mRNA_F-serratus_M_contig662.17609.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig662.17609.1
Unique NamemRNA_F-serratus_M_contig662.17609.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig662.17609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig662contigF-serratus_M_contig662:40862..47091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size171
Cds size171
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932030.5894244-CDS-F-serratus_M_contig662:40861..409461622932030.5894244-CDS-F-serratus_M_contig662:40861..40946Fucus serratus maleCDSF-serratus_M_contig662 40862..40946 -
1690964111.158575-CDS-F-serratus_M_contig662:40861..409461690964111.158575-CDS-F-serratus_M_contig662:40861..40946Fucus serratus maleCDSF-serratus_M_contig662 40862..40946 -
1622932030.6047902-CDS-F-serratus_M_contig662:47005..470911622932030.6047902-CDS-F-serratus_M_contig662:47005..47091Fucus serratus maleCDSF-serratus_M_contig662 47006..47091 -
1690964111.1768613-CDS-F-serratus_M_contig662:47005..470911690964111.1768613-CDS-F-serratus_M_contig662:47005..47091Fucus serratus maleCDSF-serratus_M_contig662 47006..47091 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig662.17609.1prot_F-serratus_M_contig662.17609.1Fucus serratus malepolypeptideF-serratus_M_contig662 40862..47091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig662.17609.1

>prot_F-serratus_M_contig662.17609.1 ID=prot_F-serratus_M_contig662.17609.1|Name=mRNA_F-serratus_M_contig662.17609.1|organism=Fucus serratus male|type=polypeptide|length=57bp
MVTTENYLHGPNQKWALDFSQTKHIAFDLNETRGVKRISSYTLQTEQVGV
HTTLKSS
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mRNA from alignment at F-serratus_M_contig662:40862..47091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig662.17609.1 ID=mRNA_F-serratus_M_contig662.17609.1|Name=mRNA_F-serratus_M_contig662.17609.1|organism=Fucus serratus male|type=mRNA|length=6230bp|location=Sequence derived from alignment at F-serratus_M_contig662:40862..47091- (Fucus serratus male)
ATGGTTACTACAGAGAATTATCTGCACGGCCCAAACCAGAAGTGGGCGTT
AGATTTCTCTCAAACTAAACATATTGCATTCGACTTGCAAACAGCGGCGA
AAGTTCAAACAACGGATTTTTGCGCGAATCAAGAGCAGTGACGTACTATT
GTAACTACTGCATAAAACCACGACCGCACGATAACAGTACCGAAACGACC
TCCCGTTACTATTCTATAGCCAAGATGAGATCCTCGCAGACCCACACAGA
GTACTTCCTATGGTCCCAGCGCCGGATTCATCAGTATCATAGTACAGTAC
CAAACACTCTTCCGTTATCTGTTTATGCCCAATCAAATGAAATCCTCGCA
GACCCAAAACGAAAACACTTCCTACGGTCCCAGCGTTGGATTCATCATTA
CAAATATCGGCCCACCGGTACTATCTTGGCCGGCCAATTTCTCGAAGATG
GGACGGTCTTCTGTCAGCGTGCCGTCCGTAAGCGTCTTCTACGCTGAACT
GGGAGAGGATGTTCTTGATCTTGCGCTCGAGGCTCGAAGTCTACCTGTCA
AAACAAATTATACTGTATGGGAAATTTTCGAATCCAGAAACAAAACCACG
CGCAAGACATTTTGCAATAATGGACACTGTCGTCAATCAGAACTGTCGTT
CGATCCTCAGTTTCTCGTCCATTTTGTAGTTGTCTGTAACTCGATCACAC
ACCTTCATCATGACACCCTTTTTCAAAAGGAAAGTCAGAAGGGAGATGAA
ATGCCGATGGGTGCTGCTCTCGTGAGCATACCCTTTTAAAACGGCTACCC
GCGGTATCAACTTGTCACCGAGTAGTCCGTGGGCGCTAAGTAACACGTAG
CCCACCCAAGCCCAAACCTCGGGCTTGAAGCGTCAGTTATCATCAGTAAG
CTGTACGCTGATGATGTCTTTCGTGGCCATAAACCACTAGTCCCAGGAAA
AGGGGAACTCAACCCATAGTCTAGTCTAGCTGGGGTCAAGAATTTTCAGC
TCCGCACGTTGTCGCTTACAAACGGAGAATGGTCTGTACATTTAGACAGG
ACCAAAATCAAGTGTTACTCGTAAAGACTAGATAGCCCTCACAATACTGT
ACGTAGTTTCATTTTTGGTTGGTTGCCACAATCTTCGTTTCATAGTAGAG
TAACTTGCCTGGCTTCCCAATACCTATTTCTTGGAATTTCGTGTCGTGTC
CATTTTTTGTGGTTACGGCAAAACGCTACGCCCCTTTTAATGACTTCTCG
ATCAGATGTCACCCTTGAGATGTTCGGCTAACATTCGTCTGGTGACATTG
TAGCTCTGACGCTAACCAACGATCAATAAGCCCGTAGACGATTTCGCTTA
GTTCTTTACCGTTGTCAGTTGCTGGAGTGGATCACTATTATCTTGTTGTT
GTTGTTGTTGTTTTCTTGTCTCAATCAACCCTCTGATTAATCACGCATAT
TTTCAGAGATGCGTTGCTCAAGCGTTTGCTGGTAGTATTTTCGCCCTAGG
TTAGAATTGTTCTTCTTGTGTACAGCAATAATGCGAGAATTCATCTCGGC
ATCTACCGTAAAATGATCTCCCCCTCTGGACTACGAACAAGAGGGCATCG
CTCCGAGCGTCCCCCGTTCCTATCACGTTCGAATACCTATGGCTTTTGTC
CGCTTCGACGCCCGGCACGCCCGTGATATTCCTTTTCTGCATTACGGCAA
CTTACGGCTCCAATACTGTGTTGACCGTATTGAATGGTTTCTCTGTGGTC
ACATTTGCAACCAACTGGAATGGTTTTTTTCTGTGGTCACATTCAGTGTA
GTAAATCATCAGGCGGATTTTACCCACGTTTTTGCAACCAAGCTCCTCCT
GGCTATATTTGTTCGTACGGTCGCAACAACGTGGACCATTAAACAGGATA
TATTTTTCAGAATCGAGACCGTAGCCTTTTCCAGCTTCGTCCTTACTTTT
TACCCTTGTATTGGCTACTTCTGGCCAACACTATTCTTCTTCCCCAATTC
GGGGTTGAGACATTACGATAGAGTCTTTCCAAGACTGTTGTATGTTGTCT
CTGTCATGGATACTAGCATCCACGGCAGCCCTAATGTGTCAGTTTTTTTT
TGTTTCAACACCGGTGTTTCATTATGGGGCGCCTTTCTTTCTCCTATCTC
CCTCAAGGTTGCCTGATGCATTGCTTGAGTGAAGCGTTTTAAATCGTCTG
GCACTTTATTGCCAGAAGAGCGCTCAAGGTTGTTTTTCGATTGATCAGAT
CATGCATACCTTGTCTATGCTCTGATGATGCGGCGATAATAGCGGTCCGC
CTATCTTTTTGCCTTTCAGCTATCCGCGATCCTCCCTCCCAACTTAGAGG
GTGGTCAATCCTACGTAAGCTTGAAGTTCGAATGTTGGTATTAGCTGTAT
CATCTCTCTTTTGTAGGCATGGTCGCGACGGAGACTATTGCTCCTCGCAT
GCCACTCGTGGAGTCGATTCTCACTCGTTTCATCTTGCCCCCGAGCCTGA
