prot_F-serratus_M_contig660.17582.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig660.17582.1
Unique Nameprot_F-serratus_M_contig660.17582.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length219
Homology
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 9.470e-78
Identity = 123/145 (84.83%), Postives = 137/145 (94.48%), Query Frame = 0
Query:   74 VMAISQAAVEEIENVEEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAISGL 218
            +MA+S AA EEI N+E+VP LKDPVAI+DFEALD+RVG IV+AELIPDP+H NKPSRKYLSLVVDLGNEKRRVVSAVR+IVDVEDAIGK+VL+AANVEEETILG PSRG+LLS SNFSK+PMPRTLRTVLLGGGGVPPGSA+SGL
Sbjct:    2 MMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 192 bits (488), Expect = 3.510e-59
Identity = 102/161 (63.35%), Postives = 123/161 (76.40%), Query Frame = 0
Query:   58 SHGSRGLHFRERGGAPVMAISQAAVEEIENVEEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAISGL 218
            SH  R LH RE      +A+S A  EE  +  +VP L+  V+++ +EALD+RVG IV AE +PDP+H NKPSRKYLSLVV LGNE R ++S VR + DVE+AIGKSVL+ AN EEE ILGRPSRGRLL A+N+SK PMPRTLRTVLLGGG VPPGS ++GL
Sbjct:    5 SHAVRPLHHRE------VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 159 bits (403), Expect = 1.100e-45
Identity = 82/144 (56.94%), Postives = 115/144 (79.86%), Query Frame = 0
Query:   75 MAISQAAVEEIENVE--EVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAIS 216
            MA  + AV+E +N++  ++P +KD V+ +  ++LD+RVG I  A+LIPDPEH+ KPSRKYL L+V++G EKR +V+A R I DVE++IG+SVL+A NVE++T+LG  S GRLLSASN +++P+PRTLRTVL  GGG+PPGS +S
Sbjct:   61 MAFVKGAVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 102 bits (254), Expect = 3.130e-23
Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 0
Query:   54 GLHGSHGSRGLHFRERGGAPVMAISQAAVEEIENVEEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHD---NKP--SRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAISG 217
            GL     S GLH R            A V E  +    P +K  V  S FE++DVRVG I  A+ + D E      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G  S G +L+  N+   PMPR+ + +L G G +PPGS + G
Sbjct:   58 GLQRRVNSPGLHIRAH-------TETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 99.4 bits (246), Expect = 4.400e-22
Identity = 66/160 (41.25%), Postives = 89/160 (55.62%), Query Frame = 0
Query:   61 SRGLHFRERGGAPVMAISQAAVEEIENVEEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHD---NKP--SRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAI 215
            S GLH R            A V E  +    P +K  V  S FE++DVRVG I  A+ + D E      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G  S G +L+  N+   PMPR+ + +L G G +PPGS +
Sbjct:   37 SPGLHIRAH-------TETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQL 189          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A0A2H0VUE8_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_42_34 TaxID=1973936 RepID=A0A2H0VUE8_9BACT)

HSP 1 Score: 73.2 bits (178), Expect = 1.990e-11
Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 0
Query:   66 FRERGGAPVMAISQAAVEEIENVEEVPT-----LKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPPGSAIS 216
            FR+     ++   Q   E+++ V+EV T     LKDP+    FE +D+RV  ++ A  +P        S+K L L+VD+G EKR +VS +    + E  +GK V+I AN+   TI+G  S+G +L+AS      +P+           + PGS++S
Sbjct:  539 FRKVEDEEILLQVQKLGEKLKEVKEVTTTTYQPLKDPITFETFEKIDLRVAQVLEAVKVPK-------SKKLLKLLVDVGFEKRTIVSGIALSYEPEQLVGKKVVIVANLAPATIMGIESQGMILAASLEKSLELPQIQN--------LAPGSSVS 679          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A0A1F8JXF2_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 TaxID=1797606 RepID=A0A1F8JXF2_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 3.650e-11
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   86 ENVEEVPTLKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASN 189
            EN++    LK+ +   DF  LD+RVG I+ AE +       + S K L + VD+G EKR++VS++      ED IGK V+I AN++   ++G  S+G +L+A N
Sbjct:  558 ENLKSFEKLKEEITYEDFSKLDLRVGKIISAEKV-------EKSNKLLKITVDIGFEKRQIVSSIAKTFKPEDLIGKKVIIVANLKTAKLMGIDSQGMILAAGN 654          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: A0A1G8X7N8_9EURY (Methionine--tRNA ligase n=1 Tax=Methanoculleus thermophilus TaxID=2200 RepID=A0A1G8X7N8_9EURY)

