mRNA_F-serratus_M_contig664.17645.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig664.17645.1
Unique NamemRNA_F-serratus_M_contig664.17645.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5JS96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS96_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 8.890e-108
Identity = 168/303 (55.45%), Postives = 223/303 (73.60%), Query Frame = 1 
Query:  592 NVCPCGVSVCFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQGHSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDGALVDFLNGPTNDVHLP-GGIEVSSSNLPQECREFGGRKVWARMQKDMLRGRRQLSVADTFEDWMLSFTN-MVAPEFCATFVTNGDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALL 1494
            +VCP G +VC DPH+QGLRGQ I+W+GVDG WY+L+KDD  D+ INVR TAPLP +FPDRQ +T +AVLS+GHS+V+EV+ PYTV T GC   VSPCLA+GGL I VD   VD L   +  V +  G + VSSSNLP EC++FGG ++WARM +DM+ GRR+L   ++ E+W+L + + M AP +CA ++   DL+++QSD A+ +I TPT  VRL+AG+N++  G+ +  GR LP+L+FWQMGVG++GL + + +LSGLLGETAR V D  G  VMEG +A  GTI+DYRVS A    F LL
Sbjct:  103 SVCPPGDAVCGDPHMQGLRGQRIDWSGVDGGWYSLIKDDNIDININVRLTAPLPDEFPDRQLMTSLAVLSKGHSVVIEVENPYTVVTNGCPEGVSPCLANGGLRIIVDSQQVDELLRFSRHVPVADGAMTVSSSNLPVECQQFGGDRIWARMYQDMIEGRRELHGDESLEEWILKYDHGMAAPGWCAKYIAENDLADLQSDHAIFKIQTPTVTVRLNAGVNYQGNGELNWDGRVLPDLEFWQMGVGMDGLDVDNPALSGLLGETARPVYDENGQVVMEGFDAFRGTIEDYRVSDALDVHFPLL 405
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: D8LMW2_ECTSI (Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW2_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.020e-100
Identity = 155/292 (53.08%), Postives = 214/292 (73.29%), Query Frame = 1 
Query:  625 DPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQGHSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDGALVDFLNGPTNDVHLPGG-IEVSSSNLPQECREFGGRKVWARMQKDMLRGRRQLSVADTFEDWMLSFT-NMVAPEFCATFVTNGDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALL 1494
            DPH++GLRGQ I W+GVDG WY+LVKDD  DL INVR TAPLP +FPDRQ +T +A++S+G+S+V+EV+ PYT+ T GC   VSPCLA+GGL I VDG  VD L   +  + +  G + +S+SNLP ECR+FGG ++WARM +D+L  RRQL   ++ E+W+L +  NM A  +CA ++   DL+++Q++ A+ +I TPT  VRL+AG+N++  G+ +  GR LP+L+FWQM VG++GL + + +LSGLLGETAR V    G  VMEG++A  GT++DYRVS A G  FALL
Sbjct:   15 DPHMRGLRGQRINWSGVDGGWYSLVKDDHADLSINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVENPYTIVTGGCPEGVSPCLANGGLRIIVDGQEVDELLRFSRQMPVADGTMTMSASNLPVECRQFGGHRIWARMYQDILEDRRQLRGGESLEEWILRYDQNMPARRWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQGDGELNWDGRVLPDLEFWQMDVGIDGLDVDNPALSGLLGETARPVYGENGEAVMEGSDAFRGTVEDYRVSSALGVHFALL 306
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5JNZ2_9PHAE (VWFA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ2_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 4.200e-99
Identity = 165/303 (54.46%), Postives = 217/303 (71.62%), Query Frame = 1 
Query:  595 VCPCGVSVCFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQGHSLVVEVKEPYTVD-TQGCSN-DVSPCLADGGLSISVDGALVDFLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARMQKDMLRGRRQLSVADTFEDWMLSFTNMVAPEFCATFVTNGDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALLH 1497
            +CP G  +C DPH++GL GQ I+W GVDG+WY+ VKD   DL++NVR TAPLP DFPDRQ +TG++V+S+GHSLV+EV  PY+ D   GC +   +PCLA+GGLS++VDG     L  P     LPGGIEVS+ NLP +C +FGG K+WAR  + +L  RR+L  A +FEDW+LSFT+M A ++C  +++   L+ VQS  A+ +IVTP  VVRL+ GI H+   + D  GR LP+LD WQM VG+ GLSL +E+L+G+LGETAR V D +G+ VM G +A  GT +DYRVSG  G DFALLH
Sbjct:  394 ICPKGSHICDDPHMKGLLGQSIDWFGVDGEWYSFVKDPDMDLRVNVRLTAPLPDDFPDRQLVTGLSVISEGHSLVLEVTNPYSTDLNDGCPDGSPTPCLANGGLSVTVDGEKNVGLIHPIRGEILPGGIEVSADNLPVQCWQFGGHKIWARHYEAIL-ARRKLR-AQSFEDWVLSFTDMAAHDWCTEYISEKGLTGVQSSHAIYQIVTPAVVVRLNVGIGHQDGDEVDWDGRVLPDLDVWQMDVGLTGLSLENEALTGILGETARPVYDEDGHAVMAGDDAYRGTPEDYRVSGPLGMDFALLH 694
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5JP35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP35_9PHAE)

HSP 1 Score: 292 bits (747), Expect = 6.290e-89
Identity = 153/299 (51.17%), Postives = 209/299 (69.90%), Query Frame = 1 
Query:  619 CFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQGHSLVVEVKEPYTVDTQGCSND--VSPCLADGGLSISVDG---ALVDFLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARMQKD-MLRGRRQLSVADTFEDWMLSFTNMVAPEFCATFVTNGDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALLH 1497
            C D +   L GQ I+W G+DG WY+LV+D   DL +NVR TAP P +FPDRQ +TG++V++ GHSLV+EV +PY  DT G   D   +PCLA+GGLS+ VDG   A    L     D  LPGGI+VS++NLP +C +FGG K+ AR   + ++ GRR L +++TFE+W+LSF +M A ++C  ++ + DLS+VQS QA+ +I+TP  VVR + GI H+  G  +  GR +P+LD W+M VG+ GLSL +E+L+G+LGETAR V+D  G  VM+G +A  GT +DYRVSGA GTDFALL 
Sbjct:   54 CTDTYAV-LLGQSIDWFGIDGGWYSLVQDPDIDLNVNVRLTAPPPEEFPDRQLVTGLSVMAGGHSLVIEVTKPYDTDTAGGCPDGAPAPCLANGGLSVIVDGEKEADDSPLLHTIRDETLPGGIQVSAANLPVQCWQFGGDKISARHYANTIMEGRRHL-LSETFEEWVLSFQHMAAHDWCTEYIAHKDLSDVQSAQAIYQIITPEVVVRFNVGIGHQTGGHVEMDGRIVPDLDVWEMDVGLAGLSLENETLTGILGETARPVLDEHGRAVMKGNKAYRGTPEDYRVSGALGTDFALLR 350
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5JP37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP37_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 4.760e-88
Identity = 143/291 (49.14%), Postives = 196/291 (67.35%), Query Frame = 1 
Query:  625 DPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQGHSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDGALVDFLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARMQKDMLRGRRQLSVADTFEDWMLSFT-NMVAPEFCATFVTNGDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALL 1494
            DPH++GL GQ + W+G DG WY+L+KDD  DL INVR TAPLP +FPDRQ +T +A++S+G+S+V+EVK PYT DT GC  DVSPC A+GGL I VDG  VD L                S  +P      GG+++WARM +D+L GRRQL   ++ E+W+L +  NM A  +CA ++   DL+++Q++ A+ +I TPT  VRL+AG+N++  G+ +  GR LP+L+FWQ+ VG++GL +   +LSGL GETA  V D  G  VMEG +A  G ++DYRVS A G  FALL
Sbjct:   20 DPHMRGLLGQRVNWSGFDGGWYSLIKDDNADLHINVRVTAPLPDEFPDRQLMTSLAIMSEGYSVVIEVKNPYTTDTGGCPEDVSPCHANGGLRIIVDGHEVDELL-------------RFSRQMP------GGKRIWARMYQDILEGRRQLRGGESLEEWILRYDQNMPARTWCAKYIAENDLADLQANHAIFKIQTPTVTVRLNAGVNYQSNGELNWDGRVLPDLEFWQIDVGIDGLDVDKPALSGLFGETACPVYDENGKAVMEGYDAFRGAVEDYRVSSALGVHFALL 291
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5KYD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD0_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 1.170e-69
Identity = 134/302 (44.37%), Postives = 182/302 (60.26%), Query Frame = 1 
Query:  616 VCFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLS-QGHSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDGALVDFLNGPTNDVHLPGG-IEVSSSNLPQECREFGGRKVWARMQKDM--LRGRRQLSVADTFEDWMLSFTNMVAPEFCATFVTN---GDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAG-KTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALLH 1497
            V  D H+ GL GQ I+W G D  WY L+ + +   Q+N R TAP+P +FP RQ ++GV++ S +G SLVVEVK P T +T+GCS+  +PCLA+G L I VDG     L  P  ++ LPGG + VSS+NLP ECR FGG ++WA     M    GRR L     F DW+L    M AP +CA F        LS+VQS++A+LR+ T    VR+  G+N++ +   +D     +PELDFWQ  +  E L  + E L G+LG+TAR V+D +G  +  G EAL G ++  RVSG  G DF  +H
Sbjct:    7 VSGDSHMVGLLGQEIDWYGEDSGWYCLLVNSE--FQVNARVTAPMPDEFPTRQLVSGVSIRSAEGPSLVVEVKNPITTETEGCSSTSAPCLAEGALRILVDGDESHALQSPVENLVLPGGDLVVSSANLPAECRPFGGDRIWAAQFAAMNDASGRRSLRGHTPFADWVLEADTMAAPGWCALFAREQRLSGLSSVQSNRAILRVETGGVTVRVDVGVNYQDSVLSSDGNAVLVPELDFWQTDIAFEELRPSGE-LGGMLGDTARYVIDDDGKPITSGMEALRGPVETCRVSGPLGVDFEQMH 305
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: D7G544_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G544_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.590e-43
Identity = 109/290 (37.59%), Postives = 165/290 (56.90%), Query Frame = 1 
Query:  511 CLNAAG-ESEISSGSDMEDTVLIIDITPNVCPCGVSVCFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQG-HSLVVEVKEPY--------TVDTQGCSNDVSPCLADGGLSISVDGALVDFLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARM--QKDMLRGRRQLSVADTFEDWMLSFTNMVAPEFCATFVT--NGD---LSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVE 1329
            C NA+  +S++    D  D  +I     N   C   +  DPHL GLRGQH +W G DG WYA +    D LQ+N+R T+ LP  FP+RQ +TGVA++++G H++  ++ +P         TVD  G +    PCL +GGL I+VDG   + L G   +    G I +++ NLP EC+ FG   +W  +  ++ +  G R L  A+T  DW+++ + M+AP +C  ++   NGD   L++++S  A+LRI TP   +R++ GIN  R  +T + GR +P   FWQM V VE
Sbjct:  206 CENASDCDSDLDPADDGVDFGVIQQSMFNNGFCTPRIWDDPHLTGLRGQHFDWYGQDGGWYAFLST-PDQLQMNLRVTSHLPATFPERQLVTGVALVTEGGHTITADIVDPLDLAPTCHGTVDAVGSA----PCLVNGGLRITVDGR--EQLQG-AGEYDFDGDIHITAVNLPLECQRFGDYMMWGDLDVEQRLRGGSRSLRSAETVFDWLVADSVMIAPAWCVKYLKELNGDVTALASMKSSHAVLRIGTPNLSLRVNVGINTERE-QTLQDGRVVPTASFWQMDVRVE 486
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 3.860e-41
Identity = 110/302 (36.42%), Postives = 170/302 (56.29%), Query Frame = 1 
Query:  601 PCGVSVCFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQG-----HSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDGALVDFLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARMQKDMLR--GRRQLSVADTFEDWML---SFTNMV-APEFCATFVT---NGDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKDYRVS 1464
            P   + C DPH+ G  GQ  ++TG DG+WY L+ D    + +N+R TAP+P+  PD  +ITG+++++Q      HS+V+ VK+P+++++  C   V+PCLA+G LS+S+DG   + L+ P   V +   ++VS  NLP  CR FG  K W R + +  +  GRR  S      DW+L   + TNM    E+ A  V    +G L   +S+ A  +IV P A VRLS G  H+ A    ++G  LP+   WQM + ++  S+      G+LGET     DA+G  VM G E++ GT ++  ++
Sbjct:   49 PTDPTACGDPHMTGFHGQKFDFTGDDGEWYCLISD-LPSMNLNMRVTAPVPSR-PDITYITGISLITQDGNGLDHSVVITVKDPHSLESS-CPAGVTPCLANGALSVSLDGK--EALSAP-GVVEMAPNMKVSVVNLPGACRSFGFEKYWERKKLEYAQAGGRRLSSKDQDMGDWILGDPTATNMAECTEYVARHVVEGGDGGLFAHKSEHASFQIVMPIATVRLSHGRLHQIA----QYG--LPDHSTWQMNLAIDSDSVG-VGAQGVLGETLVPTRDADGEYVMHGMESIRGTQEECELA 337
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: D7G4E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E8_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 7.580e-35
Identity = 61/106 (57.55%), Postives = 82/106 (77.36%), Query Frame = 1 
Query:  607 GVSVCFDPHLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQGHSLVVEVKEPYTVDTQG-CSNDVS-PCLADGGLSISVDG 918
            G  +C DPH++GLRGQHI+W GVDG WYA +KDD  DL +NVR TAPLP +FP+RQ +TG++V++  HSL++EV  PY  D  G C + +S PCLA+GGLS++V+G
Sbjct:    4 GTDICDDPHMKGLRGQHIDWFGVDGGWYAFIKDDDIDLHVNVRLTAPLPEEFPERQLVTGLSVIAGEHSLILEVTNPYDTDINGGCLDGMSTPCLANGGLSVTVNG 109
[Close]
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Match: A0A6H5L2W0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W0_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 5.860e-24
Identity = 80/292 (27.40%), Postives = 141/292 (48.29%), Query Frame = 1 
Query:  634 LQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFITGVAVLSQG-----HSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDG--ALV---DFLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARMQKDMLRGRRQLSVADTFE---DWMLSFTNMVAPEFCATFVTN------GDLSNVQSDQALLRIVTPTAVVRLSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETARVVVDAEGNDVMEGAEALSGTIKD 1452
            + G RGQ  ++TG DG WY+ V  D   + +N+R  + +P+  P+  +ITG+ + +       H++V+ V +P+++D+  C   VSPCLADG L++ +DG  AL+   + L GP         + +S+ NLP  CR FG  + W R +++  RG R+L  +   +   DW+L          C  +V        G L     +    +I+TP   +R +                      F  M + ++ + ++  + +G+LGET +  +DA G+ +M+G  ++ G   D
Sbjct:    1 MTGFRGQKFDFTGQDGGWYS-VHSDMPRIHLNMRARSLVPS-VPEITYITGLGITTTDANGLDHTIVITVTDPHSLDS-ACPVGVSPCLADGALTVQLDGKHALLAPGEVLFGPQ--------VAISAVNLPGACRSFGFEEYWERKKQEYARGGRRLPSSTQMQAMSDWILGDPTATNMAECTEYVVEATRNGLGGLFEHDLEHTSFQILTPMGTIRRAMAAF----------------TSFPCMNLAIDRIDVSPNA-TGILGETQKPTLDANGSPIMQGMASIRGAQDD 264
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig664.17645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JS96_9PHAE8.890e-10855.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMW2_ECTSI1.020e-10053.08Imm upregulated 3 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JNZ2_9PHAE4.200e-9954.46VWFA domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP35_9PHAE6.290e-8951.17Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JP37_9PHAE4.760e-8849.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYD0_9PHAE1.170e-6944.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G544_ECTSI1.590e-4337.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRS2_9PHAE3.860e-4136.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4E8_ECTSI7.580e-3557.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W0_9PHAE5.860e-2427.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig664contigF-serratus_M_contig664:194330..200314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons4
Model size2192
Cds size1323
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig664.17645.1prot_F-serratus_M_contig664.17645.1Fucus serratus malepolypeptideF-serratus_M_contig664 195019..197239 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932041.8001382-UTR-F-serratus_M_contig664:194329..1950181622932041.8001382-UTR-F-serratus_M_contig664:194329..195018Fucus serratus maleUTRF-serratus_M_contig664 194330..195018 -
1690964116.7573838-UTR-F-serratus_M_contig664:194329..1950181690964116.7573838-UTR-F-serratus_M_contig664:194329..195018Fucus serratus maleUTRF-serratus_M_contig664 194330..195018 -
1622932041.8753386-UTR-F-serratus_M_contig664:197239..1972611622932041.8753386-UTR-F-serratus_M_contig664:197239..197261Fucus serratus maleUTRF-serratus_M_contig664 197240..197261 -
1690964116.799727-UTR-F-serratus_M_contig664:197239..1972611690964116.799727-UTR-F-serratus_M_contig664:197239..197261Fucus serratus maleUTRF-serratus_M_contig664 197240..197261 -
1622932041.8890147-UTR-F-serratus_M_contig664:200156..2003141622932041.8890147-UTR-F-serratus_M_contig664:200156..200314Fucus serratus maleUTRF-serratus_M_contig664 200157..200314 -
1690964116.8098664-UTR-F-serratus_M_contig664:200156..2003141690964116.8098664-UTR-F-serratus_M_contig664:200156..200314Fucus serratus maleUTRF-serratus_M_contig664 200157..200314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932041.8155475-CDS-F-serratus_M_contig664:195018..1959421622932041.8155475-CDS-F-serratus_M_contig664:195018..195942Fucus serratus maleCDSF-serratus_M_contig664 195019..195942 -
1690964116.7668009-CDS-F-serratus_M_contig664:195018..1959421690964116.7668009-CDS-F-serratus_M_contig664:195018..195942Fucus serratus maleCDSF-serratus_M_contig664 195019..195942 -
1622932041.8340359-CDS-F-serratus_M_contig664:196262..1966041622932041.8340359-CDS-F-serratus_M_contig664:196262..196604Fucus serratus maleCDSF-serratus_M_contig664 196263..196604 -
1690964116.7754452-CDS-F-serratus_M_contig664:196262..1966041690964116.7754452-CDS-F-serratus_M_contig664:196262..196604Fucus serratus maleCDSF-serratus_M_contig664 196263..196604 -
1622932041.8577218-CDS-F-serratus_M_contig664:197182..1972391622932041.8577218-CDS-F-serratus_M_contig664:197182..197239Fucus serratus maleCDSF-serratus_M_contig664 197183..197239 -
1690964116.7880878-CDS-F-serratus_M_contig664:197182..1972391690964116.7880878-CDS-F-serratus_M_contig664:197182..197239Fucus serratus maleCDSF-serratus_M_contig664 197183..197239 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig664.17645.1

>prot_F-serratus_M_contig664.17645.1 ID=prot_F-serratus_M_contig664.17645.1|Name=mRNA_F-serratus_M_contig664.17645.1|organism=Fucus serratus male|type=polypeptide|length=441bp
MHGANYLLLFLGAITGFGQAYVTTGNEVMDAQLGMLGAGSDGMIEAEGRS
NQRELQSSTVRSFDIVVTFINSINLAEDTAIDITFDGSSGPVGTFTVTAP
APGGTEFFEFCLNAAGESEISSGSDMEDTVLIIDITPNVCPCGVSVCFDP
HLQGLRGQHIEWTGVDGDWYALVKDDKDDLQINVRTTAPLPTDFPDRQFI
TGVAVLSQGHSLVVEVKEPYTVDTQGCSNDVSPCLADGGLSISVDGALVD
FLNGPTNDVHLPGGIEVSSSNLPQECREFGGRKVWARMQKDMLRGRRQLS
VADTFEDWMLSFTNMVAPEFCATFVTNGDLSNVQSDQALLRIVTPTAVVR
LSAGINHRRAGKTDRFGRDLPELDFWQMGVGVEGLSLAHESLSGLLGETA
RVVVDAEGNDVMEGAEALSGTIKDYRVSGAEGTDFALLHN*
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mRNA from alignment at F-serratus_M_contig664:194330..200314-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig664.17645.1 ID=mRNA_F-serratus_M_contig664.17645.1|Name=mRNA_F-serratus_M_contig664.17645.1|organism=Fucus serratus male|type=mRNA|length=5985bp|location=Sequence derived from alignment at F-serratus_M_contig664:194330..200314- (Fucus serratus male)
GTTGAAAACCAGTATAATATATTATTACTTGCTAAAAAACACACCGATCA
CCGCCAGCGAGCAAGCACATGCCCACTCATTCACTTCCACTCTTCCCCCT
CTTCCTTCTCCATTCGAGTCTTCGAGTCTCTCCAGAGAAAAGAAGCTCAA
CAATACAGGTGAGAAGGGCAACCGATATCATCTTGGGTGCACTTACTACT
TGTCAGTTGCAGCAGTCAGTCGTGTTGTGGGTCGAAAGAACGTCTCGCTT
GGGATCGCATTCCCTACCGTGCGGCCGATAGCCGTCCCAAAGCAAGACCT
GTCATAATGTTGCCAAGGCGGTACTACTCTGAAATTTGCTTGCCTTCCAA
CGAATATATTATCTTCTCTTTTCTCTTTTCTTGTGCTGGTGTCGTTTTGG
CGTTTTGTCTGGTGTCTGGTGTTTTATGCACGACGAGTACGCGCCGAAAA
ACAAGCACGACAATCCACAATCTAGACTATTATAGAGTGTAAAGCATAAT
ACCAGTATATGGCTGGCTGTTGTCGCATCGATGCACTACGACAACACAAA
GCACAGGAAGGAGTAGTTACAAACACACGCACCCAGTCCACTATCGGGCG
TCTTTCACGTTCACCATCGTCAGCTGATATGATAGTAAGCGCACGCATGC
ATGCATGCATATGCATTCGACCGGCGCTGACGATCCGCGCCCATTATATA
CACTACTCGGTGCTTTGTGAATGATGATAATTCCAGCAATGATATTCGTA
CTGGTACAAAATGATCTCGCTTCAGTTCCACGATCATCATATATATAGGC
TCTATCATCGCCGAAGACTTTACAATGTCAAGAAATAGCATTATTCCTAG
AACATATGTATTCCTACTCGATTTTTCTTTCTTCGCCGAGAAGTAAGGGC
CTACCTTCTACCTTCTTCGCGGCGTTTGGTGTTTACAGAGTTCCATCGAA
CAAGAAGTCTTAAGAGCGGGAAACCCACGAGCTCGTTCCGTCTCATCGAA
TGAGAGAAGGGCGGGTGGTCCGTTTTTCGATGCCGACCTCTCTTGTTTGC
CAGGAGAACAAAGGCTCAAGAGTTACATATTATTTGTAGATAACTCGAAG
TTTTAGCTGTTTTGTCCCATTACATTCTTCATAGCGAATCGGTCGGCAAG
CCAATTAGATACGAGTAAAAACGAATACCCGCACTACAATATTTATTTCA
GAAGTTAGAAAATCAAGTGTATCATTTCCGCAGCAAGCACTCTCTCGTTC
TCGCTCCTGCATTAGTTGGAAAGTGTCTCCATGTTTTATCATATAATAGC
TCTAATTAAAACCATTTACAGCCCGACATGCCTTTAACGAAAATATAGAA
CGTACCTATTAGACCTTCTGAGCACCCCCCAATCAGGGGGGAAAAATCTC
TTTCCCCACCTTTTTTCGCCGACCCTTTCGTTGTTTAAAGAAAAATCAGA
ACGCGCCTATACCTTCTGTTAATAGTTAATAGTTAATAGCATACTGTACC
CCAGTCAGGAGGGGGAAAAAGGTCACAACGTTTAGGTGGGAACATAGGCT
GCAAATACAAAACCTCTCCATGGCATTCAAACGTTGTTTAAAAAAAATCA
GAACGCGCCTGGACCTTGATTCACATACACATTCAGCGTATGTATCATCC
TTAGCCTTGCAACTGAAAAAGCTACGGTGACACAACAAGTCAGCCATAGA
CCCATCAAATGCCAATCCCGCTTGCTTGTGGCCACAACGAGGTACGAAGG
TCAACGGGTCACATCATGCTGGTGCCAACCCACTATACTCACAGACCAAC
AGGGATCCAAAACGCGACAAAAAGTCATGCGACTCTACAACCAATGGCAC
CGGCAAAAATTATTGTCAAAACGATTCAAGAGCTTTTCGATATTTCATAT
CGAGAGCAGCAGCCTCGATCGACTCGAGCGGTTTGTTTGAAAAAGTCCCA
TGAAGCTTGCCCGCTCGCCGCTCCTTGTGGCCTCGTAGGAAGAAAAAAGA
CCGTGCGTGGTCAGACATAATTTTTCCCTCAGAAACCTCCCGGTTCGTTC
GCGCCTTTGATTCTCGCGCACAGGGGTATTTGCAAAATGGAATTCCGTGA
CGGAGTTCCTTCGTTACACTCTTACTTCCACAAAAAGAAGACCACGGAAT
TCCTTCAAAATTGATGTTTGCTAAAATGGCGGAAGAACTTGCCGGCCCAC
CCTTGAAACCCTCTACTGGTATATTTAGTATAATGCTTACAAAATACTCT
ACAGTTAGTAGTAGAACGCCTGGGGTTGTGTTGCCCCGGGCACGGCCCTC
GTTGGACATCATCAGGCACATTTTCCCCGAAATTTCCTGATCCCCACGAA
GTTCCCATTTTTATGGGGAGGCTATTTTAAGTGAAAAAAGGATTTTCTTT
CCTTCCCACTGGAATCGTCCAAGGGATTCCTCGTTTACAAACACCTTACT
TACTAATTAATCCAAAACACAACTATAATACAGTACAGTACAGAGTGCAC
GGTATCATCGACAGATACAAGGCATCAGTGCCGTTGTGGAAAAACTGTCT
GGTACGTATGAAAGTAGCATTTGGTACGAAGTACCACTGTCATGAGGTAA
CGTGTAGTACCAGAAAAAAATGGAAAAGAGCTGCTGCTGTTGGTGGTTTT
TACTGAACAGTCTTTCTTTGTCTTCAGCGTGTTTCCTTTCCTTGGTCCCT
TTCTTCATAGTAGTAGTAGTAGCATTACCAGGGTACCATGTAAATAGTAG
TGTGGTACTAGAGTCGACATTTGCTCCAAACATGGACTTCCCTCTATCCG
TTTCTCTGCCACCGACCGCTAAAGGTACTCGGGTTTGACTGTTGACAGAA
CCAGTGGCACGTACCCACATCGTTTGTGTACAGTGTAGTACTTTACTGAT
