mRNA_F-serratus_M_contig1232.1763.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: D8LFC8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFC8_ECTSI) HSP 1 Score: 213 bits (543), Expect = 2.540e-64 Identity = 115/250 (46.00%), Postives = 139/250 (55.60%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRA--------------------------------------WGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRES-------------------------------------ITPEGVLDGGHSEQIRTFDWLGRSVATGGEDAKICLWRVPGDGLD 525
FHP K SF+LTGSEDGLMC++DT VS EEDALDSV+NAEC VR++GFFG E + VYCC+NTETLS+W A AQRI D+GDVRAL WG+ VD IV C+Y+A DRL L+ + G ACLAT+S E ITP+ VL+GGH+EQIRTF W+GR++ATGGEDA+IC WR+PG G D
Sbjct: 184 FHPHKRSFMLTGSEDGLMCFFDTEVSLEEDALDSVMNAECPVRSVGFFGPEGEGVYCCTNTETLSLWHAAGAQRIKDFGDVRALARGENLADADVGAGDGATAXXXXXXXXXXXXXXXXXXXXXXGEDWGVAVDCIVDCQYDAAADRLRLVTSSYAGGACLATVSAEGTVSCSGQVTVCAGTGQRQSKGRDRVVIGANSRAEKQGITPDAVLEGGHAEQIRTFQWMGRAMATGGEDARICSWRLPGGGED 433
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: D7G3A5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A5_ECTSI) HSP 1 Score: 154 bits (390), Expect = 3.260e-44 Identity = 90/206 (43.69%), Postives = 116/206 (56.31%), Query Frame = 1
Query: 25 LLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDV-RAL---KVPRRA-----------------------------------WGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRESITPEGVLDGGHSEQIRTFDWLGRSVATGGEDAKICLWRVPGDGLD 525
+LTGSEDGL+ ALDSV+NAE VR++GFFGLE + V+CC+NT+TLS W A AQR+ D+GDV RAL ++P A WG VDY+V C+Y+A DRL L+ G ACLAT+S E GGH+EQ+RT W+G+++ATGGEDA+IC WR+P G D
Sbjct: 1 MLTGSEDGLV-----------HALDSVMNAEFPVRSVGFFGLEEEGVHCCTNTDTLSFWYAAGAQRVKDFGDVVRALASGELPADADGGVXXXXXXXXXXXXXXXXXXXXXXXXXXVAGDDWGFAVDYLVDCQYDATADRLRLVTSSDSGGACLATVSPE---------GGHAEQVRTSQWMGQAMATGGEDARICSWRLPRGGED 186
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A0P1A6C2_PLAHL (WD40 repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6C2_PLAHL) HSP 1 Score: 138 bits (348), Expect = 4.240e-36 Identity = 64/178 (35.96%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRES-----ITPEGVLDGGHSEQIRT--FDWLGRSVATGGEDAKICLWRVPG 513
FHP + +F++T SEDG++C++D + E+DA++S+LN E AV T+GFFG + ++++C + TET+ +W+ A+R+ Y +R G+ DY++ C YE + + L+L+AG G+ + T+ ++ I E L+ GH IR +D ++ TGGED ++C W VPG
Sbjct: 167 FHPTQQAFVVTASEDGVVCFFDCRIPDEDDAIESILNVESAVTTIGFFGPQRENIFCLTGTETIDLWNIWTAERLHHYDTIRD---DCNKSGIATDYLIDCVYEDQSNELFLLAGNHNGDLNIVTIGTDATSAGQIKHEMALESGHKACIRCIYYDSENSTLYTGGEDTRLCKWAVPG 341
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: G4Z594_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4Z594_PHYSP) HSP 1 Score: 137 bits (345), Expect = 1.550e-35 Identity = 64/178 (35.96%), Postives = 108/178 (60.67%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRESITPEGV-----LDGGHSEQIRT--FDWLGRSVATGGEDAKICLWRVPG 513
FHP + +F++T SEDG++C++D + E+DAL+S+LN E A+ +GFFG + ++++C + TETL +W+ AQR+ Y +R A GLP DY++ C Y+ + + L+L+AG +G+ + + + + L GGH +R +D ++ +GGEDA++C W VPG
Sbjct: 176 FHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAITNIGFFGPQKENIFCLTGTETLDLWNLWTAQRLHHYATIRD---DCNANGLPTDYLIDCLYDDQSNELFLLAGNHDGDMNAVNIGTDQASAGKLQHAAPLKGGHKACVRCVYYDPDSATLYSGGEDARLCRWTVPG 350
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A835YUF3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF3_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.980e-35 Identity = 69/177 (38.98%), Postives = 104/177 (58.76%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRESITPEGVLDG----GHSEQIRTFDWLGRSVATGGEDAKICLWRVPGDG 519
F P S L + SEDGL+C ++ ++ + + +VLNAEC VR +GFFG A V+ + +E LS+W +AQR+ ++G AL+ PR A DY+VGC+Y+A D L L+AG F GE ++ ++ + + GH+ +R FDW G+S+ TGGEDA++C W G
Sbjct: 145 FRPGAPSQLASASEDGLVCVFEAAAAAGAEPVVAVLNAECPVRRVGFFGPGAAGVWAATGSEGLSLWHAPSAQRVAEFGGA-ALRRPRGA----ADYLVGCRYDAAADTLALVAGTFGGEVQVSAVTPAGVAAPAAVGAAGARGHAAVVRAFDWAGQSLITGGEDARLCCWSFDSSG 316
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A3R7H5D5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H5D5_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.840e-35 Identity = 66/178 (37.08%), Postives = 104/178 (58.43%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLA-----TLSRESITPEGVLDGGHSEQIRT--FDWLGRSVATGGEDAKICLWRVPG 513
FHP + +F++T SEDG++C++D + E+DAL+S+LN E AV T+GFFG + ++++C + TETL +W+ A+R+ Y +R LP DY++ C Y+ + L+L+AG +G+ T S + L GGH IR +D ++ TGGED ++C W VPG
Sbjct: 174 FHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESILNVESAVTTIGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYATIRD---DCNNNSLPTDYLINCVYDDNSNELFLLAGNHDGDMNAVNIGTDTASAGKLQHAATLKGGHKAAIRCIYYDPETTTLYTGGEDTRLCKWAVPG 348
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A0W8D6X8_PHYNI (Replication factor C subunit 2 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D6X8_PHYNI) HSP 1 Score: 135 bits (340), Expect = 7.210e-35 Identity = 63/178 (35.39%), Postives = 107/178 (60.11%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRESITP-----EGVLDGGHSEQIRT--FDWLGRSVATGGEDAKICLWRVPG 513
FHP + +F++T SEDG++C++D + E+DAL+S++N E AV T+GFFG + ++++C + TETL +W+ A+R+ Y +R GL DY++ C Y+ + + L+L+AG +G+ T+ ++ + L GGH +R +D ++ TGGED ++C W VPG
Sbjct: 172 FHPTQPAFVVTASEDGVVCFFDCRIPDEDDALESIINVESAVTTVGFFGPQKENIFCLTGTETLDLWNLWTAERLHHYDTIRD---DCNKNGLATDYLIDCVYDDQSNELFLLAGNHDGDMNAVTIGTDAASAGKLQHAAALKGGHKACVRCIYYDPENTTLYTGGEDTRLCKWSVPG 346
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A2D4CEC4_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEC4_PYTIN) HSP 1 Score: 133 bits (335), Expect = 3.490e-34 Identity = 63/174 (36.21%), Postives = 105/174 (60.34%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLS--RESITPEGVLDGGHSEQIRT--FDWLGRSVATGGEDAKICLWRVP 510