HSP 1 Score: 71.6 bits (174), Expect = 6.660e-11
Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   74 VMAISQAAVEEIENVEEVPTLKDP-VAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASN 189
            + A+     E +E  +E    K P V+I +F  LD+RVG IV AE I       K S+K   L+VDLG+EKR+VVS +      E+ +GK V + AN+    I G  SRG +L+A +
Sbjct:  537 IAALEAILNERVEKAKEAAKPKTPTVSIDEFAKLDIRVGQIVSAEPI-------KGSKKLYKLIVDLGSEKRQVVSGIAQFYSPEELVGKDVAMIANLAPAKIFGVESRGMILAAGD 646          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 71.2 bits (173), Expect = 9.020e-11
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 0
Query:   96 DPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTL 199
            + ++I DF  +D+R+G I+ AE IP        S+K L L+VDLG EKR++VS +      ED +G+ V + AN+   TI G  SRG +L+A + +   +P T+
Sbjct:  559 EEISIEDFCRMDIRIGKILKAEPIPK-------SKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Match: L0AB28_CALLD (Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase n=2 Tax=Caldisphaera lagunensis TaxID=200415 RepID=L0AB28_CALLD)

HSP 1 Score: 66.2 bits (160), Expect = 1.410e-10
Identity = 36/103 (34.95%), Postives = 66/103 (64.08%), Query Frame = 0
Query:   94 LKDPVAISDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAVRAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSAS-NFSKKPM 195
            L++ +  S+F  +D+RVG ++ AEL+P+       SRK + L+VDLG E+R++++ ++     ED +GK V++ AN++ + + G  S+G +L+A     KKP+
Sbjct:    4 LEEKIDYSEFSKIDLRVGKVISAELVPN-------SRKLIKLIVDLGTEQRQILAGLQKWYKPEDFVGKFVVVVANLKSKIMGGLESQGMILAAPCGDDKKPV 99          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig660.17582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI9.470e-7884.83tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA3.510e-5963.35tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP1.100e-4556.94Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA3.130e-2340.83tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA4.400e-2241.25Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A2H0VUE8_9BACT1.990e-1132.69Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
A0A1F8JXF2_9BACT3.650e-1138.46Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
A0A1G8X7N8_9EURY6.660e-1139.32Methionine--tRNA ligase n=1 Tax=Methanoculleus the... [more]
UPI001AE5ECDA9.020e-1138.46methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
L0AB28_CALLD1.410e-1034.95Protein containing C-terminal region/beta chain of... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 92..214
e-value: 7.1E-19
score: 69.7
NoneNo IPR availablePANTHERPTHR11586:SF35coord: 92..215
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 92..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..218
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 6.0
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 109..192
e-value: 5.9E-7
score: 29.5
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 102..216
score: 16.133
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 98..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig660contigF-serratus_M_contig660:117327..125153 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig660.17582.1mRNA_F-serratus_M_contig660.17582.1Fucus serratus malemRNAF-serratus_M_contig660 116291..125217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig660.17582.1 ID=prot_F-serratus_M_contig660.17582.1|Name=mRNA_F-serratus_M_contig660.17582.1|organism=Fucus serratus male|type=polypeptide|length=219bp
MMKKISSGIAGVLSCTALFIGTALVTTSTICHAFTVLPRRPFEAPVAAAR
QRPGLHGSHGSRGLHFRERGGAPVMAISQAAVEEIENVEEVPTLKDPVAI
SDFEALDVRVGCIVVAELIPDPEHDNKPSRKYLSLVVDLGNEKRRVVSAV
RAIVDVEDAIGKSVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLR
TVLLGGGGVPPGSAISGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold