|
|
Homology
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: D7G8Y9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Y9_ECTSI) HSP 1 Score: 338 bits (868), Expect = 2.680e-101 Identity = 200/397 (50.38%), Postives = 248/397 (62.47%), Query Frame = 1
Query: 121 QTDSHMVEYLHELEKAANQ---KGTEFSDAQQALATEMEVGITAANQVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSP--DINAGGNIRRQRGVTYFVEQTLHPKWSGQRFVFKVPPEAALRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVGWFPLNRRSSRLMHMAAGDKITGSVQLRVRWVHSAKAFLYARVQALESFLETVEARLERSRLLLERLRKEESKDRKTQLSTNLSGRKEPTRIARIKRTLDKVGLRVIGENKVVNNARR-----------------------------RAGLFTLSDHRE-------------------------NARGVIASGGDV--------SVVAPNNPSPKRTRSAL--GGRRLTAWTF 1104
+T+ ++ L ELE++ K + DA++ LA EM VGIT +QV VEVLAAT +R T L G+SDPYCVCYLK+PDS +A R QRG TYF E+TL+P WSGQRF+FKVPP A RKRGHGVRVLVLSRNL+RPNDF+GQADVPLSLLQDERE VGWFPLNRRSSRLMH+AAGDKI GSV+LRV+WV S A L+ +++ LE FL TVEARL+R RLL+ERL+KEE+KDRKTQL + GRKE ++IAR+KR L+K+G + IG + RA TL+ NA G+ A GGD S+++ + SP+R RS++ GGRRL+AWT
Sbjct: 5999 ETEPMSMKQLRELERSLGMDEPKVLQVLDAERVLANEMRVGITETHQVFVEVLAATSLRPTGLQGYSDPYCVCYLKIPDSTGGSKSADDRFRGQRGETYFCEKTLNPTWSGQRFIFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKIAGSVKLRVQWVFSLDALLHTQIRGLELFLGTVEARLQRIRLLIERLKKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEKMGFKGIGSDSKDGTGSAHGDHRKTPPFKSPLRGGGATITTPGGQLVRANSLTLASPSAHGYGSRIVARLSSPSSGGGGPGFSINAEGLRAGGGDTNGGGQAESSLLSLASLSPRRMRSSISMGGRRLSAWTL 6395
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: A0A6H5KMI8_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMI8_9PHAE) HSP 1 Score: 331 bits (849), Expect = 1.170e-100 Identity = 176/265 (66.42%), Postives = 208/265 (78.49%), Query Frame = 1
Query: 148 LHELEKAANQ---KGTEFSDAQQALATEMEVGITAANQVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSP--DINAGGNIRRQRGVTYFVEQTLHPKWSGQRFVFKVPPEAALRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVGWFPLNRRSSRLMHMAAGDKITGSVQLRVRWVHSAKAFLYARVQALESFLETVEARLERSRLLLERLRKEESKDRKTQLSTNLSGRKEPTRIARIKRTLDKVGLRVIGEN 927
L ELE+ K E DA++ LA EM VGI+ +QV VEVLAA +R T L G+SDPYCVCYLKVPDS +A R Q G TYF E+TL+PKWSGQRF+FKVPP A RKRGHGVRVLVLSRNL+RPNDF+GQADVPLSLLQDERE VGWFPLNRRSSRLMH+AAGDKITGSV+LRV+WV S +A L +R++ LE FL TVEARL+R+RLL+ERL KEE+KDRKTQL + GRKE ++IAR+KR L+K+G + IG +
Sbjct: 430 LRELERRLGMNEPKVLEVLDAERVLANEMRVGISETHQVFVEVLAAASLRPTGLQGYSDPYCVCYLKVPDSTGGSKSADDRFRGQGGETYFCEKTLNPKWSGQRFIFKVPPAAVQRKRGHGVRVLVLSRNLVRPNDFLGQADVPLSLLQDEREHVGWFPLNRRSSRLMHLAAGDKITGSVKLRVQWVFSLEALLLSRIRDLELFLGTVEARLQRTRLLIERLNKEEAKDRKTQLGMTVRGRKENSKIARLKRHLEKMGFKGIGSD 694
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: A0A836CLN4_9STRA (C2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN4_9STRA) HSP 1 Score: 171 bits (432), Expect = 8.520e-49 Identity = 88/159 (55.35%), Postives = 112/159 (70.44%), Query Frame = 1
Query: 250 QVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSPDINAGGNIRRQR--GVTYFVEQTLHPKWSGQRFVFKVPPEAALRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVGWFPLNRRSSRLMHMAAGDKI--TGSVQLRVRWVHSAKAFL 714
QV+VEVLAA G+R TDL G+++PYC+ YLK RRQR G TYF E+T+ PKW QR VF VP AA +RG+ +RV++LSR+ +RPND +GQA VPL LL D+RE VGWFPLN+R+SRLM ++ DK GSVQLR++WVH+ A L
Sbjct: 1 QVLVEVLAARGLRGTDLQGYANPYCIIYLKA-------TARRRRRQRPRGATYFCEKTVCPKWVDQRLVFTVPAAAARSQRGYSLRVMILSRDFLRPNDLLGQAAVPLDLLLDQREHVGWFPLNQRASRLMALSQMDKPGGCGSVQLRLQWVHTKTALL 152
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: A0A7R9UEG4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEG4_9STRA) HSP 1 Score: 123 bits (309), Expect = 5.550e-27 Identity = 67/199 (33.67%), Postives = 120/199 (60.30%), Query Frame = 1
Query: 235 ITAANQVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSPDINAGGNIRRQRGVTYFVEQTLHPKWSGQRFVFKVPPEAALRKRG-----HGVRVLVLSRNLI-RPNDFVGQADVPLSLLQDERERVGWFPLNRR-SSRLMHMAAGDKITGSVQLRVRWVHSAKAFLYARVQALESFLETVEARLERSRLLLERLRKEE 810
I+ +Q++V+++ A+ ++A+DLSG +DPY V +LK P + Q+ +TYF ++TL+P W Q F+F VP +AA K G + +R V ++L + +DF+GQ D+ L L D++E + W+PL R ++++ + + ++G ++LR +W+HS +A L R+ ET+EAR+ R +ER+++ E
Sbjct: 2150 ISRQHQLLVQIVEASDVQASDLSGFADPYVVVHLKTPGDRKALLYTSKWAQKQITYFCQKTLNPTWVDQYFLFNVPEQAAFPKHGEVDHDYRLRFRVFDKDLFPKGDDFLGQVDIRLKDLHDQQEHMEWYPLQARPGNKILSFSPEEGVSGQLRLRCQWIHSFEALLRYRMGLCAYRYETLEARMSGHRKAVERIQQAE 2348
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: A0A7S2UEQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UEQ3_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.950e-25 Identity = 66/161 (40.99%), Postives = 96/161 (59.63%), Query Frame = 1
Query: 235 ITAANQVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSPDINAGGNIRRQRGVTYFVEQTLHPKWSGQRFVFKVPPEAALRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVGWFPLNRRSSRL-MHMAAGDKITGSVQLRVRWVHSAKAFL 714
I+ NQVV+EVL G++A L+G S+PYC LK N +R TY+VE+TL PKW Q FVF+VP EAA RGH ++V + + L+ +GQA+V L L+++RE V W+PL R+ + ++ + GSV+LRV+W++S A L
Sbjct: 114 ISQCNQVVIEVLECAGLKAVYLNGLSNPYCEVILKTRSQGKRNLFSKKAIKRK-TYYVEKTLSPKWINQTFVFEVPSEAANVTRGHSIQVQLRNFGLLGKRAHLGQAEVHLRSLRNQRELVCWYPLRGRTGHQELQKSSAEGGRGSVKLRVQWIYSVPALL 273
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: A0A7S4MN01_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MN01_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.410e-24 Identity = 66/167 (39.52%), Postives = 103/167 (61.68%), Query Frame = 1
Query: 235 ITAANQVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSPDINAGGNIRRQRGV---TYFVEQTLHPKWSGQR--FVFKVPPEAALRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVGWFPLNRRSSRLMHM--AAGDKITGSVQLRVRWVHSAKAFL 714
I++ +QV+VEV+ A ++A +++G S+PY LK S G N+ ++ + TY++EQTL PKWS Q FVF VPPEAA RGH ++V + S ++ + +G +V L L+++RE VGW+PL RSS + + ++ GSV+LRV+W++S A L
Sbjct: 1810 ISSCHQVLVEVIEAAELKAGNVNGLSNPYAEVSLK---SRSNRKGKNLFAKKELNRRTYYIEQTLSPKWSHQPQIFVFNVPPEAAEMTRGHTIKVKLRSFGVLGSHTHLGTTEVHLRSLKNQRELVGWYPLMSRSSGRSELTQSLSSRVRGSVRLRVQWIYSVPALL 1973
BLAST of mRNA_F-serratus_M_contig663.17632.1 vs. uniprot
Match: B8CBY6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CBY6_THAPS) HSP 1 Score: 110 bits (274), Expect = 2.000e-22 Identity = 65/164 (39.63%), Postives = 92/164 (56.10%), Query Frame = 1
Query: 235 ITAANQVVVEVLAATGIRATDLSGHSDPYCVCYLKVPDSPDINAGGNIRRQRGVTYFVEQTLHPKWSGQRFVFKVPPEAA---LRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVGWFPL-NRRSSRLMHMAAGDKITGSVQLRVRWVHSAKAFL 714
IT NQV+V+VL ATG+ ++DL+G SDPYC LK S + ++ TYFVE+TL P+WS Q FVF VP +AA R ++ + S + F+GQ V L L+D++E V W+PL + R + D+ GS++LRV+WVH L
Sbjct: 4149 ITKTNQVIVQVLEATGLLSSDLNGLSDPYCQVSLKKHTSSFKS------KETRSTYFVEKTLSPQWSQQSFVFDVPAKAAHDPKETRHFSLQCAIKSIQRFSKDKFLGQTHVQLRNLKDQKESVSWYPLMGKLGQREISKDLADRSRGSLKLRVQWVHDYTGLL 4306
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 336.7 |
| Seed ortholog evalue | 1.4e-89 |
| Seed eggNOG ortholog | 2880.D7G8Y9 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization |
| EggNOG OGs | COG5043@1,KOG1809@2759 |
| COG Functional cat. | U |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Exons | 7 |
| Model size | 1111 |
| Cds size | 1110 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932037.0308173-CDS-F-serratus_M_contig663:118046..118313 | 1622932037.0308173-CDS-F-serratus_M_contig663:118046..118313 | Fucus serratus male | CDS | F-serratus_M_contig663 118047..118313 - |
| 1690964114.3836632-CDS-F-serratus_M_contig663:118046..118313 | 1690964114.3836632-CDS-F-serratus_M_contig663:118046..118313 | Fucus serratus male | CDS | F-serratus_M_contig663 118047..118313 - |
| 1622932037.0510716-CDS-F-serratus_M_contig663:119849..119954 | 1622932037.0510716-CDS-F-serratus_M_contig663:119849..119954 | Fucus serratus male | CDS | F-serratus_M_contig663 119850..119954 - |
| 1690964114.3973105-CDS-F-serratus_M_contig663:119849..119954 | 1690964114.3973105-CDS-F-serratus_M_contig663:119849..119954 | Fucus serratus male | CDS | F-serratus_M_contig663 119850..119954 - |
| 1622932037.067667-CDS-F-serratus_M_contig663:120706..120865 | 1622932037.067667-CDS-F-serratus_M_contig663:120706..120865 | Fucus serratus male | CDS | F-serratus_M_contig663 120707..120865 - |
| 1690964114.4172552-CDS-F-serratus_M_contig663:120706..120865 | 1690964114.4172552-CDS-F-serratus_M_contig663:120706..120865 | Fucus serratus male | CDS | F-serratus_M_contig663 120707..120865 - |
| 1622932037.0821226-CDS-F-serratus_M_contig663:121602..121725 | 1622932037.0821226-CDS-F-serratus_M_contig663:121602..121725 | Fucus serratus male | CDS | F-serratus_M_contig663 121603..121725 - |
| 1690964114.4335053-CDS-F-serratus_M_contig663:121602..121725 | 1690964114.4335053-CDS-F-serratus_M_contig663:121602..121725 | Fucus serratus male | CDS | F-serratus_M_contig663 121603..121725 - |
| 1622932037.0989337-CDS-F-serratus_M_contig663:122354..122546 | 1622932037.0989337-CDS-F-serratus_M_contig663:122354..122546 | Fucus serratus male | CDS | F-serratus_M_contig663 122355..122546 - |
| 1690964114.445205-CDS-F-serratus_M_contig663:122354..122546 | 1690964114.445205-CDS-F-serratus_M_contig663:122354..122546 | Fucus serratus male | CDS | F-serratus_M_contig663 122355..122546 - |
| 1622932037.1153846-CDS-F-serratus_M_contig663:124520..124604 | 1622932037.1153846-CDS-F-serratus_M_contig663:124520..124604 | Fucus serratus male | CDS | F-serratus_M_contig663 124521..124604 - |
| 1690964114.4551036-CDS-F-serratus_M_contig663:124520..124604 | 1690964114.4551036-CDS-F-serratus_M_contig663:124520..124604 | Fucus serratus male | CDS | F-serratus_M_contig663 124521..124604 - |
| 1622932037.13188-CDS-F-serratus_M_contig663:125338..125518 | 1622932037.13188-CDS-F-serratus_M_contig663:125338..125518 | Fucus serratus male | CDS | F-serratus_M_contig663 125339..125518 - |
| 1690964114.4656897-CDS-F-serratus_M_contig663:125338..125518 | 1690964114.4656897-CDS-F-serratus_M_contig663:125338..125518 | Fucus serratus male | CDS | F-serratus_M_contig663 125339..125518 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig663.17632.1 >prot_F-serratus_M_contig663.17632.1 ID=prot_F-serratus_M_contig663.17632.1|Name=mRNA_F-serratus_M_contig663.17632.1|organism=Fucus serratus male|type=polypeptide|length=370bp
VTESRAEDGRAESSVRSSITGLVELEASTSEAGPPRSTSAQTDSHMVEYL HELEKAANQKGTEFSDAQQALATEMEVGITAANQVVVEVLAATGIRATDL SGHSDPYCVCYLKVPDSPDINAGGNIRRQRGVTYFVEQTLHPKWSGQRFV FKVPPEAALRKRGHGVRVLVLSRNLIRPNDFVGQADVPLSLLQDERERVG WFPLNRRSSRLMHMAAGDKITGSVQLRVRWVHSAKAFLYARVQALESFLE TVEARLERSRLLLERLRKEESKDRKTQLSTNLSGRKEPTRIARIKRTLDK VGLRVIGENKVVNNARRRAGLFTLSDHRENARGVIASGGDVSVVAPNNPS PKRTRSALGGRRLTAWTFAS back to topmRNA from alignment at F-serratus_M_contig663:118047..125518- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig663.17632.1 ID=mRNA_F-serratus_M_contig663.17632.1|Name=mRNA_F-serratus_M_contig663.17632.1|organism=Fucus serratus male|type=mRNA|length=7472bp|location=Sequence derived from alignment at F-serratus_M_contig663:118047..125518- (Fucus serratus male) GTGACCGAGAGTCGTGCGGAGGATGGACGCGCCGAATCGTCCGTGAGATC
