prot_F-serratus_M_contig1233.1764.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1233.1764.1
Unique Nameprot_F-serratus_M_contig1233.1764.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length291
Homology
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 7.150e-78
Identity = 142/307 (46.25%), Postives = 192/307 (62.54%), Query Frame = 0
Query:    1 AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            A+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG++ + ++DD+ V LPP ++ +I AI  VT W+Q+ L  +GI L+  KS+ L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+ G  A   G+PT  E                +  Q HLPIREGGLG+TSS  I+ +A+
Sbjct:  263 AYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 569          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 250 bits (639), Expect = 1.830e-76
Identity = 138/307 (44.95%), Postives = 189/307 (61.56%), Query Frame = 0
Query:    1 AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            A+NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG++ + ++DD+ V LPP ++ +I AI  VT W+Q+ L  +GI L+  KS  L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+  L+ ++D Q S+Q+LR+S   RL HLLRT+ PSIT  AA  +D+L+ WA++ I+ G  A   G+PT  E                +  Q HLPIREGGLG+TSS  I+ +A+
Sbjct:  111 AYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSNVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGIPAELIPRLSTLDDPQTSYQLLRMSGVPRLFHLLRTIAPSITNTAAREHDSLMIWAVSKIVLGKMANTVGIPTVEEVPANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 417          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 259 bits (663), Expect = 4.160e-75
Identity = 143/306 (46.73%), Postives = 198/306 (64.71%), Query Frame = 0
Query:    1 AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGD---GAAAAGLPTPAES------------LRQAHLPIREGGLGLTSSSSIKGAAY 291
            AFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL+  D G   V+ SA GVQQGCNLGPLCYSAG LK+L++FRANPPV G++ ++FIDD+ V+LP   + + AA   VT W+Q  +   G++LNR KS+ L   G   +   E+ R  ++ T L V   GMR+VGVPVG   + +    +   GEP +L++ +A ++DAQAS QILR SA +RL+ LLR++PP +T +AA+ +D  VE  L +I+ G    G  A   PT   S            +RQA LP+REGGLG+ S+  I G A+
Sbjct: 1299 AFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLRDFRANPPVVGAQLMAFIDDLVVLLPKNHACNPAAAEAVTTWIQANMQPLGVALNRSKSKILFPPGTDVKSWPEKDRETLERTQLAVAEGGMRIVGVPVGEPDYIKRSALDIARGEPTDLLKEIASLDDAQASLQILRFSAATRLNFLLRSLPPDLTKEAASEFDKSVEQTLETILNGPSQPGEHAPHEPTEENSPSLPRLNLSPVGIRQARLPVREGGLGIPSTVDISGPAF 1603          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.340e-74
Identity = 137/308 (44.48%), Postives = 193/308 (62.66%), Query Frame = 0
Query:    1 AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            A+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP ++ ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G  A +  +PT  E                 +  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:  263 AYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVTEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 6.270e-74
Identity = 137/308 (44.48%), Postives = 194/308 (62.99%), Query Frame = 0
Query:    1 AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            A+NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP ++ ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G  A +  +PT  E                 +  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:  111 AYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 418          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 1.650e-73
Identity = 137/308 (44.48%), Postives = 193/308 (62.66%), Query Frame = 0
Query:    1 AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            A+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G  EVV S RGVQQGCNLG   +  G L I+KEF   PPVPG + + ++DD+   LPP ++ ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G  A +  +PT  E                 +  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:  263 AYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 570          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5K541_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K541_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 6.780e-68
Identity = 122/268 (45.52%), Postives = 167/268 (62.31%), Query Frame = 0
Query:   40 LDGGGSEVVESARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            ++ G  E+V S RGVQQGCNLG   +S G L  +KEF   PPVPG++ + ++DD+ V LPP ++ +I AI  VT W+Q+ L  +GI L+  KS+ L  +G     LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D L+ WA++ I+ G  A   G+PT  E                +  Q HLPIREGGLG+TSS  I+ +A+