FHP+ +++T SEDG++C++D + +E+DA++S+LN E AV +GFFG + ++++C + TETL +W+ A+RI Y + L+ A G+P DY++ C Y+A L+L+AG G + + + E + GGH IR+ +D ++ TGGEDA++C W P
Sbjct: 169 FHPLNPPYVVTASEDGVVCFFDCRIPNEDDAVESILNVESAVTKIGFFGPQYENIFCLTGTETLDLWNVWTAERIHHY---QTLREDCTANGVPTDYLIDCVYDAASTELFLLAGDHNGSLNVVNIGGGNAQLRHEAAMTGGHKACIRSAYYDAEQATLYTGGEDARLCRWSPP 339
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A197KCF8_9FUNG (WD40 repeat-like protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KCF8_9FUNG) HSP 1 Score: 133 bits (335), Expect = 4.100e-34 Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRESITPEGVLDGGHSEQIRTFDWLGRS--VATGGEDAKICLW 501
FHP + L+TGS DGL+C +D EE+ L V N ++ +G+FG A+ +YC S+ ETLS+W+ A I +GD+R + P A GL +DY + C+YE E RL+L+AG EG + + +S+ VL GGHSE +R+ W + + +GGEDAK+ LW
Sbjct: 172 FHPTNPARLMTGSVDGLICQFDLTDMDEEEGLMVVSNTGASINRIGYFGPNAEYIYCLSHMETLSLWNSEDADAIHQFGDIRGVSNP--AMGLTLDYGIDCQYEPESGRLFLLAGSNEGNINILHVKADSLQLCQVLSGGHSEIVRSTFWDSKRGILYSGGEDAKLGLW 338
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Match: A0A5D6XQS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQS7_9STRA) HSP 1 Score: 132 bits (333), Expect = 6.610e-34 Identity = 66/171 (38.60%), Postives = 105/171 (61.40%), Query Frame = 1
Query: 1 FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLEAQSVYCCSNTETLSIWDPAAAQRIIDYGDVRALKVPRRAWGLPVDYIVGCKYEAEEDRLWLMAGGFEGEACLATLSRESITPE--GVLDGGHSEQIRT--FDWLGRSVATGGEDAKICLW 501
FHP + F++T SEDG++C +D ++ E++A +S+L E AV +GFFG ++++C + +ETL +W+ AQR+ Y VR A G+P DY+V C Y+A+ L+L+AG +G A + ++ S E G L GGH +R +D + R++ TGGEDA++C W
Sbjct: 173 FHPTQRQFVVTASEDGVVCMFDYRITDEDEAAESILYVESAVTKIGFFGAHMENIFCLTGSETLDLWNLNTAQRLHHYDRVRD---DCNANGVPTDYLVDCVYDAQTAELFLLAGTHDGGANVVSVGLSSARLEHVGALMGGHKACVRCAYYDPVARTLFTGGEDARLCKW 340 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1232.1763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1232.1763.1 >prot_F-serratus_M_contig1232.1763.1 ID=prot_F-serratus_M_contig1232.1763.1|Name=mRNA_F-serratus_M_contig1232.1763.1|organism=Fucus serratus male|type=polypeptide|length=189bp FHPIKHSFLLTGSEDGLMCYYDTGVSSEEDALDSVLNAECAVRTLGFFGLback to top mRNA from alignment at F-serratus_M_contig1232:215779..216678- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1232.1763.1 ID=mRNA_F-serratus_M_contig1232.1763.1|Name=mRNA_F-serratus_M_contig1232.1763.1|organism=Fucus serratus male|type=mRNA|length=900bp|location=Sequence derived from alignment at F-serratus_M_contig1232:215779..216678- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1232:215779..216678- >mRNA_F-serratus_M_contig1232.1763.1 ID=mRNA_F-serratus_M_contig1232.1763.1|Name=mRNA_F-serratus_M_contig1232.1763.1|organism=Fucus serratus male|type=CDS|length=1134bp|location=Sequence derived from alignment at F-serratus_M_contig1232:215779..216678- (Fucus serratus male)back to top |