ATCAATAACGGGTTTGGTAGAATTGGAGGCGTCTACTTCGGAGGCGGGGC
CGCCACGTTCGACCTCCGCACAGACCGATTCACACATGGTAGAGTACCTG
CACGAGCTGGAGAAAGCCGCCAACCAGAAGGTGGGCTATAAGCCGGGTTC
TGCACTTTTTTGTTTCTGTTTTTGTTTTCCATTTTTCTTGGCTCGGTCAA
TGGCATCCCAGCTCGGAGCCACGACCTGTCAGATTCGGTCGGGTCTGTTG
ACCCTCAAGACAGTGTTTTCCCTTCCCATCTTCGCAAGGTGTTCGTCGCG
AAAATCTTCCCCGATATCTGTGTTTGAGATGAGCGTTATCTCATCGCCTA
CGTGTGTCCACTTTTTTTTTCCCCTCTTCTTTTTGACTTCTCGTTCGATA
TATATGTATATGCTCTAGATATGTACTATATAAATGTATATTTTAAATTT
AATCTAATACACACCCGGAAAGACATTGGTATCAAGTTTCGCCACATTTC
AGTGTAGTTTTTTTTTCTCGTCAAAATAATTTGAAAATAATAATTTCCTT
TGTGTACCGTAGTCGTACAGCTGTGTAACCATTAGAGGAGATTTCGCCTC
TTTGGCGGGGGAGCTCAAATATTTGCTGGTATGTTGAGAACGAGCCAGTG
CCCTTCGAGCTGGTTCTGTTTTTTTCTCCATTTTACAGCTGAAACCGTTA
TTTTTTTCGATCGAGACGCTTACCGACGCTCGAACCGGCTCAGCGTTGAC
CTTTCTGCCTTCGTTGCCTAGAGGCCGACATCGATGGTCCTGAAAGTCTC
AACAGGTAACGTCCCCTGTTTCCGTTCGATGCCGTTACGCCGTTTGATGC
CGGCGTGGTCGAAGGGAACGGAGTTTTCGGACGCGCAGCAGGCGTTGGCG
ACCGAGATGGAGGTGGGCATTACGGCAGCCAACCAAGTCGTTGTCGAGGT
ACGTCGTGGTCGAGGTCCTCTTCTGTCTCCATACCTCGGGACTGCTGCTT
TTGGGTTGTCGTAATAAATGGTCTCGGTGTTACTGTGGGAAAGCAAGTAC
TACTCCAAGTCTGTACTGGACAATGGCGGGATATGACAACTCACCCCCGG
AGAGTATAAAATCACCCCGACGGGGTGATTGGAGTATATAAAGGACAGCG
GTTGTACCGTACTTGAAAAGGAAGGAAACCTCAACTATCATCCGGGTCCA
AGGCATTGAAGCTGAACATCGCGGGGAATTTGGCCTCCGGGGATTTTAGT
CCCCGAGGCTCCTACTCGTGAAGTGATCGCTCGCTCATCCAGCGCAACGA
GAGAATTGATTGCGACCTGACGGGTGCCTGCCGACGAAGCGTCCACACCT
TGTGGCACGGGTTTCGCCGACGCTGCGCTGAGAAGCCACGGCGCGATAAA
AACTTGCGATCGCATATTCGATTGTGTATTTTTGTTTTCCCCCTTGTGGC
GCCACGCCGCAAACATCATAGTGTGTTCATCAATATATGTACACTGCATA
GGCTCTACGGAAATGCTACCATATCCTGCTTACCGCGTTTGTGCTTTGCT
CCCCGTTACCTTCAATGACGTCCTGTATACTTTTGTTTCTGGTTTCCTCT
AGCATGTGTCTACGGTACGTATCCTGTAGAATGCCGGAAGAGTTCCCTTG
TTTTTTATGCTCAGTCGCAGTCGCCCCGGTGGTGCAGTTGGTAACCTCGA
AACCTTCCGACATTGGGACGTGAGTTCGAATCTCGGTGTCGTCACACGAA
CTGGGATTTTTCCTCACAAAATGAATAAAAAAATCCAACCAAGTGGCGAA
CGATTGATTCGTTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAA
GGAACGGCTGAATCCTTCTCGCGAGAAAAATGTAGGCAAGCGCCGCTTAA
GGAATATGGAGAAGTCCCTGTGTGACCTTCCTCCTATGTGACCCCAGCTG
GTACGTCCACAAACCTGACGTTCAGAATAAAAAGGATGACAACACACACA
CATACCTCCCCTTTAGCGCGTCTGATCAGAGGTTCTCGTAATAAGTATCA
TTGATCCCCCCTCGGGAGGATCAATGCGATGCGAGTGGCATAGAATGACT
AGGATGACAGGGCCGGATTGCGTGGTTATGTGCAATTTAATAAATACACA
CACACACACACACACACACAAAGAGGAAGATATGTAGAAAAGAAAGGGTC
GGTCCAGTAGCTGCCAACCCAGTTAATGTAGAGAGTAACAAGGAAGCAGG
GGGGGGGCACAAGGAACTCTGGGCTTAAGTAAGAATTGTACAAGTAGAGA
GAGTGTGTCCCCTTTGTCGCGTCTGATCAGAGGTTTTCGTAATAAGTATC
ATTGATCCCCCTCGGGAGGATCAATGCGAGTGGCATAGAATGACTAGGAT
GACAGGGCCGGATTGCGCGGTTGTGTGCAATTTAATAAATACACACACAC
ACACACACACACACACACACACACACACATAGTTATATACTAGATTTCAC
GTGGAAAGACGTGGCTGGAACACATTTTCATAATAATAAGTGTACAATAT
TTAGTGGTGTGTAACATCCCTCCAGCCCTCATATTTACTCGACGTTACAC
CGGTGGCACAGACGGAAAATTATACTCGAGTGTAGAGTATAGCGATATGT
TTTTCAAAACAGGTTCACGATTGTCTTAGCTGTTTTGGTACGGAGAAAAT
CGAGCGAGGAAACACACCAAACATCATCCCCTATCCCCATTAGATTGCAT
ATATCTTAATACATCATTTTTATATCCTAAAGTGTCATCACCCTTGGTCG
ATCTTTGCACACGGCGTGGGACTGAGGGAATGAGCTGTCTCGTCTAATGG
TGCCAACGCTAGGAAGGGACGCAGTAAAACGCAACGATAGCAACAACAAT
ATGAATGCGACGTCGTTTTCAGGTGTTGGCTGCGACTGGCATCCGAGCCA
CGGACCTCTCCGGCCACTCAGACCCGTACTGCGTGTGCTACCTCAAGGTC
CCCGACTCTCCGGACATAAACGCGGGCGGCAACATCCGACGGCAGCGTGG
AGTAACGTACTTTGTCGAGCAGACGCTACACCCCAAGTGGTCAGGACAGC
GGTTCGTGTTCAAGGTATTGCGCGACAAGTACTGCTGTAGGTATTGTGTG
ATTGGTTGATTGATTGATTGAATTCTCACCTAAGCTGACCCGTGGTCACG
AGGTAGAAAACACAATCTGGAAGGAAAACGTACAATGTACTCTCCTCTCC
ATACAAAAAGGAAAATGCGCTGGTACATGATACTCGGAAAAAGCGACGCC
TCCAAAGTAAAAAGAAAAGATAACGAAGGAGGACGCAGACAGTTGTGGAC
CAACTGCGTGTGGCTGTCAGGGCGCATGCATATCGAAGAACGATTGAACG
ATGGGCCGCGGGTTCAACGAAAACAAAAAAGTCAAAAACGGGGGGAGGAG
GGGAGCGATGTAGCATCGGCAAAAACAAAAATGTGTCTGGTGTCATATAG
TACGTTGTTTTAAGGTACTTCGAAAAAACAAGACAGCAGTACATCGCACA
TATTTTAATTGCAAAAAAGAGTGTAGAATATACTTGAATATAGTTTGATA
AAGCAAATTACCCTAACCTACAATATGCTACATTTACGAGATATTTTCAT
ATATATATACGCACCATTCCTTCTGTCAGAGAGAGAACATTATATACGAA
TGTCGTAAAAACGCGGATTACCTTGTCCTCCCCCGTGACGCAGGTTCCTC
CGGAGGCAGCCCTACGCAAGCGCGGCCATGGGGTGCGAGTGCTGGTCCTA
TCCCGGAATCTGATCCGCCCGAACGATTTTGTCGGCCAGGCGGATGTGCC
TCTTTCTCTTCTGCAGGTACAGTCAAAAGCAGTACTCGTACGGTAGCGCT
AGAGTCTTTGAGCCGTAAAGCTGTGTTATTTGTGTTATCCTATGAAATGA
ATGTGCATGGGGCAAAATAACGCCTTTTGTGGTGGAAACCCAGTCGAGGC
GATTAATGAGTGTGTTTGATTTTAGGAGACGGAACGGAAGAAATAATAAC
CACGAAAAGACAAAATAATTTTGGGGCATTTGAGTCGAAAACATTGGTGA
GATTACTGTAAACGATATACATGTACTGTGGGTAAAGACCTACTATTAAT
AGTACATACGGTATTATTTTGGCGATAGCGATCGCAATTCTTTTCTTTTC
CTTTCTTCAGCTGCGAGCATTCCTCCCTTTCCGGTAGCCCTTTTAGACCT
TACATATTCGTATGAAGAATATCCTGGTATCAAAATGTAGTTAAGAAAAA
CAATAAAAAAAGAGACCTGCTTCCAACCTTTTCTAGGTGGACCATTCTCC
GCCAATACCTTTTTCTTGCATATAATCAGACGTACGGGTACTCTAAGATC
CCAGTCTTTCGCCTTCGTTCGTTTCTTTCAACCTGGGCAAGCAACGACCC
CCTACTCCACCGCAGCAGCGCCGAATCATATTTTCCCGACAATCTCCTCC
GGCCAGCGAAGCCATTTTACCAGGAGACACCTGCGGAAGACCAGCTAATA
TGGATGCCCATGCCCTGTAGCCCATCACGCACCCTACTGATGTTCCTTGA
CAGGATGAGAGGGAACGCGTGGGCTGGTTCCCTCTGAATCGCCGCAGCTC
CCGCCTGATGCATATGGCGGCTGGGGACAAGATCACGGGCTCGGTGCAGC
TGCGAGTGCGCTGGGTCCACTCCGCCAAAGCTTTTCTCTATGCTAGGGTG
CAGGCGCTGGAGGTGAGGGTGGATCGGGCGGGCGCAGATCGATGCCGAGA
GGCGATGTTGTACATCGCTTTATCGAGAAGGAACAACTCTCTATATATTA
AAAAAAAACGGTCCACTCTTTAAACGGATAGATAGACACACATTTCCCTT
GTTTGTTGCGGGAAGTCTTCATGTGAAATGAATATCCTTAGACTCACTCA
ACCATAATGCTATAAACTCTGTGCCAAACCCTAGTGCTGTATTCAAAACG
CACTTGGTTTCGATTATCATATATATTTTTTGTCTTTTTCACCTGATGTG
GACGAGGATGGTCAAACGGGGAATTTGGTCCGCCCTCCACTGTGGCCGTC
TTGTACCATCATGGAATGACGTGTTGTGTTATATTGAAAGCAGCCGTGTT
ATCCATTTGAGGTCATCGTGGAAAGGTTGTTCAGGGCTTAGAGCTATAGA
CTTGGTGATACTGGTTCCATTTTTTTTTGTAAAGACGGAAAGCGGGGGTA
TCTCCCGCAATCGACTGAATCCTCAAGACTTTCAAAGGGGTAAAAATATT
GCCTATGCTCGATATTCCTTACAAACCAGAAACTGGTTGTACGTCGATGA
TATACGTGTGCGGGTTATCAAATGACCTCGATATCGCCTGAAGATGAAAA
TTGATCGGTTTGTTCGCTTCGAGACGTGGTCACGGGCCCCGAAATGATTG
TGAACACTATCGTCCTCCCCTTTCCGTCATCCCCCTTGTTGCCCTTTCCT
CGACGATCGATCAGTCCTTCCTCGAGACCGTGGAGGCCAGACTGGAACGA
TCGCGACTGCTTCTTGAACGCCTTCGGAAGGAAGAATCCAAGGATCGGAA
AACTCAGCTCAGCACCAACGTGAGCACCACCCTACCTATATGTACATCTT
ACTATTATATGTTCCAAACGTTTTTTTTTCATGAAGGGTGGAAGAGCAAA
GTCTCTCTGGTCAAAAATAGCGTGCCCTGGAAAGACGAAAACAGTATACC
CAGCGCCCCTGGTGAACGCGGGGAGAAACCCCCTCCCAAGTAAATCAAGA
TTGTCCCAAATAAGATAAATCAAGATTTTCAAACAGGGCATGGGCACAGG
TGTTGGTTTAACCAAACAGGGGGCGCTCACGAAAAGGAACATACGGCACA
TTCATGATTGGTCAAAGTGCCCCGTACTATAATATAATAGGGGCGAAATC
ACGTCAAACGATTGTGGTGAATGAACATCTCATCAAAGCGATATCGAATG
ACTTTCTACCCAATTGACTTTATGCGGAAACTTGGGCGTAGGGTGATGAT
CCGTGTTCAGCAACCCAGACCATTTCGTAACATAGCTTGTAACATAATTC
CCGAAGCATGTTGTTTGTAGTATGTGTGTGTGCGTGTCCGTGTGAGATGG
TGTGTTATTCTCTTGTGTATCGGTCCCACAAGCGCTTGTTGTTAGGATTT
TACATATTTGTGTTTTTGATATTATTATACTATGTGATCGGTGTTGTATG
TTTCCAGTTTGAACACGCATTTTTGTTTCATGTTTACGTTAACTAGTCTT
TATGAATGTATATTTTTGAGTACCGCGAGCGTTTTTATCGTAGCTCTCCG
TTCGTGCGTGCTCTTGAAAAATAGCAATGGAAATTAGAGGTTTTTACAGG
CGGCGGTTGTTGATGTTATGTTACTGTTCGCTTGTAAAAAGGCGATGAAC
TAATAATATGGGCGGTGAACCATTGTTTGTGGCAGTGAGCTATAAACAAT
GGCGGTTGAATATTGCTATTATAAGAAACAGTACTGTTTTATTGTTTTTG
TTATTGTATCTTACTTACGGCCGATCGGCTTCAACCTGCTAGGTTACCAA
TCCTACTTACTGCAACGTTACCATCCTGCCTGTAGTCACTAAAGATATTC
TCATCTCTCCCTGGTTCTCGCCTACGAATTTGTATCGCGATGCAAGCTCA
GCACTCTCACACCTCGTCAACTAATGGCTGGATTTTACCTACTCACGCTT
TCCTTCACGGAAGCCAGAATAAAACAATAATCCTTCCAAGAATCGAACTC
CCGAACCCGCACTGGTGAAACTTCGACGTAATGCACTACTCCACTCGAGC
TACGGTTGCGGTTGTATAATCTTGGGAGCGGCGAAATGTGATCTGATTGT
GTCGATTAACTTGATAAGTAGGGGCGGTCGATAATTACTTGTGGTGGTTG
GCCTCGTGCATTTATATAATATAGTCACGTTTAATTAATTTTTGTTACGG
TTAACTATTGTTTGTTACGTTTACAAATCACTGTGACGGTTAACTAGTTA
TTGTGACGGTGAAACAGTAATTGTGGTGGTTAACTAATTATTGTGACGGT
TAACTAATTATCGTGACGGTGCTCGCGACCGCGCTTCCAACTCTCACGAG
AGCAGCTGAGTGGGAGAAAAGAACCGACGCGGATCGCCAGGATCAAAAGA
ACCCTCGACAAGGTGGGTCTCAGGGTGATCGGAGAAAATAAGGTTGTCAA
CAACGCCCGTCGCAGGGCGGGGTTGTTCACCCTAAGCGATCACCGCGAGA
ACGCTCGAGGTGTCATCGCGTCCGGCGGGGACGTCAGCGTCGTGGCCCCG
AATAATCCGAGTCCCAAGCGGACGCGCTCGGCCCTGGGCGGGAGGCGGCT
GACTGCGTGGACGTTTGCGAGC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig663:118047..125518- >mRNA_F-serratus_M_contig663.17632.1 ID=mRNA_F-serratus_M_contig663.17632.1|Name=mRNA_F-serratus_M_contig663.17632.1|organism=Fucus serratus male|type=CDS|length=2220bp|location=Sequence derived from alignment at F-serratus_M_contig663:118047..125518- (Fucus serratus male) GTGACCGAGAGTCGTGCGGAGGATGGACGCGCCGAATCGTCCGTGAGATC ATCAATAACGGGTTTGGTAGAATTGGAGGCGTCTACTTCGGAGGCGGGGC CGCCACGTTCGACCTCCGCACAGACCGATTCACACATGGTAGAGTACCTG CACGAGCTGGAGAAAGCCGCCAACCAGAAGGTGACCGAGAGTCGTGCGGA GGATGGACGCGCCGAATCGTCCGTGAGATCATCAATAACGGGTTTGGTAG AATTGGAGGCGTCTACTTCGGAGGCGGGGCCGCCACGTTCGACCTCCGCA CAGACCGATTCACACATGGTAGAGTACCTGCACGAGCTGGAGAAAGCCGC CAACCAGAAGGGAACGGAGTTTTCGGACGCGCAGCAGGCGTTGGCGACCG AGATGGAGGTGGGCATTACGGCAGCCAACCAAGTCGTTGTCGAGGGAACG GAGTTTTCGGACGCGCAGCAGGCGTTGGCGACCGAGATGGAGGTGGGCAT TACGGCAGCCAACCAAGTCGTTGTCGAGGTGTTGGCTGCGACTGGCATCC GAGCCACGGACCTCTCCGGCCACTCAGACCCGTACTGCGTGTGCTACCTC AAGGTCCCCGACTCTCCGGACATAAACGCGGGCGGCAACATCCGACGGCA GCGTGGAGTAACGTACTTTGTCGAGCAGACGCTACACCCCAAGTGGTCAG GACAGCGGTTCGTGTTCAAGGTGTTGGCTGCGACTGGCATCCGAGCCACG GACCTCTCCGGCCACTCAGACCCGTACTGCGTGTGCTACCTCAAGGTCCC CGACTCTCCGGACATAAACGCGGGCGGCAACATCCGACGGCAGCGTGGAG TAACGTACTTTGTCGAGCAGACGCTACACCCCAAGTGGTCAGGACAGCGG TTCGTGTTCAAGGTTCCTCCGGAGGCAGCCCTACGCAAGCGCGGCCATGG GGTGCGAGTGCTGGTCCTATCCCGGAATCTGATCCGCCCGAACGATTTTG TCGGCCAGGCGGATGTGCCTCTTTCTCTTCTGCAGGTTCCTCCGGAGGCA GCCCTACGCAAGCGCGGCCATGGGGTGCGAGTGCTGGTCCTATCCCGGAA TCTGATCCGCCCGAACGATTTTGTCGGCCAGGCGGATGTGCCTCTTTCTC TTCTGCAGGATGAGAGGGAACGCGTGGGCTGGTTCCCTCTGAATCGCCGC AGCTCCCGCCTGATGCATATGGCGGCTGGGGACAAGATCACGGGCTCGGT GCAGCTGCGAGTGCGCTGGGTCCACTCCGCCAAAGCTTTTCTCTATGCTA GGGTGCAGGCGCTGGAGGATGAGAGGGAACGCGTGGGCTGGTTCCCTCTG AATCGCCGCAGCTCCCGCCTGATGCATATGGCGGCTGGGGACAAGATCAC GGGCTCGGTGCAGCTGCGAGTGCGCTGGGTCCACTCCGCCAAAGCTTTTC TCTATGCTAGGGTGCAGGCGCTGGAGTCCTTCCTCGAGACCGTGGAGGCC AGACTGGAACGATCGCGACTGCTTCTTGAACGCCTTCGGAAGGAAGAATC CAAGGATCGGAAAACTCAGCTCAGCACCAACTCCTTCCTCGAGACCGTGG AGGCCAGACTGGAACGATCGCGACTGCTTCTTGAACGCCTTCGGAAGGAA GAATCCAAGGATCGGAAAACTCAGCTCAGCACCAACCTGAGTGGGAGAAA AGAACCGACGCGGATCGCCAGGATCAAAAGAACCCTCGACAAGGTGGGTC TCAGGGTGATCGGAGAAAATAAGGTTGTCAACAACGCCCGTCGCAGGGCG GGGTTGTTCACCCTAAGCGATCACCGCGAGAACGCTCGAGGTGTCATCGC GTCCGGCGGGGACGTCAGCGTCGTGGCCCCGAATAATCCGAGTCCCAAGC GGACGCGCTCGGCCCTGGGCGGGAGGCGGCTGACTGCGTGGACGTTTGCG AGCCTGAGTGGGAGAAAAGAACCGACGCGGATCGCCAGGATCAAAAGAAC CCTCGACAAGGTGGGTCTCAGGGTGATCGGAGAAAATAAGGTTGTCAACA ACGCCCGTCGCAGGGCGGGGTTGTTCACCCTAAGCGATCACCGCGAGAAC GCTCGAGGTGTCATCGCGTCCGGCGGGGACGTCAGCGTCGTGGCCCCGAA TAATCCGAGTCCCAAGCGGACGCGCTCGGCCCTGGGCGGGAGGCGGCTGA CTGCGTGGACGTTTGCGAGC back to top
|