mRNA_F-serratus_M_contig6626.17625.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5JBD7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBD7_9PHAE) HSP 1 Score: 328 bits (841), Expect = 1.010e-97 Identity = 209/518 (40.35%), Postives = 290/518 (55.98%), Query Frame = 1
Query: 4 AAGYRVFCSGVDGNSGRAGQHGVGLAVKESIVRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTREQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRMGDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRKRIDYIITRQPHRKLVRNVSVHLQPY----ADSDHNIMSARIRLPGRFARNRKQRAPTGRKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVAL-FTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLRKACEKLREIIQAADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALS---LGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATI 1533
AAG+RVFC G + G HGVG+AVKES+ + +T+T E +ERLM+M LAG A+ FV A T+ +T K VFW L+S V R+PS + ++VL+DANARTG R+ D +VIG YGRD + NG LL FA +N+LAL NTFF KG T+NG D KR+DYI+TRQ H V NV V QP ADSDHN++ A + L GR A NR R +K +R+ + + R +L+ + T+ + T + +A FT LL A + + R+ R E A E+A T+R +AR+A+ G + + + L+ AC+ + ++ +L+ Y +LEE D+RG Y LK L G++ G Q+I ++DG LLR ++I RW R+F++LLNT S LN IIE + Q LGD P + E+ +A + + N KA G D LPAEL K+ D +L H I+V VW G+ P EWKDATI
Sbjct: 109 AAGFRVFCCGTE----TGGVHGVGIAVKESLCKTSTFTTEFIDERLMAMRLLLAGHRGAVNFVAASAPTEP--STASSKRVFWGKLDSLVRRIPSKECVYVLLDANARTGDRLDGGDGRVIGMYGRDEL--NDNGMLLLNFATENRLALTNTFFETRKGGIWHTYNGVSGNDCKRLDYILTRQAHHGRVSNVVVIPQPVRPVKADSDHNMVVATVNLGGRLAHNRAVRTKPKQKQFNRQELQFEAARCAVTNRLLLNLDTRLDERTTTAAELATDFTNALLDAARTTLGEEPRRRRTQEWCETPETRAALEQALTKRREARRAMRGNW-NSATWRVLKAACQGVATAVETVIHAHLDAYVTELEEIYKDRDMRGLYQRLKRSVGLSGRQAGGQQFITNKDGVLLRNRDDILQRWARFFSTLLNTKSPTLNPDIIERVTQRQATRDTQRLGDVPKLEEVARATKGLKNWKAPGHDSLPAELLKID--DDEPFVLGHLHTILVKVWNGGDFPLEWKDATI 615
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE) HSP 1 Score: 295 bits (754), Expect = 1.770e-83 Identity = 204/528 (38.64%), Postives = 285/528 (53.98%), Query Frame = 1
Query: 1 TAAGYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTG--RKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
T GY + SG G + G HGVG+A+KE++ V + T E + RLM + + G++ +TFVV Y T+T NT K FW L++ + V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L+NT+F PKG TF + K R+D+I+ RQ R+LVRN SV + DSDHN++ +R P R A NR+ R +G R ID + D R ++ T L E A T ++ A E+ P G +A H E EA E A++ L G L+ KA K R + A +++ E Y +LE+ D G+Y HLK ++GK+ ++Q I+DEDGK+LR P R RW R+F LLNT S ++ + ++Q PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D L FH I+V VW TG VPQ+WKDATIK
Sbjct: 29 THDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSEAQH-EISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL-DGDRGFLREFHAIVVDVWQTGNVPQQWKDATIK 550
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE) HSP 1 Score: 295 bits (754), Expect = 5.410e-83 Identity = 204/528 (38.64%), Postives = 285/528 (53.98%), Query Frame = 1
Query: 1 TAAGYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTG--RKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
T GY + SG G + G HGVG+A+KE++ V + T E + RLM + + G++ +TFVV Y T+T NT K FW L++ + V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L+NT+F PKG TF + K R+D+I+ RQ R+LVRN SV + DSDHN++ +R P R A NR+ R +G R ID + D R ++ T L E A T ++ A E+ P G +A H E EA E A++ L G L+ KA K R + A +++ E Y +LE+ D G+Y HLK ++GK+ ++Q I+DEDGK+LR P R RW R+F LLNT S ++ + ++Q PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D L FH I+V VW TG VPQ+WKDATIK
Sbjct: 141 THDGYVIIWSGARAGTKDKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSEAQH-EISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL-DGDRGFLREFHAIVVDVWQTGNVPQQWKDATIK 662
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE) HSP 1 Score: 271 bits (693), Expect = 4.390e-78 Identity = 193/522 (36.97%), Postives = 274/522 (52.49%), Query Frame = 1
Query: 10 GYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTGRK--SIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMP-GQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLRKACEKLREIIQAADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
GY + SG G + G HGVG+A+KE++ V + T E + RLM + + G++ +TFVV Y T+TV T K FW L++A+ V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L NT+ PKG TF + K R+D I+ RQ R+ VRNVSV + D DHN++ +R P R A +R+ R + ID + D +R V+S+ T L E A T T++ A E P ++ + +L+ T R+K AL TF G Y +LE+ D G+Y HLK ++GK+ ++Q I+DEDGK+LR P IR RW R+F LLNT S ++ + +++ PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D +L FH +V VW TG+VPQ+WKDATIK
Sbjct: 140 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLASDNQLSLTNTYVQTPKGGVQHTFQSSNKGKEKYRLDLILMRQTDRRFVRNVSVKCVDFKDPDHNLVLTTVRRPPRVAPHRRVRGNSESSWIRIDLERLRKDKHQRVAFQNRVSSRPPPTALRRPTGETAAELTATVMLAAAETAPLASAFEATLKAMLK------------TARKKRSSALQETFFEG---------------------------YVRQLEKKSREGDQAGFYRHLKM-IDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHEADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFL-DGDQGLLREFHATVVDVWQTGDVPQQWKDATIK 617
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE) HSP 1 Score: 275 bits (703), Expect = 1.380e-77 Identity = 198/525 (37.71%), Postives = 279/525 (53.14%), Query Frame = 1
Query: 10 GYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAP--TGRKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
GY + SG G + G+ GVG+A+KE++ V + E + RLM + + G++ +TFVV Y T+TV T K FW L++A+ V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L NT+F PKG TF + K R+D+I+ RQ R+ VRNVSV + DSDHN++ +RL R A NR+ R + R ID + D R +S+ T L E A T T E EA E + A++ L G + L+ KA K R I + A + + E Y +LE+ D G+Y HLK ++GK+ ++Q I+DEDGK+LR P IR RW R+F LLNT S ++ + +++ PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D +L FH I+V VW TG+VPQ+WKDATIK
Sbjct: 209 GYVIIWSGARAGTKDKRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQCSNKGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDHNLVLTTVRLRPRVAPNRRVRGNNRSSRIRIDLERLRKDKHLRVAFQNRASSRPPPTALRRPTGETAAELTAT----------------------------HEISEASKEIKAAQQQLRGASKNSACEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFL-DGDQGLLREFHAIVVDVWQTGDVPQQWKDATIK 700
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5KEC1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC1_9PHAE) HSP 1 Score: 278 bits (710), Expect = 2.690e-77 Identity = 196/523 (37.48%), Postives = 285/523 (54.49%), Query Frame = 1
Query: 10 GYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPA-DRKRIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTGRKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
GY + SG G G+ G GVG+A+KE++ V + T E + RLM + + G++ +TFVV Y T+TV T K FW L++A+ V S D+L +L+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L NT+ PKG F + + R+D+I RQ R+ VRNVSV + DSDHN++ +R P A R++R +G I D +R +S+ T L E A T T++ A E P G +A H E +A E + A++ L G + L+ KA K R I + A +++ E Y +LE+ D G++ H+K ++GK+ ++Q I+DEDGK+LR P IR RW R+F LLNT S ++ + +++ PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D +L FH I+V VW TG+VPQ+WKDATIK
Sbjct: 215 GYVIIWSGARAGTQGQEGGKGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVMLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLASDNQLSLTNTYSRTPKGGVQHAFQSSNKGKENYRLDFIFMRQTDRRFVRNVSVTRVNFKDSDHNLVLTTVRFPPCVAPTRQERGNSGNSRI-----RIDLER-------TSSRPPPTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGWYTSEAQH-EISDASKEIKAAQQQLRGASKNSACEATLKAMLKAARKKRSIARWRALEKFFEGYVRQLEKKSREGDQAGFHRHMKM-LDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFL-DGDQGLLREFHAIVVDVWQTGDVPQQWKDATIK 719
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5K6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H7_9PHAE) HSP 1 Score: 277 bits (708), Expect = 1.730e-76 Identity = 203/545 (37.25%), Postives = 287/545 (52.66%), Query Frame = 1
Query: 10 GYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTG--RKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSR--------------------VSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
GY + SG G + G HGVG+A+KE++ V + T E + RLM + + G++ +TFVV Y +T T K FW L++A+ V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L NT+F P+G TF + K R+D+I+ RQ R+ VRNVSV + DSD ++ +RL R A NR+ R +G R ID + D R +S+ T L E A T T++ A E P R SR G +A H E +A E + A++ L G + L+ KA K R I + A + + E +LE+ D G Y HLK ++GK+ ++Q I+DEDGK+LR P IR RW R+F LLNT S ++ + +++ PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D +L FH I+V VW TG+VPQ+WKDATIK
Sbjct: 27 GYVIIWSGARAGTKDKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPMETARTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLASDNQLSLTNTYFRTPEGGVQHTFRSSNKGKEKYRLDFILMRQTDRRFVRNVSVKRVDFKDSDQYLVLTTVRLSPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLRVAFQNRASSRPPPTALRRPTGETAAELTATVMSAAAETAPLARRCSRRXXXXXXXXXXXXXXXXXXXXGGWYTSEAQH-EISDASKEIKAAQQQLRGASKNSACEATLKAMLKAARKKRSIARWRALETFFESNVRQLEKKSREGDQAGRYRHLKM-IDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFL-DGDQGLLREFHAIVVDVWQTGDVPQQWKDATIK 565
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE) HSP 1 Score: 275 bits (704), Expect = 6.750e-76 Identity = 188/486 (38.68%), Postives = 262/486 (53.91%), Query Frame = 1
Query: 115 TQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTG--RKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
T E + RLM + + G++ +TFVV Y T+T NT K FW L++ + V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A DN+L+L+NT+F PKG TF + K R+D+I+ RQ R+L RN SV + DSDHN++ +R P R A NR+ R +G R ID + D R ++ T L E A T ++ A E+ P G +A H E EA E A++ L G L+ KA K R + A +++ E Y +LE+ D G+Y HLK ++GK+ ++Q I+DEDGK+LR P R RW R+F LLNT S ++ + ++Q PT + L D P + E+++A+R ++N KA+GPD+LPAEL KL L D L FH I+V VW TG VPQ+WKDATIK
Sbjct: 304 TVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLERNASVKRVDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSEAQH-EISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL-DGDRGFLREFHAIVVDVWQTGNVPQQWKDATIK 783
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5JM98_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM98_9PHAE) HSP 1 Score: 258 bits (658), Expect = 3.580e-70 Identity = 184/486 (37.86%), Postives = 254/486 (52.26%), Query Frame = 1
Query: 115 TQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGTRPADRK-RIDYIITRQPHRKLVRNVSVHLQPYADSDHNIMSARIRLPGRFARNRKQRAPTG--RKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVMPGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLR---KACEKLREIIQ-AADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
T E + RLM + + G++ +TFV+ Y T+TV T K FW L++A+ V S D+L VL+DANARTG R G D K++GAYGRD + ++NG LL A D +L+L NT+F PKG TF + K R+D+I+ RQ R+ VRNVSV + DSDHN++ +RLP R A NR+ R +G R ID + D R +S+ T L E A T T++ A E G +A H E EA ++ L G + L+ KA K R I A + +LE Y KLE+ D G+Y HLK +DGK+LR P IR RW R+F LLNT S ++ + +++ PT + L D P + E+++A+R ++N KA+GPD+L AEL KL L D+ +L FH I+V VW TG+VPQ+WKDATIK
Sbjct: 128 TVECISTRLMKVQLQI-GRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRD--IMNNNGERLLGLAADTQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDFKDSDHNLVLTTVRLPPRVAPNRRARGNSGSSRIRIDLERLRKDKHLRVAFQNRASSRPPPTALRRPTGETAAELTATVMSAAAETARLARCARGQRGWYTSEAQH-EISEASKXXXAXQQQLRGASKNSAFEATLKAMLKAARKKRSIATWRALETFLEGYVRKLEKKCREVDQAGFYRHLKM----------------IDDGKVLRNPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMTNRKAVGPDDLQAELIKL-LLDADQGLLREFHAIVVDVWQTGDVPQQWKDATIK 592
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Match: A0A6H5L315_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L315_9PHAE) HSP 1 Score: 242 bits (617), Expect = 8.870e-68 Identity = 191/526 (36.31%), Postives = 271/526 (51.52%), Query Frame = 1
Query: 10 GYRVFCSGVD-GNSGRAGQHGVGLAVKESI---VRQATWTQELTNERLMSMTFNLAGKSNAITFVVAYDLTDTVSNTR----EQKAVFWADLESAVSRVPSSDYLFVLIDANARTGVRM-GDEDCKVIGAYGRDTRVSDSNGTSLLRFAGDNKLALVNTFFSAPKGCTPRTFNGT-RPADRKRIDYIITRQPHRKLVRNVSV---HLQPYADSDHNIMSARIRLPGRFARNRKQR--APTGRKSIDRRAITSDTDRRERLIQLVASQLTQTELGGTVSENVALFTETLLRPAEEVM--PGQIRQSRVSGLLEDKAFHAEFEEAWTEREKARKALHGTFAGGSAFCPLRKACEKLREIIQAADDRYLEVYACKLEEFIVAEDVRGWYGHLKEGWKLQGKKIGSAQYIRDEDGKLLRKPEEIRARWRRYFTSLLNTTSAVLNRTIIEGLRQSPTALSLGDPPVVSEMKKALRSISNGKAMGPDELPAELHKLALFDSSHKILLAFHGIIVTVWMTGEVPQEWKDATIK 1536
GY + SG G + G GVG+A+KE++ V + T E + RLM + + G++ +TFVV Y T+TV T K FW L++A+ V S +L VL+DANARTG R G D K++G T VS NG LL A DN+L+L NT+F PKG TF + + ++ R+D+I+ RQ R+ VRNVSV DSDHN++ +RLP R A NR+ R + + R ID + D R + + T L E A T T A+ P ++R+SR R + A A + L+ A +K A + + E Y +LE+ D G+Y HLK +GK+ ++Q I+DE+G++LR P IR RW R+F LLNT S +N + +++ PT + D P + E+++A+R I+N KA+GPD+LPAEL KL L D +L FH I+V VW TG V Q+WKDATIK
Sbjct: 59 GYVIIWSGARAGTKDKRGVRGVGIAIKEAMWESVGEDGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRHHLVVLMDANARTGRRRDGCCDAKIMGTR---TGVSX-NGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSIKGKEKYRLDFILMRQTDRRFVRNVSVKRVERVDLKDSDHNLVLTTVRLPPRVAPNRRVRGNSRSSRIRIDLERLRKDKHLRVAFQNRASIRPPPTALRRPTGETAAELTATAGTRAKRSTRSPKRVRRSR--------------------RPSSNCAGPQRTAPTTLKAMLKAARQKRSIARWRALETFFEGYVRQLEKKSRDGDQAGFYKHLKM-IDFEGKRSFTSQNIKDENGEVLRDPTFIRQRWARWFHKLLNTKSPTINLHAADKIKRWPTCVPHHDIPSLLEVEEAVREIANRKAVGPDDLPAELIKLFL-DGDQGLLREFHAIVVDVWQTGGVTQQWKDATIK 557 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6626.17625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6626.17625.1 >prot_F-serratus_M_contig6626.17625.1 ID=prot_F-serratus_M_contig6626.17625.1|Name=mRNA_F-serratus_M_contig6626.17625.1|organism=Fucus serratus male|type=polypeptide|length=469bp MSMTFNLAGKSNAITFVVAYDLTDTVSNTREQKAVFWADLESAVSRVPSSback to top mRNA from alignment at F-serratus_M_contig6626:11223..13242+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6626.17625.1 ID=mRNA_F-serratus_M_contig6626.17625.1|Name=mRNA_F-serratus_M_contig6626.17625.1|organism=Fucus serratus male|type=mRNA|length=2020bp|location=Sequence derived from alignment at F-serratus_M_contig6626:11223..13242+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6626:11223..13242+ >mRNA_F-serratus_M_contig6626.17625.1 ID=mRNA_F-serratus_M_contig6626.17625.1|Name=mRNA_F-serratus_M_contig6626.17625.1|organism=Fucus serratus male|type=CDS|length=2814bp|location=Sequence derived from alignment at F-serratus_M_contig6626:11223..13242+ (Fucus serratus male)back to top |