prot_F-serratus_M_contig6635.17641.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6635.17641.1
Unique Name	prot_F-serratus_M_contig6635.17641.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	267

Homology

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BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.390e-33
Identity = 94/221 (42.53%), Postives = 123/221 (55.66%), Query Frame = 0

Query:   26 LFLGNFQSTVVLDMGVMKMGEAREATLRIVAPEGGRRTATTFTVDPKHPSPPGLEIG-IDGGVSLAPGQCHEARVTWRPNRPGKFRGTLALRVNGRFPARASVVGEAFPLGGGGEKANRDDGRAFGNLAKKRPGGSSSSRSGGGIVPGRRVSLGGKGPRGLAHSTPASDKENCPSFSSAPKPSQPPKIPQPPSASSSAL------NRRRKMLEYAASRRLS 239
            L LGNFQ  VVLDMG++ +GE + ATLRI  PEG R+  TT   DP+HP   GLE+   DG +SL  G+  E  V WRP R GKFRG LA +V+GRFPA+ SVVGE   +GGGG++   D       +    P G+ + RS       +  +  G GP      T    KEN  S SS   P     +   P + ++AL      N+R++ML+Y+ SRRLS
Sbjct:   26 LVLGNFQGAVVLDMGLVTVGEGKGATLRIEVPEGARKAVTTIGFDPRHPLSGGLEVADFDGELSLGRGEYREVHVAWRPERVGKFRGNLAFKVDGRFPAQVSVVGETVDVGGGGKRRKGDAREGRKRVRGGLPVGARAGRS-----LSQEAASRGAGPH-----TSMYGKENRLSLSSTALPPAASVLGPSPDSFAAALCPRTANNKRQQMLKYSKSRRLS 236

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6635.17641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LLN9_ECTSI	1.390e-33	42.53	Similar to asp (Abnormal spindle)-like, microcepha...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR031549	Abnormal spindle-like microcephaly-associated protein, ASH domain	PFAM	PF15780	ASH	coord: 25..121 e-value: 3.4E-6 score: 27.2

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6635	contig	F-serratus_M_contig6635:21197..26545 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6635.17641.1	mRNA_F-serratus_M_contig6635.17641.1	Fucus serratus male	mRNA	F-serratus_M_contig6635 21197..27253 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6635.17641.1 ID=prot_F-serratus_M_contig6635.17641.1|Name=mRNA_F-serratus_M_contig6635.17641.1|organism=Fucus serratus male|type=polypeptide|length=267bp
MQSIIIPVPDMNPVSCPTDAESATTLFLGNFQSTVVLDMGVMKMGEAREA
TLRIVAPEGGRRTATTFTVDPKHPSPPGLEIGIDGGVSLAPGQCHEARVT
WRPNRPGKFRGTLALRVNGRFPARASVVGEAFPLGGGGEKANRDDGRAFG
NLAKKRPGGSSSSRSGGGIVPGRRVSLGGKGPRGLAHSTPASDKENCPSF
SSAPKPSQPPKIPQPPSASSSALNRRRKMLEYAASRRLSSVKHPPKDEEK
VKAPHDNVKSWAEKQAA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031549	ASH