Sbjct:    1 MEDGSIEIVRSQRGVQQGCNLGGFGFSVGLLDTMKEFNDKPPVPGAKLIGYVDDLQVHLPPGLARNIQAIATVTNWIQDHLLQKGIELSLPKSKVLFPEGFFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLGITSSVLIRESAF 268          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5JLD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD7_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.690e-53
Identity = 99/236 (41.95%), Postives = 147/236 (62.29%), Query Frame = 0
Query:   73 LKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            +KEF   PPVPG + + ++DD+   LPP ++ ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+P GTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL HLLRT+ PSIT  AA  +D ++ WA++ I+ G  A +  +PT  E                 +  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPAGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFHLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5JL76_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL76_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 1.950e-51
Identity = 102/235 (43.40%), Postives = 143/235 (60.85%), Query Frame = 0
Query:   73 LKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            +KEF   PPVPG++ + ++DD+ V LPP ++ +I AI  VT W+Q+ L  + I L+  KS+ L  +G+    LT +++  +  TGL+V   GM +VGVPVGTE FQR F+     G PAEL+R L+ ++D QAS+Q+LRLS   RL HLLRT  PSIT  AA  +D L+ WA++ I+ G  A   G+PT  E                +  Q HLPIREGGL +T S  I+ +A+
Sbjct:    1 MKEFNDKPPVPGAKLIRYVDDLHVHLPPGLARNIQAIATVTNWIQDHLLRKVIELSLPKSKVLFPEGLFFSSLTNDEQRDLTKTGLSVAEGGMAIVGVPVGTECFQRSFVTNFARGNPAELIRRLSTLDDPQASYQLLRLSGVPRLFHLLRTTAPSITSTAAREHDNLMIWAVSKIVLGKMANTVGIPTVEEVRANPEKSEVDFFKDSARAQVHLPIREGGLRITCSVLIRESAF 235          
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Match: A0A6H5KKJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 4.810e-49
Identity = 99/236 (41.95%), Postives = 147/236 (62.29%), Query Frame = 0
Query:   73 LKEFRANPPVPGSRAVSFIDDITVILPPEISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQRVAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPMEDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIAGDGAAAAGLPTPAE-----------------SLRQAHLPIREGGLGLTSSSSIKGAAY 291
            +KEF   PPVPG + + ++DD+   LPP ++ ++ AI  VT W+QERL  +GI L+  KS+ L  +G+    LT +++  +   GL+V   GM VVG+PVGTE+FQR+F+ +   G+PAEL+  LA ++D QAS+Q+LRLS   RL  LLRT+ PSIT  AA  +D ++ WA++ I+ G  A +  +PT  E                 +  Q HLP+REGGLG+TS+  I+ +A+
Sbjct:    1 MKEFNNKPPVPGVKLIGYVDDLQAHLPPGLARNMQAISTVTNWIQERLSQKGIELSLPKSKVLFPEGLCMSSLTNDEQQQLTKIGLSVAEGGMPVVGIPVGTEEFQRNFVSKIARGDPAELILRLATLDDPQASYQLLRLSGVPRLFQLLRTIAPSITNSAAKIHDNMMMWAMSKIVLGKMADSMRIPTVKEVRADPTKSEEVDFFKGTARAQVHLPMREGGLGITSNVLIRESAF 236          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1233.1764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGJ4_9PHAE7.150e-7846.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE1.830e-7644.95Reverse transcriptase domain-containing protein (F... [more]
A0A6P0N5L4_9CYAN4.160e-7546.73Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5JCM0_9PHAE1.340e-7444.48Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE6.270e-7444.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LN63_9PHAE1.650e-7344.48Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K541_9PHAE6.780e-6845.52Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLD7_9PHAE1.690e-5341.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL76_9PHAE1.950e-5143.40Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKJ7_9PHAE4.810e-4941.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..151
e-value: 1.5E-8
score: 34.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..160
score: 13.795

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1233contigF-serratus_M_contig1233:184845..185768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1233.1764.1mRNA_F-serratus_M_contig1233.1764.1Fucus serratus malemRNAF-serratus_M_contig1233 184845..185768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1233.1764.1 ID=prot_F-serratus_M_contig1233.1764.1|Name=mRNA_F-serratus_M_contig1233.1764.1|organism=Fucus serratus male|type=polypeptide|length=291bp
AFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGSEVVES
ARGVQQGCNLGPLCYSAGSLKILKEFRANPPVPGSRAVSFIDDITVILPP
EISLDIAAIGKVTEWLQERLGIEGISLNRRKSQALLADGVGPEQLTEEQR
VAMDTTGLTVVRQGMRVVGVPVGTEQFQRDFLQEAVNGEPAELVRALAPM
EDAQASFQILRLSATSRLSHLLRTVPPSITGQAAASYDALVEWALASIIA
GDGAAAAGLPTPAESLRQAHLPIREGGLGLTSSSSIKGAAY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom