mRNA_F-serratus_M_contig6624.17623.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 610 bits (1574), Expect = 5.130e-212 Identity = 298/454 (65.64%), Postives = 349/454 (76.87%), Query Frame = 1
Query: 103 EGSGCGTMTDLYNSRVESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAP-EQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCLNIVLEDDGSDIPDSSFTSDSNGLPDSIC 1461
EG GC T+TDLYN R+ESDG + KGPI+ LD+ N L P + KWLLTAEL++ GAVFYC+G+ + GDCDELRIQSTG DFHEVR HGGS+YFEST+VTSWDTPNK PQ TYVGGRSFLNCVSE + E C GQ +N+ GECRMDIINSE+GYLGYFDSESYGLTWKVRGFC D SNP+VFDTTNVYG+++GSDIHH YYG Y+YGHQGGVW +N+MHDN QYGFDPHDDSDYLT IIASKRCNNV+IY+NEVYDGG AAGIFLHRSSD A V++N VHDMQDAG+A+LES +A+IY N F+ VK+GIR+SLG N+VH+N F+ S GL+TY GSD P + +DGRP +N FENN+ILN +GVKIKE D+TVI+ N FTGT EL F DAQ T W N + C+ + DDG DI S+F + GLP C
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCIKNIHSDDGIDIELSTFDRRTAGLPTLEC 523
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 593 bits (1530), Expect = 3.030e-206 Identity = 287/463 (61.99%), Postives = 353/463 (76.24%), Query Frame = 1
Query: 103 EGSGCGTMTDLYNSR-VESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVR---------GFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCLNIVLEDDGSDIPDSSFTSDSNGLPDSIC 1461
E GC T+TDLYN R E+DG + KGP+Y+LD + APT+ T KWLL AELYV GA+FYC G++ GDCDELRIQSTG DD++EVRGHGGS+YF T+VTSWDTPNK+PQETY GGRSFLNCVSE + ETC+G KND GECRMDIINSEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDI SDIHHMYYG Y+YGHQGGVWT+N+MHDN QY +A N+VY N NHGIIASKRCNNV+IYDN+V DGG A GIFLHRSSD+A+VY N + +M DAGIA+LESF+A+I++N V++GIR+SLG G N V+DN F+ CS +GL+TYMGSD P+ ++GRP+ N F NNK+ N+A GVK K +DN V++ N FTGT+EL F+DAQAT+W N + C++ + DDG+ +P S+F+S S+G+P C
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPD-VSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPPSTFSS-SSGVPSEEC 465
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 595 bits (1533), Expect = 1.230e-200 Identity = 301/473 (63.64%), Postives = 348/473 (73.57%), Query Frame = 1
Query: 13 VMTIPDTCTDS--LPTIRYAESSGWPAAFVNMEGSGCGTMTDLYNSR-VESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCLNIVLEDDGSDIPDSS 1422
+M I +C D P+ RYA SSG A + EG GC TMTDLYN R E+DG + KGP+Y+LD+D P+ T WLL AELY+ G VFYCKGT GDC++LRIQSTGSDDFHEVRGHGGSLYFE T+VTSWDTPNKEPQETY GRSFLNCVSE + + CEG KN+ GECRMDIINSE+ YLGYFDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ GSDIHH+YYG Y+YGHQGGVWT+NKMHDN QYGFDPHDDSDYLTIA NEVY NVNHGIIASKRCNNV+I++NEV DGG AAGIFLHRSSD A V++N + +MQDAGIA+LESFDA+IY N KYGIR+SLG GNN V+ N+F S+YGL+TY GSD P+ +DGRP N N + + GVKIKE D+ NTF F ++ T W ND+ G C+ EDD D S
Sbjct: 414 LMEISSSCGDDEDRPSFRYAASSG-VAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPD-VSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDI-GDGCIE---EDDEFDAASGS 879
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 528 bits (1361), Expect = 6.310e-181 Identity = 259/450 (57.56%), Postives = 321/450 (71.33%), Query Frame = 1
Query: 103 EGSGCGTMTDLYNSRVESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSE-FESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCLNIVLEDDGSDIPDSSFTSDSNGLP 1449
+G GC T++DLY + + KGP+++LD ++ +D T TGKWLLTA+L+V GA YC+G V G+C ELRI+ST DF E+RGHGG+LYFE T+VTSWD ++PQETY GRSF+ CVSE ++TC N+ GECRMDII+SEMGYLGY SE+YG+TWKVRGFC D SNP+VFD NVYGD+ GSDIHHMYYGMY++GHQGGVWT+N MHDN QYGFDPHDDSDYL IA N+VY NVNHGIIASKRCNNV+IYDNEVYDGG AAGIFLHRS D ++VY N + +M DAGIA+LE+ +I++N ++GIR+ LG NN VHDN F G+FTY+GSD P GRP +N F NN I T GVKIKE+DN I+ N F+GT E+ F++A W N + + CL DI ++S + S+GLP
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCA---INNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEP-WVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCL--------EDIDNNSTFTGSSGLP 444
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 3.360e-167 Identity = 239/356 (67.13%), Postives = 273/356 (76.69%), Query Frame = 1
Query: 124 MTDLYNSR-VESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWK--------VRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMG 1164
MTDLYN R E DG + KGP+Y+LD+D P+ T WLL AELY+ G VFYCKGT GDC++LRIQSTGSDDFHEVRGHGGSLYFE T+VTSWDTPNKEPQETY GGRSFLNCVSE + + CEG KN+ GECRMDIINSE+ YLGYFDSESYG+TWK VRGFC D SNPEVFD TNVYGD++GSDIHH+YYG Y+YGHQGGVWT+NKMHDN QYGFDPHDDSDYLT IIASKRCNNV+I++NEV DGG A GIFLHRSSD A V++N + +MQDAGIA+LE+FDA+IY NT KYGIR+SLG GNN V+ N+F S+ L +G
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQCKLRQRLG 343
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 488 bits (1256), Expect = 2.950e-166 Identity = 245/425 (57.65%), Postives = 292/425 (68.71%), Query Frame = 1
Query: 187 ILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCLNIVLEDDGSDIPDSSFTSDSNGLPDSIC 1461
+LD+ N +PT+ T KWLL +ELYV +GA+FYC G++ GDCDELRIQSTG DD++EVRGHGGS+YF T+VTSWDTPNK+PQETY GGRSFLNCVSE + ETC+G+ KND GECRMDIINSEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDI S+IHHMYYGMY+YGHQGGVWT+N+MHDN QYGFDPHDDSDYLTIA ASKRCNNV+IY+NEV DGG +A GIFLHRSSD+A+VY G DAP+ ++GRP+ N F NNKI NTA GVKIK +DN VIS N FTGT+EL F DAQAT+W DN + C++ V DDG+ +P S+F+S S+G+P C
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPD-VSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPPSTFSS-SSGVPSEEC 368
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 472 bits (1214), Expect = 4.620e-156 Identity = 249/470 (52.98%), Postives = 322/470 (68.51%), Query Frame = 1
Query: 1 SPTPVMTIPDTCTDSLPTIRYAESSGWPAAFVNMEGSGCGTMTDLYNSRVESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESDET--CEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFC-VDKS-----NPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPE-QTADGRPDENNFENNKILNTAE--GVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCL 1377
+PTP T T DS T+R+ + + EG GCGT+T +Y ++ E DG P+Y+LDE+N D+ TG WLL L V +G+ GT GD D LR+ ST SDDF EVRG+GG+L+F+ST VTSWDT N + +E GRSF+NCV++F+ C+G+ ++GECRMDII+S MG +G+FD+ESYGLTWKVRG C +D N E+F+ NVYGDI+ S+I+ MYYG Y+YGHQGGVW N M DN QYGFDPHDDSD LTI+ N VYGN NHGIIASKRCNNV+I++NEVYDGGE A GIFLHRSSD A+V++N V++MQDAG+A++ES+DA IY+N+FT+ +YGIR+SLG G N + +N F ++YGL+TYMGSD P+ ++GRP +N F+ N I + GV IKE D+ V N FTG F D+ T+W DN G CL
Sbjct: 169 TPTPSAT---TSCDSAATVRFTDDIAY------FEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENN--DVVGGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN--TGGGCL 618
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 453 bits (1166), Expect = 3.640e-146 Identity = 232/435 (53.33%), Postives = 297/435 (68.28%), Query Frame = 1
Query: 100 MEGSGCGTMTDLYNSRVESDGWTPKGPIYILDE-DNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEFESD--ETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTAD--GRPDENNFENNKILNTAEG-VKIKEADNTVISGNTF---TGTQELTFHDAQATSWFDNDVQGSPCL 1377
+ G GC T+TD+Y ++ G GP+++LD DN + +PT Y WLL +++V EG++ G D GD LRIQSTGS D++E+RGHGGSL F T VTSWDT K+ Y RSF+ CVSE +D +TC+G N GECRMDII SEMG +GY +ESYG++WKVRG+C + NPEVF+ T V GDI+ SDI+ MYYG Y++GH GG+WT NKMHDNAQYGFDPHDDSD L IA N V+GN NHGIIASKRCNNV+I+ N VYDGGE A GIFLHRSSD +V+ N V+DM+DAG+AI+ES A I++NTFT+VKYGIR+S+G N V +N+F C +YG++TY G+D PE + D G +N F NT EG VKI++A+ V + N F + +E F D + W +N V CL
Sbjct: 402 IRGGGCATLTDIYTAQ---GGHNDDGPLFVLDSNDNVVGGSPTGY---WLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFH----ANTVEGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPDDICL 826
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 6.060e-142 Identity = 230/436 (52.75%), Postives = 282/436 (64.68%), Query Frame = 1
Query: 1 SPTPVMTIPDTCTDSLPTIRYAESSG--WPAAFVNMEGSGCGTMTDLYNSRVESDGWTPKGPIYILDEDNNIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEF--ESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTF 1296
SP ++ PD +D +IRYA ++ + + GC T+ ++ SR K P+Y +D D+ D++ T TG WLLT ELYV +G GTD GD DELR+ ST S+ + +R HGGSL F T V SWDT P E GRS+++ VSE + DETCEG KN GE RMDI NSE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ SDIHH+ +G+YTYGHQ G W NKMHDN+ YGFDPHDDSD+LTI NEVY N HGIIASKRCN V I NEVY G E +AGIFLHRSSD A V N VHD DAG+A+LESF+A++ ENTF + KYG+R+S+G +N +N SKY +TY+GSD P+ + GR N F N E +KIKEAD T N F
Sbjct: 33 SPNDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSG-DVSETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF 459
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 430 bits (1105), Expect = 2.120e-141 Identity = 230/456 (50.44%), Postives = 290/456 (63.60%), Query Frame = 1
Query: 112 GCGTMTDLYNSRVESDGWTPKGPIYILDEDN-NIDLAPTAYTGKWLLTAELYVREGAVFYCKGTDVDGDCDELRIQSTGSDDFHEVRGHGGSLYFESTLVTSWDTPNKEPQETYVGGRSFLNCVSEF--ESDETCEGQPKNDFGECRMDIINSEMGYLGYFDSESYGLTWKVRGFCVDKSNPEVFDTTNVYGDIMGSDIHHMYYGMYTYGHQGGVWTDNKMHDNAQYGFDPHDDSDYLTIARNEVYGNVNHGIIASKRCNNVEIYDNEVYDGGEQAAGIFLHRSSDSAKVYNNNVHDMQDAGIAILESFDAEIYENTFTDVKYGIRISLGGGNNYVHDNTFDTCSKYGLFTYMGSDAPEQTADGRPDENNFENNKILNTAEGVKIKEADNTVISGNTFTGTQELTFHDAQATSWFDNDVQGSPCLNIVLEDDGSDIP---DSSFTSDSNGLPDSIC 1461
GC T+ ++ SR KGP+Y +D D+ N+ T+ TG WLLT ELYV +G G++ GD DELR+ ST ++ F +R HGGSL F ST V SWDT P E GRS+++ +SE + DETCEG KN GE RMDI +SE+GYLGY+DSESYGLTWKVRGFC DKSNPEVFD NVYG++ SDIHHM +G+YTYGHQ G W NKMHDN+ YGFDPHDDSD+LTI NEVY N HGIIASKRCN V I NEVY G E +AGIFLHRSSD A V N VHD DAG+A+LESF+A++ ENTF + KYG+R S+G +N +NT ++Y ++Y+G+D P+ + GR N F N E +KIKEAD T N F E+ D FDN + N L+D ++ D+ F +++ + +C
Sbjct: 68 GCVTLGQIWESRAG------KGPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF----EVGDADGLVVR-FDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6624.17623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6624.17623.1 >prot_F-serratus_M_contig6624.17623.1 ID=prot_F-serratus_M_contig6624.17623.1|Name=mRNA_F-serratus_M_contig6624.17623.1|organism=Fucus serratus male|type=polypeptide|length=485bp MTIPDTCTDSLPTIRYAESSGWPAAFVNMEGSGCGTMTDLYNSRVESDGWback to top mRNA from alignment at F-serratus_M_contig6624:24003..27011+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6624.17623.1 ID=mRNA_F-serratus_M_contig6624.17623.1|Name=mRNA_F-serratus_M_contig6624.17623.1|organism=Fucus serratus male|type=mRNA|length=3009bp|location=Sequence derived from alignment at F-serratus_M_contig6624:24003..27011+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6624:24003..27011+ >mRNA_F-serratus_M_contig6624.17623.1 ID=mRNA_F-serratus_M_contig6624.17623.1|Name=mRNA_F-serratus_M_contig6624.17623.1|organism=Fucus serratus male|type=CDS|length=2910bp|location=Sequence derived from alignment at F-serratus_M_contig6624:24003..27011+ (Fucus serratus male)back to top |