5K2G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G8_9PHAE) HSP 1 Score: 213 bits (543), Expect = 9.310e-68 Identity = 99/140 (70.71%), Postives = 121/140 (86.43%), Query Frame = 1
Query: 1 HAVFQGTDSAVVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFLM 420
HAVF+G SAVVLFDGECNFCNSGVWMMISNS+AR++RFCAQN+E+G SLL SFGQ+ ERLSSIA+LDK GHL+TRS A++ I+ARM+ P+P A LLKAVPEP+RD++YG+VSR RH GTES CRIPE+ E+ RF++
Sbjct: 96 HAVFEGAKSAVVLFDGECNFCNSGVWMMISNSEARNLRFCAQNSEMGVSLLHSFGQDQERLSSIAILDKDGHLYTRSCALVHIMARMDFPFPVGAALLKAVPEPLRDAVYGFVSRRRHMFGTESLSCRIPEESEVERFVL 235
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: D7FYZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ6_ECTSI) HSP 1 Score: 163 bits (413), Expect = 1.160e-49 Identity = 77/114 (67.54%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 79 MMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFLM 420
MMISNS+AR++RFCAQN+E+G SLL SFGQ+ ERLSSIA+LDK GHL+TRS A++ I+ARM+ P+P A LLKAVPEPVRD++YG+VSR RH GTES CRIPE+ E+ RF++
Sbjct: 1 MMISNSEARNLRFCAQNSEMGVSLLHSFGQDQERLSSIAILDKDGHLYTRSCALVHIMARMDFPFPVGAALLKAVPEPVRDAVYGFVSRRRHVFGTESLSCRIPEESEVERFVL 114
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: A0A836CDU0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU0_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.170e-28 Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 82 MISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
++++SDA +RF AQ ++ G +L FG L SIAVL + G L T+SAAV+EI RM P+PALA + A+PEP RD++Y WVS R G + CRIPED+E++RFL
Sbjct: 1 VLAHSDADKLRFAAQQSDTGLEILKLFGMEPGELRSIAVLQRSGKLLTQSAAVLEIARRMYQPFPALAEVCSAIPEPARDALYAWVSTQRGVFG-HADSCRIPEDEEMARFL 111
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: UPI0006984491 (thiol-disulfide oxidoreductase DCC family protein n=1 Tax=Aureispira sp. CCB-QB1 TaxID=1313421 RepID=UPI0006984491) HSP 1 Score: 90.9 bits (224), Expect = 9.610e-21 Identity = 45/133 (33.83%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 19 TDSAVVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
TDSA+VLFDG CNFCN V +I +F A +E G +LL + + + L +I ++++ G +T S A + I+ ++ +PWP + + VP +R+ +Y W+S+NR+ + + C +P + +RFL
Sbjct: 3 TDSAIVLFDGVCNFCNQSVQFIIKRDPKGYFKFGALQSESGQALLHQYNLSPDVLDTIVLIEQ-GKAYTYSTAPLRIVRKLRLPWPIFYIFI-LVPTFIRNPIYKWISKNRYKWFGKQEHCMMPTPEIRNRFL 133
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: A0A3N4AUK4_9PSED (Thiol-disulfide oxidoreductase DCC family protein n=3 Tax=Pseudomonadales TaxID=72274 RepID=A0A3N4AUK4_9PSED) HSP 1 Score: 88.2 bits (217), Expect = 1.520e-19 Identity = 43/129 (33.33%), Postives = 74/129 (57.36%), Query Frame = 1
Query: 31 VVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
++LFDG C CN+ +IS+ R R C+ + G LL +G ++R ++ VL + G +S A +++++ + PW AL V+L+ +PEP+RD +Y ++ NR+ L + CR+P D RF+
Sbjct: 18 IILFDGVCKLCNAWANFIISHDYQRVYRLCSVQSASGERLLRQYGYPTDRFETMLVLQQ-GRCSAKSQAFLQVMSGLGWPWRAL-VVLRLIPEPLRDWLYDRIALNRYRLFGKYDYCRLPTPDHAERFV 144
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: A0A3N9UKL6_9BACI (DUF393 domain-containing protein n=1 Tax=Lysinibacillus composti TaxID=720633 RepID=A0A3N9UKL6_9BACI) HSP 1 Score: 87.4 bits (215), Expect = 1.850e-19 Identity = 49/129 (37.98%), Postives = 77/129 (59.69%), Query Frame = 1
Query: 31 VVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
++LFDGEC+FC+ V +I + +F + E G LL + ++ L SI VL + G ++T+S+AV+ I ++N W L V + VP P+R+ +Y V++NRH L +Q CRIP D++ RFL
Sbjct: 4 IILFDGECHFCDRSVQFIIKRDLRKQFKFASIQGEKGQQLLQQH-RVAKTLDSI-VLIEGGKIYTKSSAVLRICKQLNRHWKLLYVFI-IVPSPIRNLVYDLVAKNRHKLNKSNQ-CRIPTKDDLERFL 128
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: UPI000FDB2A9F (thiol-disulfide oxidoreductase DCC family protein n=1 Tax=Paenibacillus koleovorans TaxID=121608 RepID=UPI000FDB2A9F) HSP 1 Score: 85.9 bits (211), Expect = 8.890e-19 Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 1
Query: 28 AVVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
++VLFDGEC+FC+S V ++ A R+ A +E LL + RL SI +L++ G +T S A + I AR WP A L VP P+RD +Y +V+R+R+ C +P D RFL
Sbjct: 7 SIVLFDGECSFCDSSVQFILKRDPAGRFRYAALQSEAARRLLTGHDIDPSRLDSIVLLEE-GRCYTESTAALRI-ARHLQGWPRWAAPLHIVPRPIRDGVYRFVARHRYRWFGRRDQCLLPPPDIRRRFL 134
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: UPI0003F5C8C6 (DCC1-like thiol-disulfide oxidoreductase family protein n=1 Tax=Alteribacter aurantiacus TaxID=254410 RepID=UPI0003F5C8C6) HSP 1 Score: 85.1 bits (209), Expect = 1.690e-18 Identity = 47/129 (36.43%), Postives = 66/129 (51.16%), Query Frame = 1
Query: 31 VVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
V+LFDGECNFC+ V MI R F + +E G +LL + S I + + H RS A + I + PW LA L +P P+RDS+Y ++RNR + + CR+P +E RFL
Sbjct: 4 VILFDGECNFCDGSVQFMIPRDPRRVFSFASLQSEEGQALLKKYDVPRGVDSMILIDEDQEEFHMRSGAALRIARELTRPWN-LAYPLIIIPYPIRDSVYNLIARNRLNWFGKREACRMPTPEERERFL 131
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: UPI00187367C0 (thiol-disulfide oxidoreductase DCC family protein n=1 Tax=Cytobacillus luteolus TaxID=682179 RepID=UPI00187367C0) HSP 1 Score: 84.7 bits (208), Expect = 2.150e-18 Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 1
Query: 31 VVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
++LFDGECNFC+ V +I +F + +E G LL+ + S+ + SI +L + GH + +S+A + I ++ W L + + +P P+RD Y ++RNR+ +++ CRIP +E RFL
Sbjct: 4 IILFDGECNFCDQSVQFIIKRDPKGDFKFASLQSETGKELLSKYNA-SKSIDSI-ILIEDGHCYYKSSAALRICKKLKGAWKLLYLFI-ILPRPLRDFFYDIIARNRYKWFGKNESCRIPSPEERKRFL 129
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Match: UPI001F599349 (DCC1-like thiol-disulfide oxidoreductase family protein n=1 Tax=Bacillus cereus group sp. BfR-BA-01315 TaxID=2920292 RepID=UPI001F599349) HSP 1 Score: 84.7 bits (208), Expect = 2.210e-18 Identity = 42/130 (32.31%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 28 AVVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLLASFGQNSERLSSIAVLDKPGHLHTRSAAVIEILARMNMPWPALAVLLKAVPEPVRDSMYGWVSRNRHALGTESQMCRIPEDDEISRFL 417
+++LFDGECNFCN V +I R+ + +IG +L + +S + SI ++D G+ + +S A+I I ++N PW L ++ K +P+ +R+ +Y ++NR+ L + C++P D RFL
Sbjct: 3 SIILFDGECNFCNQSVQFIIKRDSLGYFRYASLQGDIGKRMLKQYNIDSS-IDSIVLIDN-GNSYIKSDAIINICKKLNGPWKGL-IIFKLIPKSIRNFLYEKFAKNRYKLFGKQTHCKLPSPDIRKRFL 129 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig667.17672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig667.17672.1 >prot_F-serratus_M_contig667.17672.1 ID=prot_F-serratus_M_contig667.17672.1|Name=mRNA_F-serratus_M_contig667.17672.1|organism=Fucus serratus male|type=polypeptide|length=141bp HAVFQGTDSAVVLFDGECNFCNSGVWMMISNSDARSMRFCAQNTEIGNSLback to top mRNA from alignment at F-serratus_M_contig667:154201..155138+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig667.17672.1 ID=mRNA_F-serratus_M_contig667.17672.1|Name=mRNA_F-serratus_M_contig667.17672.1|organism=Fucus serratus male|type=mRNA|length=938bp|location=Sequence derived from alignment at F-serratus_M_contig667:154201..155138+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig667:154201..155138+ >mRNA_F-serratus_M_contig667.17672.1 ID=mRNA_F-serratus_M_contig667.17672.1|Name=mRNA_F-serratus_M_contig667.17672.1|organism=Fucus serratus male|type=CDS|length=846bp|location=Sequence derived from alignment at F-serratus_M_contig667:154201..155138+ (Fucus serratus male)back to top |