CCAATGACCAGGAAGCGATCTGAAAACAGACTTTGAAACTGGCTCCTTTG
CCTGATTATTATTTTTTTTTTTTTTGCCAGGGTCATCCCACATTCCAATG
TATGTCCTGCCCAAAAAGGATGTTTATTATTTAGGGATATGGATCAATGT
CCTCCTTACTTTTCACCCTTATGTTCTGTACTAGACTTGTTTCGGAATTC
AGTCTAGACCGATGTAACTTCAAGCGTGCCGTTAGTTCCTATAGACTGCA
CACTGAAATTTGCAGTACTTGTAGCTTGAGTAACGAGCGAACAGGGAGAG
CCTATACTTCCGCTGAACTTATTCACTCGTATTAGTCGCTTGTTGTACTT
TCGAGTCACGAATATTCTCCGTGTTTTTACTATGTCCTCGGCGCGGTTCA
TTTCATCCTGTCCTCTGACATGTTGTTTTCTCGTCGGTTTATCACACATT
ATTTCAAAAGTGTGCCGACATTGAAAAGGAGCAAATCTTTCGACGCATTG
ACTGCAGGCTAGTACAGTTTCTTTATCGCTATTCATTTGCATCGCTCTGT
TGTGTATCAGACATTATGTTTCCAGTTTCATCTCGTCTGAAGCAACGTAT
CATCACTCGATTTGAGTTTTTTCAGTGACGTTGTGATGTCGTTTCGTTTT
TTTTTCTCTTCCACACATATGGCAGCACCCAATGTATTCGTCATACGCTA
CGGGCTCGATTCATATGTGCCCCCTAGGGAGTGGGGTATGGCTCGCGTCT
TCGTTACGCGCTTTTGTCGTTTTGGTACCATCGGGAAGCTCCCTCATTCC
CTTACCCCTCGAGGTTAACTCGTGCAGAGCTCGAGTGGGTCATTTAACAC
CTGAGTCTGGATGCTCAGGCAAGCTCCCAAAAAAATTTGAGCTGATCAGG
CCTTCCCAATTTTGGTTTCGCTCCGGTTTCATCTTACCTTTTTTGAATAT
GGCTGGCGACATTGATCGGTCGTACTGCTTATCGCGTGCCATACGCCTTT
GATTACCGCCCATCGGGTCCGCTTTGCCGACTGCCTGCGATGTGCGTTTT
GCATTCGGAAATAGGAGTACTTCTAACTTCTCTATTCCTGTATCACTATC
TGTCCCATCCAAGGTTAATCTATTCAGAGCTTGGATTGAGCATTTCCGCG
ATGTTTCCTGGTCTAGCCTTTGCATAGAGCGTCTCAAAATCTCATCATTT
TGAGTTCGCCCAGGTGATAGTTCGTCGTCATCACCTTCTTACAGCTACCA
GTAGCTTGCAATTCATCGCATGCCACTGTCTTTTCTGTAATGCGCATTGC
GCCGGTCTCCACTTTTTCTATACGTTGTATACGAGTCGGAGATGTAGTTT
CGTCTGTTAATAGACATTTCTGCGAACATTCTTGTGAGAGATCAACCGCA
GTCACACCTGCCCGGTTGTCATGTGTTATTGTTCGACTTGTAATACCTTC
GATTGCTACTGGCGAGACAGAAGGTAACATCCCATCATCGGATTGTATGT
TTGTTCTAGATCACTAGAATTGGGAGTCTTCACAAAGTTCTTGGTTGTAA
CTGTTGTCACTGCCACTTCCAACCTATCACTGCTTTGACGACTTGTAGCA
TTTTCAGCGGAATTACTTTTCGGCGTGTGCTCGGAGTTTATTTTTGACCT
ATTAGGAGTTGTTCGCCCAACTGACTCTTTCTCAGGTTCGGCACGCAATT
CTCCGATATTGCTGTCCGTAAGACCGCTATTGTCTAGGAATGGCTTGGGG
CATATTCGCATGTTGCTGAACGTAGCGGGCTTGGTTTTGGGGTCAGAACG
TCGCGCTAGCAATGGCGGCTCGCCATCCTTTTGAATGTTATACCCAGTAC
CCCATGTCTCGATTAGAGCTGACCACGAAGGAAAATCTGCTTTGAAATTT
TTCACGTTTATGACCGATTCGTGTCCCGACCCACACTTTATCTTTGTTTT
AAAGAGGGTCGCACGGACCAAATTCTGCAGTAGTACGCCCCCGACTGCCT
GTTGCAGTCCTTGGGAGAAGCTCTCCATGTGATCCCATAGGTCCTTCAGA
ATAGCTGCTTTGATGTCCGCCAGCTCCGGGAAACCGTTCCTCCAGGAAAA
GTCATTTTCCACAACCCAACCTAGCTCCGCGATGGCTCTCTGGGCTGTCA
GATCCATTGGCTCCTGGCACTGAGCTGACCCGAGCTCCGGCAGAGAGTGG
AATTTCCATTCGCTCAAAGTGTTGAATTTGTCGATGAATTTGGCTATTTT