ATGCACTATATTATTAATATTAATATGAGGACTGCGTAGTACGTAGCTTC
TGTCAGGTGATAACACTATGCCATTTTTCCCTCCGCCAATAAATTTGGAA
TTTTGCCGTCCTCGCTCAAAATGGGGTGGACCAACTCCTCGTCCAACGTC
CAGTACACTTTTTAACACCGGCAATATGCACGGAGCCAATTATCTTCTTC
TCTTCCTGGGCGCCATCACTGGCTTCGGACAGGTCAGATCAGATCAGCCA
GATCAGCCAAATAGCACCAAGCAACGTACTACAGTAACTTTTTCTCTCCA
GCTCGCGTGTGCCGCTTTACTTCGGTACTGAATGTATGGTCATCACTACT
TACGACAGAGTATGTCATCCGCTACGAGTACGTAGATAATGATGAATTGC
CGCAAACGGTTTCCAAACAGTAGAATCCAAGAGTCTTCTTATTGGATGAT
TAAAGTAGGAGAGAGACTCTTACGATGCCCAACTTCACCCGACATGTTGT
ATACGGAGTATTAATCACGACCACATGTATATCCGTCCGATGTGTCGTTT
CACCAGATTATCATCTTAAACCCCAGTTTGGGAGCAATAGTGATAAACTG
AGTCTATTTTATTCTATAGGGGACGTGCGCGTCGTCGACTCCCCCCCCCC
CCCTCTTGCCATACGTTAGTTTGTACCTTACCTTAACTTATCTTACCTTA
GTGCGTACTGGTGCTTTTTTTTCTCTTCTGAAGCCCCGTTTCGCGGACCG
TTGGTAAGCCTACGACGGAATATTTTACCGTTCTCCCGACTGCTCGCCAT
GTCCACGTAGGCCTATGTCACAACTGGCAATGAAGTTATGGATGCTCAGC
TCGGGATGCTTGGCGCAGGATCGGATGGCATGATCGAGGCAGAAGGCCGT
TCCAACCAGCGCGAACTCCAGAGCAGCACCGTCCGGTCCTTCGATATCGT
TGTCACGTTCATTAATTCCATCAATTTGGCAGAGGACACTGCCATCGATA
TCACGTTCGACGGATCGTCGGGACCAGTCGGCACCTTCACCGTGACTGCC
CCGGCACCCGGTGGAACGGAGTTTTTCGAGTTCTGCTTGAACGCCGCAGG
CGAATCGGAAATCAGCTCTGGAAGTGACATGGAAGACACAGTTCTGATCA
TTGTGAGCACAGCAAATTGCCAGTTTCAAATCTAAAAACTAGAGAAAATA
TAAAGAGCTCGTTTACATGCGTTCTATCTCATGAGTAAAGCCGGCGCCAG
AAATGAAGCACCCGCGATGCAGCCGCAAATAGAACTCATTGCCTCCTACG
AATCGCGCGGTTGAGGGGGGTGTGAAGGAAATCTTGCAGCCGGAGGGAAG
TGCTATTCCGGGAAGTCGCAACGTCGCGAAAGCACTATAACTTGATAGCG
GTTTGTTACATCGATGGGCGAGCAAACCCTTTCTTTTCGCTGTACTGATT
CCTTGCCTCTGCCATTCGCCAGGACATCACTCCGAACGTGTGCCCCTGTG
GAGTCTCCGTGTGCTTCGACCCGCACCTGCAAGGCCTTCGTGGACAGCAT
ATCGAGTGGACTGGGGTCGACGGCGACTGGTACGCCCTCGTCAAGGATGA
CAAAGATGACCTCCAGATCAACGTGCGCACCACCGCGCCTCTGCCTACCG
ACTTCCCCGACCGTCAGTTCATCACGGGTGTGGCCGTTCTTTCGCAGGGA
CACTCTCTCGTCGTCGAGGTGAAGGAACCCTACACCGTCGACACTCAGGG
CTGCTCCAACGACGTCTCACCCTGCCTGGCTGACGGTGGCCTGAGTATCT
CTGTAGACGGAGCGCTGGTTGACTTCCTCAACGGCCCTACCAACGACGTA
CACCTTCCGGGTGGTATTGAGGTGTCCTCGTCCAACCTGCCTCAAGAGTG
CCGCGAGTTCGGCGGCAGGAAGGTATGGGCACGTATGCAGAAGGACATGC
TGCGAGGCCGCCGCCAGCTCTCTGTTGCCGATACATTCGAGGACTGGATG
TTGAGCTTCACCAACATGGTGGCGCCGGAGTTCTGCGCCACGTTCGTTAC
CAACGGTGACCTTTCCAACGTGCAATCCGACCAGGCCCTTCTCAGGATCG
TGACCCCCACGGCCGTTGTGCGGCTCTCCGCCGGCATCAACCACCGCCGT
GCCGGCAAGACGGACCGGTTCGGTCGCGACCTCCCGGAGCTTGACTTCTG
GCAGATGGGTGTTGGTGTAGAGGGCTTGTCTCTTGCACACGAGTCTCTTT
CTGGCCTCCTGGGCGAGACTGCGCGCGTGGTTGTGGACGCCGAGGGTAAT
GATGTGATGGAAGGAGCTGAGGCACTCTCCGGCACCATTAAAGACTACCG
CGTGTCCGGCGCCGAGGGCACTGACTTTGCTCTTCTCCACAACTAAGGAA
AATAGTGAGGTACTATAAAATTGAGTATAAGGTGGAAGATTGTCATGGCG
AGTAATCTCTAGCTCGTTTCAAGGCAACTAATGCAAGAGTTGCTTTGGTC
ATATTGACTCCGGCCGTCTTGCCGTGTGGTTGGTGTGTGCGCGTGTTGAT
AGGCCGTGGTAATACGCGATTATTTAACAAGATCAATGGTACACCAAATT
ACTCCACTCGATGAACCACAATGAAAGGCGAGATTGTGATATATCGAGAT
TTCGAGCTGCAGAGGCGCGGCACTGCCTCGCTCCTATTAGCCATTAGTAG
TTGTGGAGATTATGTATGTCTTCGGGAGTATGTGGCTCCTTCGTAGCGCA
TTTTTTGGCCTCCCTATTTCAAGCTGTTTTGGCCTGTTAACTTTTGTCTC
TAAATAATGTAGCCTGATTGAAATCAACTTCCTGCTTCTAAAATAAACTT
TCGAAGTAAATAAACAAATGTCATATCGACAAGGGTCTGAATGCGGTCGA
AATTGAAATGTTCGAATAAACTCGGACATTGCCGCTGCTGCCTCAGCAGC
GACTGGCGGCGATTGGCGAAACGTGTACAAGCCTTACTGGCCACTTCCCT
CCCCGCGATGCGCTTGGTCGGAACTCTGCACAGATATGCCATTAGGATTG
AATTGCTAAATGTCGTGGGATGAACAAAATCCTCA
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Coding sequence (CDS) from alignment at F-serratus_M_contig664:194330..200314-

>mRNA_F-serratus_M_contig664.17645.1 ID=mRNA_F-serratus_M_contig664.17645.1|Name=mRNA_F-serratus_M_contig664.17645.1|organism=Fucus serratus male|type=CDS|length=2646bp|location=Sequence derived from alignment at F-serratus_M_contig664:194330..200314- (Fucus serratus male)
ATGCACGGAGCCAATTATCTTCTTCTCTTCCTGGGCGCCATCACTGGCTT
CGGACAGATGCACGGAGCCAATTATCTTCTTCTCTTCCTGGGCGCCATCA
CTGGCTTCGGACAGGCCTATGTCACAACTGGCAATGAAGTTATGGATGCT
CAGCTCGGGATGCTTGGCGCAGGATCGGATGGCATGATCGAGGCAGAAGG
CCGTTCCAACCAGCGCGAACTCCAGAGCAGCACCGTCCGGTCCTTCGATA
TCGTTGTCACGTTCATTAATTCCATCAATTTGGCAGAGGACACTGCCATC
GATATCACGTTCGACGGATCGTCGGGACCAGTCGGCACCTTCACCGTGAC
TGCCCCGGCACCCGGTGGAACGGAGTTTTTCGAGTTCTGCTTGAACGCCG
CAGGCGAATCGGAAATCAGCTCTGGAAGTGACATGGAAGACACAGTTCTG
ATCATTGCCTATGTCACAACTGGCAATGAAGTTATGGATGCTCAGCTCGG
GATGCTTGGCGCAGGATCGGATGGCATGATCGAGGCAGAAGGCCGTTCCA
ACCAGCGCGAACTCCAGAGCAGCACCGTCCGGTCCTTCGATATCGTTGTC
ACGTTCATTAATTCCATCAATTTGGCAGAGGACACTGCCATCGATATCAC
GTTCGACGGATCGTCGGGACCAGTCGGCACCTTCACCGTGACTGCCCCGG
CACCCGGTGGAACGGAGTTTTTCGAGTTCTGCTTGAACGCCGCAGGCGAA
TCGGAAATCAGCTCTGGAAGTGACATGGAAGACACAGTTCTGATCATTGA
CATCACTCCGAACGTGTGCCCCTGTGGAGTCTCCGTGTGCTTCGACCCGC
ACCTGCAAGGCCTTCGTGGACAGCATATCGAGTGGACTGGGGTCGACGGC
GACTGGTACGCCCTCGTCAAGGATGACAAAGATGACCTCCAGATCAACGT
GCGCACCACCGCGCCTCTGCCTACCGACTTCCCCGACCGTCAGTTCATCA
CGGGTGTGGCCGTTCTTTCGCAGGGACACTCTCTCGTCGTCGAGGTGAAG
GAACCCTACACCGTCGACACTCAGGGCTGCTCCAACGACGTCTCACCCTG
CCTGGCTGACGGTGGCCTGAGTATCTCTGTAGACGGAGCGCTGGTTGACT
TCCTCAACGGCCCTACCAACGACGTACACCTTCCGGGTGGTATTGAGGTG
TCCTCGTCCAACCTGCCTCAAGAGTGCCGCGAGTTCGGCGGCAGGAAGGT
ATGGGCACGTATGCAGAAGGACATGCTGCGAGGCCGCCGCCAGCTCTCTG
TTGCCGATACATTCGAGGACTGGATGTTGAGCTTCACCAACATGGTGGCG
CCGGAGTTCTGCGCCACGTTCGTTACCAACGGTGACCTTTCCAACGTGCA
ATCCGACCAGGCCCTTCTCAGGATCGTGACCCCCACGGCCGTTGTGCGGC
TCTCCGCCGGCATCAACCACCGCCGTGCCGGCAAGACGGACCGGTTCGGT
CGCGACCTCCCGGAGCTTGACTTCTGGCAGATGGGTGTTGGTGTAGAGGG
CTTGTCTCTTGCACACGAGTCTCTTTCTGGCCTCCTGGGCGAGACTGCGC
GCGTGGTTGTGGACGCCGAGGGTAATGATGTGATGGAAGGAGCTGAGGCA
CTCTCCGGCACCATTAAAGACTACCGCGTGTCCGGCGCCGAGGGCACTGA
CTTTGCTCTTCTCCACAACTAAGACATCACTCCGAACGTGTGCCCCTGTG
GAGTCTCCGTGTGCTTCGACCCGCACCTGCAAGGCCTTCGTGGACAGCAT
ATCGAGTGGACTGGGGTCGACGGCGACTGGTACGCCCTCGTCAAGGATGA
CAAAGATGACCTCCAGATCAACGTGCGCACCACCGCGCCTCTGCCTACCG
ACTTCCCCGACCGTCAGTTCATCACGGGTGTGGCCGTTCTTTCGCAGGGA
CACTCTCTCGTCGTCGAGGTGAAGGAACCCTACACCGTCGACACTCAGGG
CTGCTCCAACGACGTCTCACCCTGCCTGGCTGACGGTGGCCTGAGTATCT
CTGTAGACGGAGCGCTGGTTGACTTCCTCAACGGCCCTACCAACGACGTA
CACCTTCCGGGTGGTATTGAGGTGTCCTCGTCCAACCTGCCTCAAGAGTG
CCGCGAGTTCGGCGGCAGGAAGGTATGGGCACGTATGCAGAAGGACATGC
TGCGAGGCCGCCGCCAGCTCTCTGTTGCCGATACATTCGAGGACTGGATG
TTGAGCTTCACCAACATGGTGGCGCCGGAGTTCTGCGCCACGTTCGTTAC
CAACGGTGACCTTTCCAACGTGCAATCCGACCAGGCCCTTCTCAGGATCG
TGACCCCCACGGCCGTTGTGCGGCTCTCCGCCGGCATCAACCACCGCCGT
GCCGGCAAGACGGACCGGTTCGGTCGCGACCTCCCGGAGCTTGACTTCTG
GCAGATGGGTGTTGGTGTAGAGGGCTTGTCTCTTGCACACGAGTCTCTTT
CTGGCCTCCTGGGCGAGACTGCGCGCGTGGTTGTGGACGCCGAGGGTAAT
GATGTGATGGAAGGAGCTGAGGCACTCTCCGGCACCATTAAAGACTACCG
CGTGTCCGGCGCCGAGGGCACTGACTTTGCTCTTCTCCACAACTAA
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