mRNA_F-serratus_M_contig662.17619.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: D7G400_ECTSI (CCT-eta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G400_ECTSI) HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0 Identity = 543/581 (93.46%), Postives = 563/581 (96.90%), Query Frame = 1
Query: 175 MSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAPSQGVGLGRGGAPISAGXXXXXXXXXXXXXXRGRRPGVKMMKGRGGA 1917
MSYMN+PGIILL+EGTD+SQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDG+ VTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVI RGLRKA EVAV RLDAVSV P DD QA++VL++CAGTALNSKLISSQK+LFAPMVVEAVSNLDQQLLDLSL+GVKKVGGGSVTDSFLV GVAFKKTFSYAGFEQQPKSF+NP VLLLNVELELKSEKESAEVRISDP+MYQEIVDAEW+IIYDKLEKCVASGAKIILSKLP+GDLATQFFADRNLFCAGRVAQDDM RVAKATGGKVQTSIHGIT DVVGHCE+FEE QLGNERWNLFTGCP+ARTATI+LRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMS+YAKALEIIPRQLADNAGFDATDLLNRLRQKHAR GDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSE+ GAPSQGVGLGRGG PISAG XXXXXXXXXXX RG+RPGVKMMKGRGGA
Sbjct: 1 MSYMNQPGIILLREGTDSSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGQKVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVICRGLRKACEVAVGRLDAVSVKPTDDAQAKDVLIRCAGTALNSKLISSQKDLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITADVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEKQGAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 580
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A836CEV1_9STRA (T-complex protein 1 subunit eta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV1_9STRA) HSP 1 Score: 864 bits (2232), Expect = 2.110e-306 Identity = 439/582 (75.43%), Postives = 503/582 (86.43%), Query Frame = 1
Query: 175 MSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAPSQGVGLGRGGAPISAGXXXXXXXXXXXXXXRGRRP-GVKMMKGRGGA 1917
MS+M +PGIILL+EGTD SQGKAQL+SNINACQAV+D VR+TLGPRGMDKLIFDGR VTISNDGATIMKLLDIAHPAAK LVD+S+SQDAEVGDGTT+VVLL+GE+LKHVKGF+EDG++PQVI RGLR+A +VA+ARL+A+SV DD AR VL KCAGTALNSKLI+SQ+ LFAPM+VEAVS LD +L D+ +VG+KKV GGSVTDSFLV GVAFKKTFSYAGFEQQPK FENP +LLL+VELELKSEKE+AEVRISDP+ YQ IVDAEWSIIY+KL+ CVA+GA+IILSKLPIGDLATQ+FADR LFCAGRV +DM R+++ATGG+VQ++ GI V+G CEKFEE QLG ER+NLFTGCPKARTATI+LRGGSEQF+EES RS+HD+LM+VKR LK EVVAGGGAIEMELSKALR+ S+ I GK+QL+M A AKALEI+PRQL++NAG D+TD+LNRLR HA+ GD G+W GV VD E VCDT GVWEPTINKRN+LRSA EAACLILSIDETV+NPQSEQPGAPSQGVGLGRGG PISAG RG+ P GV+ MKGR GA
Sbjct: 1 MSHMLQPGIILLREGTDQSQGKAQLISNINACQAVVDAVRTTLGPRGMDKLIFDGRKVTISNDGATIMKLLDIAHPAAKVLVDVSVSQDAEVGDGTTTVVLLSGEVLKHVKGFIEDGVNPQVIIRGLRRAGDVAIARLNALSVKATDDASARAVLEKCAGTALNSKLIASQRGLFAPMIVEAVSLLDARLADVKMVGIKKVPGGSVTDSFLVRGVAFKKTFSYAGFEQQPKHFENPKILLLSVELELKSEKENAEVRISDPDAYQAIVDAEWSIIYEKLDACVAAGAQIILSKLPIGDLATQYFADRQLFCAGRVEPEDMERISRATGGRVQSTTSGIEASVLGTCEKFEEVQLGEERFNLFTGCPKARTATIVLRGGSEQFLEESQRSMHDALMVVKRSLKACEVVAGGGAIEMELSKALREASRAISGKEQLVMGAVAKALEIVPRQLSENAGLDSTDVLNRLRHAHAQPGDGGRWIGVSVDEEDVCDTMAKGVWEPTINKRNALRSAIEAACLILSIDETVRNPQSEQPGAPSQGVGLGRGGQPISAGMGGMGMAGMMGAG-RGKLPRGVRAMKGRAGA 581
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A7R9UFR0_9STRA (CCT-eta n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR0_9STRA) HSP 1 Score: 810 bits (2092), Expect = 3.780e-285 Identity = 408/584 (69.86%), Postives = 489/584 (83.73%), Query Frame = 1
Query: 175 MSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAP-SQGVGLGRGGAPISA--GXXXXXXXXXXXXXXRGRRPGVKMMKGRGGA 1917
MS M +PGIILL+EGTDTSQGKAQ++SNINAC AV +T+++TLGPRGMDKLIFDGR VTISNDGATIM+LLD+ HPAAKTLVDISMSQDAEVGDGTTSVVL+A IL +K FVEDGLHPQ+I RG+RKAA +AV R+ ++VS ++AR++L+ CAGTALNSKLIS+ K++FAPMVV+AVS LD QLLDL LVG+KKV GGSV SFLV GVAFKKTFSYAGFEQQPK F +PD+LLLNVELELKSEKE+AE+RI+DP+ YQ IVDAEW IIYDKLE CVASGAKIILSKLPIGDLATQ+FADR+LFCAGRV +DM RVAKATGG VQ + H I +GHC+ FEERQ+G+ER+NLFTGCP++RTATI+LRGGSEQF++E+HRSIHD+L IVKR +++ EVVAGGGAIEME+SK +R+ ++ I+GK+QLIM++ A+ALE+IPRQLADNAGFDAT++LN LR KHA+D + G+W+GV+VD EG+ DTF+S VWEP NK NS +A+EAACLILSIDETV+NP++EQPGA + GVGLG GG + G RG GV+ KGRGGA
Sbjct: 1 MSMMMQPGIILLREGTDTSQGKAQIISNINACAAVAETIKTTLGPRGMDKLIFDGRKVTISNDGATIMRLLDVVHPAAKTLVDISMSQDAEVGDGTTSVVLIAASILDEMKSFVEDGLHPQIIIRGIRKAANLAVQRVKDLAVSMRGGDEARQLLVTCAGTALNSKLISNHKDMFAPMVVDAVSMLDPQLLDLDLVGIKKVSGGSVRQSFLVEGVAFKKTFSYAGFEQQPKKFSDPDILLLNVELELKSEKENAEIRITDPDQYQSIVDAEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDLFCAGRVTNEDMMRVAKATGGVVQCTCHDIQTSALGHCQHFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSIHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREEARKIEGKEQLIMNSMARALEVIPRQLADNAGFDATEVLNNLRMKHAKD-EKGRWYGVNVDVEGITDTFQSNVWEPAPNKVNSFAAASEAACLILSIDETVRNPRTEQPGAADANGVGLGPGGGGMGGRRGKAPGGMPPMGGGGRRGMPKGVRAFKGRGGA 583
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A7S1U8Z7_9STRA (CCT-eta n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Z7_9STRA) HSP 1 Score: 803 bits (2074), Expect = 7.500e-282 Identity = 408/599 (68.11%), Postives = 496/599 (82.80%), Query Frame = 1
Query: 148 LRQTEGQGAMSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAP-SQGVGLGRG--------GAPISAGXXXXXXXXXXXXXXRGRRPGVKMMKGRGGA 1917
L + + MS+M +PGIILL+EGTDTSQGKAQ+VSNINAC AV +T+++TLGPRGMDKLIFDGR VTISNDGATIM+LLD+ HPAAKTLVDISMSQDAEVGDGTTSVVL+A IL +K FV+DGLHPQ+I RG+R+AA +AV R+ + V+ +AR++L CAGTALNSKLIS ++LFAPMVV+AVS LD +LLDL+LVG+KKV GGSV SFLV GVAFKKTFSYAGFEQQPKSF NP++LLLNVELELK+EKE+AEVRI+DP+ YQ IVD EW IIYDKLE CVASGAKIILSKLPIGDLATQ+FADR++FCAGRVA +D+ RV KATG +Q + H I +G C++FEERQ+G+ER+NLFTGCP++RTATI+LRGGSEQF++E+HRS+HD+L IVKR +++ EVVAGGGAIEME+SK +R+ +++I+GK+QLIM+ A+ALE+IPRQL+DNAGFDAT++LN+LR KHA+ G AGKW+GVDVD EG+ DTFESGVWEP NK NS +A+EAAC+ILSIDETV+NP+SEQPGA + GVGLG G G P+SA XXX RG GV+ +GRGGA
Sbjct: 22 LSRPNTRAKMSHMMQPGIILLREGTDTSQGKAQIVSNINACAAVAETIKTTLGPRGMDKLIFDGRKVTISNDGATIMRLLDVVHPAAKTLVDISMSQDAEVGDGTTSVVLIAASILNEMKHFVDDGLHPQIIIRGIRRAANLAVDRVRELGVAMHSTEEARKLLETCAGTALNSKLISHHQDLFAPMVVDAVSMLDPELLDLNLVGIKKVPGGSVRQSFLVEGVAFKKTFSYAGFEQQPKSFSNPEILLLNVELELKAEKENAEVRITDPDQYQSIVDTEWRIIYDKLEACVASGAKIILSKLPIGDLATQYFADRDIFCAGRVANEDVLRVQKATGAVMQCTCHDINKSDLGRCDRFEERQVGDERYNLFTGCPRSRTATIVLRGGSEQFIDETHRSVHDALCIVKRAMRSGEVVAGGGAIEMEVSKFVREQARSIEGKEQLIMNGMARALEVIPRQLSDNAGFDATEVLNQLRMKHAK-GTAGKWYGVDVDVEGITDTFESGVWEPAANKMNSFAAASEAACVILSIDETVRNPRSEQPGAADANGVGLGAGAGGRGGRRGKPVSAAMGGGGMAGMMXXXRRGGPRGVRAFRGRGGA 619
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A7S2V255_9STRA (T-complex protein 1 subunit eta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V255_9STRA) HSP 1 Score: 781 bits (2016), Expect = 1.140e-273 Identity = 405/587 (68.99%), Postives = 479/587 (81.60%), Query Frame = 1
Query: 175 MSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPD-VVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAP-SQGVGLGRGGAPISAGXXXXXXXXXXXXXX-RGRRP---GVKMMKGRGGA 1917
MSYM +PGIILL+EGTDTSQGKAQLVSNINACQA+ D +R+TLGPRGMDKL+FDGR VT+SNDGATIMKLLD+ HPAAK LVDIS+SQDAEVGDGTTSVVLLA +L VK +ED +HPQV+ RG+R AA A L+ +SVS + A ++L+KCAGTALNSKLI++QK LFAPMVVE + LD QLLDLSLVG+KKV GGSVTDSFLV GVAF+KTFSYAGFEQQPKSF +P +LLLNVELELKSEKE+AEVRI+DP+ YQ IVDAEW+IIY+KLE CV SGA+IILS+LPIGDLATQ+FADR LFCAGRV Q+DM RVAKATG +QTS+ G++ + V G C FEE Q+G +R N+F CP ARTAT+ILRGG+EQF+EE+ RSIHD+LMIVKR L VV GGGA+E ELSK L+ + TI+GKQQL+ +A+AKALE++P QLA NAGFD+TDLLN+LRQ HA+ AGKW GVDV+TEG+ DTFE+G+WEPTINKRN+L +A EAACL+LS+DETV+NP+S+ PGAP SQGVGL AP+SAG RGRR GVK +GRGGA
Sbjct: 1 MSYMMKPGIILLREGTDTSQGKAQLVSNINACQAIADAIRTTLGPRGMDKLVFDGRNVTVSNDGATIMKLLDVVHPAAKMLVDISLSQDAEVGDGTTSVVLLAASLLSQVKTHIEDNMHPQVVVRGVRAAALEAQKLLEGMSVS-FEGADADQMLLKCAGTALNSKLIAAQKGLFAPMVVECIKYLDPQLLDLSLVGIKKVQGGSVTDSFLVQGVAFQKTFSYAGFEQQPKSFTDPKILLLNVELELKSEKENAEVRITDPDQYQSIVDAEWTIIYEKLENCVESGAQIILSRLPIGDLATQYFADRGLFCAGRVPQEDMERVAKATGAVMQTSVFGLSEEGVTGTCGIFEEVQVGGDRMNIFKDCPSARTATMILRGGAEQFLEETERSIHDALMIVKRSLAVGSVVGGGGAVECELSKLLKQKANTIQGKQQLVFTAFAKALEVVPYQLASNAGFDSTDLLNKLRQAHAKSS-AGKWMGVDVETEGITDTFEAGIWEPTINKRNALMAAAEAACLVLSVDETVRNPRSQAPGAPDSQGVGL----APVSAGMGGQGMAGMVSRGRGRGRRGMPRGVKAFRGRGGA 581
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A485KV81_9STRA (CCT-eta n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KV81_9STRA) HSP 1 Score: 773 bits (1995), Expect = 3.430e-270 Identity = 399/589 (67.74%), Postives = 480/589 (81.49%), Query Frame = 1
Query: 157 TEGQGAMSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLD--AVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAPSQGVGLGRGGAPISAGXXXXXXXXXXXXXXRGRRPGVKMMKGRGGA 1917
TEG ++P IILLKEGTDTSQGK+QL+SNINACQA+M++VR+TLGPRGMDKLI G TISNDGATIM LLDI HPAAKTLVDIS+SQDAEVGDGTTSVVLL GE+L+ K FVE+ +HPQ I + RKA +AV ++ V V+ D R +L + AGTALNSKLISSQK+ F+PMVV+A+ +LD + D+S+VGVKKV GGSVTDSFLV GVAFKKTFSYAGFEQ PK F+NP +LLLNVELELKSEKE+AEVRI DP YQ IVDAEW+IIYDKLEKCV SGA+IILSKLPIGDLATQ+FADR LFCAGRVAQDDM R +ATGG +QTS+ +T ++G C KFEE+Q GNER+NLFT CPK+++ TI+LRGG+EQF+EE+HRS+HD+LM+VKR + VVAGGGAIEME+S+ LR++S+T++GK QL+++AYAKA EIIPRQL+DNAG D+TD+LNRLRQKH +D + GKWFGVD++T G+CDTFES VWEP NK NS+ +ATEAACLILS+DETV+NP+SEQP G+G G GGAP+SA XXXXXXX G GV+ +G+GGA
Sbjct: 16 TEGAPQPMSEDQPQIILLKEGTDTSQGKSQLISNINACQAIMESVRTTLGPRGMDKLIHKGSKTTISNDGATIMGLLDIVHPAAKTLVDISLSQDAEVGDGTTSVVLLGGELLRQAKPFVEENMHPQTIIKSYRKACTLAVQKIRDIMVHVAETDSVAYRNMLERVAGTALNSKLISSQKKFFSPMVVDAILSLDTDM-DISMVGVKKVPGGSVTDSFLVKGVAFKKTFSYAGFEQMPKYFKNPKILLLNVELELKSEKENAEVRIDDPSQYQSIVDAEWNIIYDKLEKCVKSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTMRATGGAIQTSVQDMTDKILGTCGKFEEQQCGNERYNLFTDCPKSKSTTIVLRGGAEQFIEEAHRSVHDALMVVKRTVATSTVVAGGGAIEMEISRHLREYSRTVEGKAQLLINAYAKAFEIIPRQLSDNAGHDSTDILNRLRQKHFKDPETGKWFGVDINTGGICDTFESHVWEPAANKINSVAAATEAACLILSVDETVRNPKSEQP---QGGMGGGPGGAPMSAAMGGQGMKXXXXXXXGGLGKGVRAFRGKGGA 600
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A7S2CM60_9STRA (T-complex protein 1 subunit eta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CM60_9STRA) HSP 1 Score: 769 bits (1986), Expect = 3.070e-269 Identity = 389/544 (71.51%), Postives = 460/544 (84.56%), Query Frame = 1
Query: 163 GQGAMSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQAREVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLL-DLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAPSQGV 1791
G G M +PGIILL+EGTD SQGKAQL+SNINACQAV DTVR+TLGPRGMDKL+FDG+ VTISNDGATIMKLLDI HPAAKTLVDISMSQDAEVGDGTTSVVLLAGE+LK +K FVE+GLHPQ+I GLRKAA+VAVARL ++V + R++L AGTALNSKLIS+QK LF PM+V+AVS LD + DL +VG+KKV GG VT SFLV GVAFKK FSYAGFE K + NP +L+LNVELELKSEKE+AEVRI+DP YQ IVDAEW IIY+KL+KCV SGA+IILSKLPIGDLATQ+FADRNLFCAGRV D+ RVA+ATGG +Q++++ +TPD++G C +FEERQ+G ER+N+FT C A+TATI+LRGGSEQF+EESHRSIHD+LMIVKR L + VVAGGGAIEME+SK+LR+++KTI GKQQLI+SA+AKALE++PRQL +NAGFDAT +LN LRQ HA GD G+W GVD+DTEG+C+T ESGVWEP +NK NS +A EAAC+ILSIDETV+NPQSEQPG + G+
Sbjct: 3 GYGGM----QPGIILLREGTDQSQGKAQLISNINACQAVADTVRTTLGPRGMDKLVFDGQRVTISNDGATIMKLLDIVHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEVLKQIKPFVEEGLHPQIIMGGLRKAAQVAVARLKEIAVD-IGAAGNRDMLETFAGTALNSKLISNQKSLFCPMIVDAVSILDMEPAPDLDMVGIKKVPGGDVTQSFLVEGVAFKKAFSYAGFEMMQKQYTNPKILILNVELELKSEKENAEVRITDPGDYQSIVDAEWQIIYEKLDKCVDSGAQIILSKLPIGDLATQYFADRNLFCAGRVDASDLKRVAQATGGHMQSTVNDLTPDILGECGEFEERQVGEERYNVFTKCTNAKTATIVLRGGSEQFIEESHRSIHDALMIVKRGLMSARVVAGGGAIEMEVSKSLREYAKTIMGKQQLIISAFAKALEVVPRQLCENAGFDATTVLNELRQSHALAGDVGRWSGVDMDTEGICNTMESGVWEPAVNKINSYTAAAEAACVILSIDETVRNPQSEQPGGAAGGM 541
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A6H5JXK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK9_9PHAE) HSP 1 Score: 761 bits (1965), Expect = 1.600e-268 Identity = 401/426 (94.13%), Postives = 412/426 (96.71%), Query Frame = 1
Query: 640 MKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAPSQGVGLGRGGAPISAGXXXXXXXXXXXXXXRGRRPGVKMMKGRGGA 1917
M+CAGTALNSKLISSQK LFAPMVVEAVSNLDQQLLDLSL+GVKKVGGGSVTDSFLV GVAFKKTFSYAGFEQQPKSF+NP VLLLNVELELKSEKESAEVRISDP+MYQEIVDAEW+IIYDKLEKCVASGAKIILSKLP+GDLATQFFADRNLFCAGRVAQDDM RVAKATGGKVQTSIHGITPDVVGHCE+FEE QLGNERWNLFTGCP+ARTATI+LRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMS+YAKALEIIPRQLADNAGFDATDLLNRLRQKHAR GDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ GAPSQGVGLGRGG PISAG XXXXXXXXXXX RG+RPGVKMMKGRGGA
Sbjct: 1 MRCAGTALNSKLISSQKNLFAPMVVEAVSNLDQQLLDLSLIGVKKVGGGSVTDSFLVKGVAFKKTFSYAGFEQQPKSFDNPGVLLLNVELELKSEKESAEVRISDPDMYQEIVDAEWNIIYDKLEKCVASGAKIILSKLPVGDLATQFFADRNLFCAGRVAQDDMERVAKATGGKVQTSIHGITPDVVGHCERFEETQLGNERWNLFTGCPEARTATIVLRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSSYAKALEIIPRQLADNAGFDATDLLNRLRQKHARGGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQ----GAPSQGVGLGRGG-PISAGMGXXXXXXXXXXXGRGQRPGVKMMKGRGGA 421
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: A0A5D6XQ58_9STRA (CCT-eta n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQ58_9STRA) HSP 1 Score: 755 bits (1949), Expect = 1.360e-263 Identity = 395/582 (67.87%), Postives = 481/582 (82.65%), Query Frame = 1
Query: 184 MNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQA--REVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQP-GAPSQGVGLGRGGAPISAGXXXXXXXXXXXXXXRGRRP-GVKMMKGRGGA 1917
M +P IILLKEGTDTSQGKAQL+SNINACQAVM+ VR+TLGPRGMDKLI G TISNDGATIM LLD+ HPAAKTLVDIS+SQDAEVGDGTTSVVLL E L+ K F+E+ +HPQ+I + RKA ++AV ++ + V D + R++L + AGTALNSKLIS K F+PM+V+AV +LD+ D+++VGVKKV GGSVTDSFLVNGVAFKKTFSYAGFEQQ K+F +P +LLLNVELELKSEKE+AEVRI DP+ YQ IVDAEW+IIY+KLE CV SGA+IILSKLPIGDLATQ+FADR LFCAGRVAQDDM R +ATGG VQTS+H +TP V+G C +FEERQ+G ER+N+F C +A++ATI+LRGG+EQF+EE+HRS+HD+LM+VKR + + VVAGGGAIEME+S+ LR +++TI+GK QL+++AYAKA E+IPRQ+ADNAG D+TD+LNRLRQKH +D D GKWFGVD+++ G+CDT+E+ VWEP NK NS+ +ATEAACLILS+DETV+NP+SEQP G P QG GGAP+SA XXXXXXXXXXXX G GV+ +GRGGA
Sbjct: 2 MMQPQIILLKEGTDTSQGKAQLISNINACQAVMEAVRTTLGPRGMDKLIHAGNKTTISNDGATIMNLLDVVHPAAKTLVDISLSQDAEVGDGTTSVVLLGAEFLRQAKPFIEENMHPQLIMKSYRKAGQIAVQKVKEIQVRVADSDVVGRRQMLERVAGTALNSKLISRHKAFFSPMIVDAVLSLDEDQ-DITMVGVKKVQGGSVTDSFLVNGVAFKKTFSYAGFEQQQKTFTSPKILLLNVELELKSEKENAEVRIEDPDQYQSIVDAEWNIIYEKLELCVQSGAQIILSKLPIGDLATQYFADRGLFCAGRVAQDDMERTQRATGGVVQTSVHDMTPSVLGTCGRFEERQVGGERFNIFMDCSQAKSATIVLRGGAEQFIEEAHRSVHDALMVVKRTVASAAVVAGGGAIEMEVSRHLRQYARTIEGKAQLLVNAYAKAFEVIPRQIADNAGHDSTDILNRLRQKHFKDPDEGKWFGVDINSGGICDTYEAHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQPQGGPGQG-----GGAPMSAAMGXXXXXXXXXXXXXGGLGRGVRAFRGRGGA 577
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Match: M4BHZ0_HYAAE (CCT-eta n=34 Tax=Oomycota TaxID=4762 RepID=M4BHZ0_HYAAE) HSP 1 Score: 745 bits (1924), Expect = 7.390e-260 Identity = 387/583 (66.38%), Postives = 477/583 (81.82%), Query Frame = 1
Query: 190 RPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKLIFDGRTVTISNDGATIMKLLDIAHPAAKTLVDISMSQDAEVGDGTTSVVLLAGEILKHVKGFVEDGLHPQVIARGLRKAAEVAVARLDAVSVSPVDDNQA--REVLMKCAGTALNSKLISSQKELFAPMVVEAVSNLDQQLLDLSLVGVKKVGGGSVTDSFLVNGVAFKKTFSYAGFEQQPKSFENPDVLLLNVELELKSEKESAEVRISDPEMYQEIVDAEWSIIYDKLEKCVASGAKIILSKLPIGDLATQFFADRNLFCAGRVAQDDMARVAKATGGKVQTSIHGITPDVVGHCEKFEERQLGNERWNLFTGCPKARTATIILRGGSEQFMEESHRSIHDSLMIVKRCLKNREVVAGGGAIEMELSKALRDHSKTIKGKQQLIMSAYAKALEIIPRQLADNAGFDATDLLNRLRQKHARDGDAGKWFGVDVDTEGVCDTFESGVWEPTINKRNSLRSATEAACLILSIDETVKNPQSEQPGAPSQGVGLGRGGAPISA-----GXXXXXXXXXXXXXXRGRRPGVKMMKGRGGA 1917
+P IILLKEGTDTSQGKAQL+SNINACQAVMD VR+TLGPRGMDKLI G TISNDGATIM LLD+ HPAAKTLVDIS+SQDAEVGDGTTSVVL+ E ++ K F+E+ +HPQ I + RKA ++AV ++ + + + ++ R++L + +GTALNSKLIS K+ F+PM+V+AV +LD+ L D+S+VG+KKV GGSVTDSFLV GVAFKKTFSYAGFEQQPK+F NP +LLLNVELELKSEKE+AEVR+ DP YQ IVDAEW+IIY+KL+ CV SGA+IILSKLP+GDLATQ+FADR LFCAGRVAQDDMAR +ATGG VQTS+H + P V+G C +FEERQ+GNER+N+F C +A+++TI+LRGG+EQF+EE+ RS+HD+LM+VKR + + VVAGGGAIEME+S LR +++TI+GK QL+++AYAKA EIIPRQ+A+NAG DATD+LNRLRQKH +D + GKWFGVD+ T G+CDT+ES VWEP NK NS+ +ATEAACLILS+DETV+NP+SEQP QG G GGAP+SA G XXXXXXXXX GR GV+ +G+GGA
Sbjct: 2 QPQIILLKEGTDTSQGKAQLISNINACQAVMDAVRTTLGPRGMDKLIHTGGKTTISNDGATIMNLLDVVHPAAKTLVDISLSQDAEVGDGTTSVVLMGAEFMRQAKPFIEENMHPQTIIKSFRKAGQLAVQKIKDIEIHIAESDEVGRRQMLERVSGTALNSKLISRHKQFFSPMIVDAVLSLDEGL-DISMVGIKKVPGGSVTDSFLVKGVAFKKTFSYAGFEQQPKTFVNPKILLLNVELELKSEKENAEVRLDDPSKYQSIVDAEWNIIYEKLDLCVKSGAQIILSKLPVGDLATQYFADRGLFCAGRVAQDDMARTQRATGGVVQTSVHDMNPSVLGSCGRFEERQVGNERYNIFMECAEAKSSTIVLRGGAEQFIEEAQRSVHDALMVVKRAVASSTVVAGGGAIEMEVSCHLRQYARTIEGKAQLLVNAYAKAFEIIPRQIAENAGHDATDILNRLRQKHFKDPENGKWFGVDITTGGICDTYESHVWEPAANKINSIAAATEAACLILSVDETVRNPKSEQP----QGGG---GGAPMSAAMGGQGMRGMMXXXXXXXXXMGR--GVRAFRGKGGA 574 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig662.17619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig662.17619.1 >prot_F-serratus_M_contig662.17619.1 ID=prot_F-serratus_M_contig662.17619.1|Name=mRNA_F-serratus_M_contig662.17619.1|organism=Fucus serratus male|type=polypeptide|length=582bp MSYMNRPGIILLKEGTDTSQGKAQLVSNINACQAVMDTVRSTLGPRGMDKback to top mRNA from alignment at F-serratus_M_contig662:332572..342226+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig662.17619.1 ID=mRNA_F-serratus_M_contig662.17619.1|Name=mRNA_F-serratus_M_contig662.17619.1|organism=Fucus serratus male|type=mRNA|length=9655bp|location=Sequence derived from alignment at F-serratus_M_contig662:332572..342226+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig662:332572..342226+ >mRNA_F-serratus_M_contig662.17619.1 ID=mRNA_F-serratus_M_contig662.17619.1|Name=mRNA_F-serratus_M_contig662.17619.1|organism=Fucus serratus male|type=CDS|length=3492bp|location=Sequence derived from alignment at F-serratus_M_contig662:332572..342226+ (Fucus serratus male)back to top |