ATCCCATGGCCGGGGCGTCCACCTACGTCCCTGGGCGTAACGGCGCTCCG
ACTGGGAGCCCACCCAAGCTGATACCTCCGCTCTCGCCGCCTTAAGTGGC
TGCCGCGGCCAGTCCTGGTGAATCGTGGGCCCAATTTCTTGGTCCGATCT
TGCTTTCTTCAAGCACTCTGGTGGATTCCTCAGCCTCCGCGATGGTGGTC
GGATGGACCAGGCGATAAGCCTGCCATAATTTCGACTGAATTATTTCGCG
TAGCTCAATCCAGTGCTCCAGGCCCAAAGTAAAATCCGGCGGAGGTCTCA
ACTCCGTAGAGCCTCGCGCTGTGGACATTTGTCCCATCAAATTGTCTGAG
CCTCCCATTTGGCTCACTGACGTATCCGGGATCAAGGGCGTATGCCCTGT
TGCAGCCTTTGAGAGTTCCTCCCTGCATTGCCCTCTACGCTCAACGGCGT
CTGTGAAGTCGCGGTGTTTTTCCCGCTGCGCAGTTCTCGGAGGCCCTTCT
TCGCTGCCTATACTTGGAATCAAGGGCATTTGCCCTGTTGCAGTCTCTGA
GGGTTCCCCCTGCATTGCCCTCTACGCTCGATGGCGTCTGTGAAGTCGCG
GATTTTATCCCGCTGCGCAGTTCTCGGAGGCCCTTCCTCGCTGCCTATAC
TCAGAATCAAGGACATCTGCCCTGTTGCAGTCTCTGAGGGTTCTCCCCTG
CATTGCCCTCTACGCTCGGCGGCGTCTGTGAAGTCGCGGATTTTATCCCG
CTGCGCAGGTCTTGGAGGCCCTTCCTCGCTGCCCATACTCGTGCCCATTC
TAACTGCGGTCATCCCTTTCCTCTCCGACGTTCTCCGGGTCGATGCCATT
ACGGCCCTCGGTTTCCCAAGCGAATGAAGTGTCCCTCGATCGAGACTCGC
TTTCCTCGATGGTCCTCAAAGCGATTGAAGTGTCCCTCTATCGAGACTCG
CTTTCCCTGATGATCCTCAAAGCGATTGAAGTGTCCCTCGATCGAGACTC
GCTTTCCCTGATGATCCTCAAAGCGATTGAAGTGTCCCTCGATCGAGACT
CGCTTTCCCTGATGATCCTCAAAGCGACTGAAGTGTCCCTCTATCGAGAC
TCGCTTTCCCTGATGATCCTCAAAGCGATTGAAGTGTCCCTCTATCGAGA
CTCGCTTTCCCTGATGATCCTCAAAGCGACTGAAGTGTCCCTCGATCGAG
ACTCGCTTTAACGATGAGAACGGCCTGACCACCGCCCTACCGTCGACGCC
AAATTGTTATGGGGATTATCCAACTCCCTGTAGATTCTTTGACGGTGGTA
TGTGTCTCGCTCAGGAGACCAGGCGAAGGATGGATGTATAAAAAGGTATC
TTCGTTAACTTTCGTCCCTTGAAGTACCTACCGACTTACTCGTAGAAATG
AAACACGAGGAGTCAAACGTATATCAAGTTACACGTTGCAGACTGAACAG
GTGGGGGTTCACACCACCCTAAAATCAAGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig662:40862..47091-

>mRNA_F-serratus_M_contig662.17609.1 ID=mRNA_F-serratus_M_contig662.17609.1|Name=mRNA_F-serratus_M_contig662.17609.1|organism=Fucus serratus male|type=CDS|length=342bp|location=Sequence derived from alignment at F-serratus_M_contig662:40862..47091- (Fucus serratus male)
ATGGTTACTACAGAGAATTATCTGCACGGCCCAAACCAGAAGTGGGCGTT
AGATTTCTCTCAAACTAAACATATTGCATTCGACTTATGGTTACTACAGA
GAATTATCTGCACGGCCCAAACCAGAAGTGGGCGTTAGATTTCTCTCAAA
CTAAACATATTGCATTCGACTTAAATGAAACACGAGGAGTCAAACGTATA
TCAAGTTACACGTTGCAGACTGAACAGGTGGGGGTTCACACCACCCTAAA
ATCAAGCAAATGAAACACGAGGAGTCAAACGTATATCAAGTTACACGTTG
CAGACTGAACAGGTGGGGGTTCACACCACCCTAAAATCAAGC
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