mRNA_F-serratus_M_contig658.17544.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 777 bits (2006), Expect = 1.310e-244 Identity = 661/1611 (41.03%), Postives = 851/1611 (52.82%), Query Frame = 2
Query: 509 TALGDYPNCTSNATSSIGDGVCNAFDNNNEACGWDGGDCCECTCTPNSEKALACDSDSFVCLDPDSGCADESLLQYANCTGYLVDIGNGYCNSENNNEACGWDAGDCCECACISSD-HECGTNG-FACVDPDSGCVDSTLV-DFVNCDGDLQTFSDGVCDPDNNNEACGWDGGDCCECTCDGSECLSLDGTECMDPEAASEKNGCLENPPVSLPCLSEQR-QWKVENSSQAYALAEALNCSRGTFEVEWIGYIDVTEPFVVLNGTVLELTGIGSTRAFIDGGGTTGLFTVFNASLVISNITLVNGTSTSGGAIAALGSNVSLSQTAFLGNTATFDGGALFVARESTLAC-DGDTV-------------------------FFNNSAANRGGAVRTSERSRATWTGGV-----SXXXXXAGVXXXXXXXXXXXXXXXXXXXXXXXXNAASGNGGGVHVLDSVVKWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYGDSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSIYYDYNSFINGIGSSXXXXXXXXXXXXXXXXXXXXXSENTAMSGNGGA----------------------------------------LFVGGNASLEGNILFTDNVASNLGGAMCVTSSGSILSWSGDTSFVNNTA------------------------------------DSGGALXXXXXXXXXXXXXXXXXXXXXRLDGGAVSLALSSSS-------------------------------------------------------------------DSSAVISDE-------SSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVN--ATMTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTT-ATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILG--KATIREVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLE 4771
+ + Y +CT + IG+G C+A N +CG+DGGDCC CTC + L DSD F C+ PD C D ++ ++ Y G+G CN ENN+ ACG+D GDCCEC+C+ ECG+ F C DP C D LV +F +C GD DG C+P+NN +CG+DGGD G E +C+DP A E C P + PC ++ W V +S QA ALA A+NCS G+FEVEW+G + V E V +GTVL +TG + A +DG T LFTV NA+L +S I L +G S SGGAIAA GS ++ +QT F+GN A+ +GGA+FV+ S ++C DG T +F+N+AA RGGA+R S A+W+ G XXXXX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AL D S XXXXXXXXXXXXXXXXXX + G+ ++ T GN A L GG + E N D + G V SGS SW G+T NN+A GG + G A+S+ S S D A++S E ++ I+I G T+F N CG +GGA+ L G + VN A++ F N+A V GGAV++S G GP F F SN AQVGGAV GSG + D+E +PTTF C F+ N A ATGGA+ SA+G D F +T F +N A +GGAL LAGTASI C F N +D GG AVSNIG + N +F + C G +L + D L+E C+GC +C GC F +LVP C L L++ +S G TL+ L I GYWRAT + +L CY+ DAC GG+TGT+G+C EGY G YC++CS Y+ ++F C C+ G+ + + + VV V + VV Y+ S + G GRGIV R+ R IPLQS+KI++VAWQI+TQF++VANVT+P VYQ L+ +++ NF+++W+LSAGC+ DFHD+LL+ T+GPI LL YA+AV + L+N+R KHV MVLL+TF VYSSVS+ +F+ FACE L+D K YL ADYRIECDS+KHK ++YAGFMVLLY GIP LY+ LL+R+R++L +A +++ +R STSDLW+PYKPS FYYEV+EC RR+ L G VVFIYPNS AQIA+TL+VAF F ++SE LAPY WD+WI+R GHV+V SMY+ALL+KV+VS E +SSQ + +VLV AHV MV+ E++ + ++ E
Sbjct: 24 SGIAQYDSCTGGNVTDIGNGNCDAA-LNVASCGYDGGDCCSCTCN-DGPLHLCADSD-FDCMYPD--CGDPAVTS-SDAVCYEDVQGDGMCNEENNSAACGYDGGDCCECSCVDGPLFECGSFSIFDCRDP--ACYDPALVAEFPDCTGDWFKIGDGACNPENNIASCGYDGGD-------GGE------LDCVDPSAPEELYECEAPPITTTPCPADSEWNWVVGDSEQALALALAVNCSGGSFEVEWVGTVVVNETIFVTDGTVLTITGAAGSNAALDGNSVTRLFTVVNAALHVSGINLSHGASISGGAIAAGGSTLTFNQTNFIGNVASGNGGAVFVSDGSLVSCADGTTXXXXXXXXXXXXXXXXXXXXXXXGGWWFSNTAAIRGGAMRVQHESSASWSEGAFFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETTTVFDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDGGALVVDYGSIASFGGNFLFEGNEAFGDPEMSANQTGLGGAIRVFEGSVTWDGTVRFIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSGGA---------LYVASWSDVSWSGADETVFDGNQAAXXXXXXAILGSXXXXXXXXXXXXXXXXXXXXXXXXXXLSTLSFGGKSYFENNHAIGDPEFNFTGTGGAVYLSGSTASWVGETEVFNNSAVVYGXXXXXXXXXXXXXXXXXXSYNRAEDPDNEFDVAGGGGMRLVVGSNAVWGGGTTQFIGNDAAYGSAISMDTSVGSWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIFLRNGSTAXXXXXXXXXXXXXFFDGGAIVSPEFDDELNLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIE---PPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASAD--LFEAVCNGCQTACVGCAFADPLLVPTCTDL----LEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAE 1595
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 749 bits (1933), Expect = 2.360e-234 Identity = 720/1631 (44.14%), Postives = 913/1631 (55.98%), Query Frame = 2
Query: 470 FVVLLLRCCTDGVTALGDYPNCTSNATSSIGDGVCNAFDNNNEACGWDGGDCCECTCTPNSEKALACDSDSFVCLDPDSG----------------------------------------------------CADESLLQYA------NCTGYLVDIGNGYCNSENNNEACGWDAGDCCECAC-ISSDHECGTNGFA------CVDPDSGCVDSTLV-DFVNCDGDLQTFSDGVCDPDNNNEACGWDGGDCCECTCDGSECLSLDGTECMDPEAASEKNGCLENPPVSLPCLSE-QRQWKVENSSQAYALAEALNCSRGTFEVEWIGYIDVTEPFVVLNGTVLELTGIGSTR-------AFIDGGGTTGLFTVFNASLVISNITLVNGTSTSGGAIAALGSNVSLSQTAFLGNTATFDGGALFVAR-------------------------ESTLACDGDTVFFNNSAANRGGAVRTSERSRATWTGGVSXXXXXAGVXXXXXXXXXXXXXXXXXXXXXXXXNAASGNGGGVHVLDSVVKWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYG-----------------DSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSIYYDYNSFINGIGSSXXXXXXXXXXXXXXXXXXXXXS-----------------ENTAMSGNGGAL--------------------------------------FVGGNASL---------EGNILFTDNVASNLGGAM-CVTSSGSILSWSGDTSFVNNTA---------DSGGALXXXXXXXXXXXXXXXXXXXXXRLDGGAVSLALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIAL--SGLLSISVNATMTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWG---LVVVSIVGVVSFVGSIYVVLYLVSA-DMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKATI-REVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLE 4771
F V +L C Y CT+ A + IG+G C+A + N +CG+DGGDCC CTC C +F CL PD G C+D + L +C G + IG+ +C+SENNN C +D GDCC C +S D CG +GFA C+DP D T+V +F C G DG C +NNN ACG+DGGDCC C+C G+ C L +C+DP A E C P +LPC +E Q+ W V+ +A+ALA A+NCS G+FEVEW G + + P VV GTVL +TG GS+ A I G T LFTV +A+L +SNIT+ G+ST GGAIAA GS ++L +T F+ NTAT GGA++++ ++F+N A + GA+ ++ S +W V XX XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX D+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX +++Y+ NS I IG XXXXXXXXXXXXXXXXXXX + + ++S +GGA F GG S EG F N AS GA C+ S +SWSG T F+ N+A GGA XXXXX GG +++SS + ++S+ I + AI L L+ S N ++F GNSA V GGA+++S + TGP+F F SNVA++GGAV G G +E + ++PTTF+ C F++N +TGGA+ SA+G+D F + F N A +GGAL LAG A C F GN AD G G AVSNIGY+S V ++ F + C YL + Q D+ +EV C GC +C+GC F +LVP C + E + +SDGG TL+ L ID GYWRAT +S ++L CY+ +AC GG+T T+G+C EGY G YCSVCS+ Y+ + FVC++C + G ++VV VG + +IY Y+ S D MG+G G + R+ R IPLQS+KI+I AWQI+TQF+S+ANVT+PDVY+ L +DM NF++ W LS C DFHD+LL+ T+ PI + L Y A S + L ++ KH SMVLL+TF VYSSVSSI+F+ FACE L D K YLR+DYRIECDS+KHK Q+YA FM+L+Y +GIP LYAGLL+R+R++L + T R RV S +DLW PY FYYEVIEC RR+ L G VVFIYPN+ AQIAVTL++AFAF ++SEAL PY GWD WI+R GHV+VF SM++ LL+KV VS EH +SQR+ VLVA H MV+A+ VE+V + F + E
Sbjct: 10 FAVYILLLCPLLHGGAAQYDTCTNGAIADIGNGRCDA-ELNVPSCGYDGGDCCSCTCVDG--PLYWCSEGTFDCLYPDCGDNPASDLEFFETQDNTTKCNMFQNYPECNTLWSDCCEMDCGGDYYCDTYRFDCSDSTCLSQTVVAENPDCAGDWLTIGDEFCDSENNNPECAYDGGDCCADTCPLSIDSACGFDGFADYSGFDCLDP--AFFDPTVVAEFPECTGSWSMIGDGQCQEENNNPACGYDGGDCCICSCSGTLCGGL--ADCLDPSAGDEFYECSPPSPEALPCSAEVQQTWVVDEQEEAHALAAAVNCSGGSFEVEWSGTVVMEMPIVVGAGTVLTITGAGSSTVGDDDSGAVIHGNEGTRLFTVVDAALYLSNITIAFGSSTVGGAIAAAGSTLTLVETMFIANTATDHGGAIYLSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWFSNEAGHSAGAMMVNDGSSLSWAEEVDLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCSGEADSWFHXXXXXXXXXXXXXXXXXXXFAGNFSTLDNGAYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSIEGXXXXXXXXXXXXXXXXXXXXPTLFYN-NSVIGRIGRGXXXXXXXXXXXXXXXXXXXYNNCQGDTTDALAGCAIAATDGASVSWSGGATHFTMNFGVSLVSLGGAMEVDXXXXXXXXDTEFDTNFVGFGGGAISATEGARVSWGEGTTTFLGNFASYRAGAFDCIDS---YISWSGTTEFIGNSALFLVNSTLGGEGGAASVLSCNVXXXXXTIFTSNVAQSEGGG-----ITASSGNDGILSN-----ITMNAXXXXXXXXXXXXXXAIVLFEDAALNTSFNVDISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCG------IEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQ-QSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVME----HATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIY--SYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVVLFFQLRAE 1606
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 706 bits (1822), Expect = 1.630e-220 Identity = 647/1455 (44.47%), Postives = 838/1455 (57.59%), Query Frame = 2
Query: 827 CCECACISS---DHECGTNGFACVDPDSGCVDSTLV-DFVNCDGDLQTFSDGVCDPDNNNEACGWDGGDCCECTCDGSECLSLDGTECMDPEAASEKNGCLENPPVSLPCLSEQRQ-WKVENSSQAYALAEALNCSRGTFEVEWIGYIDVTEPFVVLNGTVLELTGIGSTRAFIDGGGTTGLFTVFNASLVISNITLVNGTSTSGGAIAALGSNVSLSQTAFLGNTATFDGGALFVARESTLACDGDTVFFNNSAANRGGAVRTSERSRATWTGGVSXXXXXAGVXXXXXXXXXXXXXXXXXXXXXXXXNAASGNGGGVHVLDSVVKWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYGDSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSIYYDYNSFINGIGSSXXXXXXXXXXXXXXXXXXXXXSENTAMSGNGGALFV-GGNASLEGNILFTDNVASNLGGAMCVTSSG-------------------------SILSWSGDTSFVNNTAD---------------------------------------------SGGALXXXXXXXXXXXXXXXXXXXXXRLDGGAVSL------------------------------------ALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVN-ATMTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKATI-REVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLEESVGPRRRATARFPLRWRKESVAIHG 4849
CCEC+C SS +H CG NGF C D+ C+D +LV +F +C GD T DG C NNN+ CG+DGGDCC C+C G C+ EC+DP A E + C +P ++LPC ++ +Q W VE+S+QA ALA A+NCS G FEVEW G + V +PF V++GTVL ++G S+ A ++G +T +FTV NA L +S++ + G+ST+GGAIAA S+++L+ T F+GNTA+ GGA++V+ DG +V+ T + +S XXXX XXXXXXXXXXXXXX +A+ G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +S ++ G++ NT + G GGAL V G NAS G + FT N A GGA+ V S +SW GDT NN+A+ SGG GG A+ S S S ESS ++I G T F N CG +GG++AL S+ +N A ++F GNSA GGAV++S G GP F F SN AQVGGA GSG +P+ PT F+ C F++N A +GGAV SA+GQD N+ F N A GGAL LAG ++ G AVSNIG +S ++NS+F + +C +L + D+ +E CDGC +C GC F VP C S+V +D+ +S GG TL+ L ID GYWRAT++S IL CYN DAC GG+TGTAG+C E Y G YCS+CS YA + + C++C SR G+V + V++ ++ V++Y++S + ++ R+ +PLQS+KI+IV+WQI+TQF+S ANV +P VYQ+ LD + + F++ W++SAGC+ FH +LL T+GPI + LL YA+A + L+ I DKHV + LL+TFLVYSSVSS +F+ FAC+ L+D KNYLR DYRIECDS+KHK Q+YAGFM+LLYP+GIP+LY+ LL+++R +L K R+ SARVKSTS+LW+PYKPS FYYEVIEC RRI LTG VVFIYPN+ AQ+A+TL++AF FA+LSEA++PY W++W++R GHV+V +SMYVALL+KV+VS E A SQ + +VLV H CM+L+V VE+ + T RR P R+R+ G
Sbjct: 27 CCECSCASSSSAEHSCGENGFNC--RDTTCLDLSLVAEFPDCTGDYLTVGDGSCSKANNNDLCGYDGGDCCVCSCQGVNCMRT-SFECLDPSANEELHDCEPSPQLALPCTADAQQTWVVESSTQAQALAAAVNCSGGLFEVEWRGRVVVGQPFYVVDGTVLTISGADSS-AVVEGNASTRIFTVVNADLYLSHVNVSYGSSTTGGAIAAARSSLTLNGTNFVGNTASAYGGAIYVS-------DGSSVYCVXXXXXXXXXXXXXXXXXVTGSXVISGXXXXX---------XXXXXXXXXXXXXXSGSSASWGEESMFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTTHANNWVGDFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDSSLSFGGNTSFESNRALGDL------------NTEI-GWGGALHVDGSNASSSGQVKFTGNSA-RYGGALYVLHGSXXXXXXXXXXXXXXXXXXXXXXXXFSAMSWFGDTQMFNNSAEXXXXXXXXXXXXXXXXXXXXTENRVTGDAAAGGIICAVFASTIYWSGGLTRFIGGSSSFVGGALYVSGSEVTWSGGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGAMMSPSYDSEYNPLESS--LVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGML---SPII-PTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEY-DATDNGTFEAVCDGCRVACDGCSFDEPPAVPTC---SDV-MDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWT--------RRLREDLPARFRRGKFLFRG 1428
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 672 bits (1734), Expect = 1.420e-209 Identity = 368/734 (50.14%), Postives = 507/734 (69.07%), Query Frame = 2
Query: 2615 LDGGAVSLALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVNA-TMTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNIL-GKATIREVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLEESVGPRRRATARF 4810
LDGG + S S+DS +S++ ST +++ G T F+ N CG +GGA+AL G L++++ ++F GN+A+V GGAV++S G GP+F GA+F SN AQVGGAV GSG K+ + +PTTF++C F++N A ATGGA+ SA+GQD F N+ F N A +GG L LAGTAS+ C F N++D GG AVSNIG L V N TF ++ C+ G YL + + +E AC GC +C GC F V P C + E +++S GG TL++L ++ GYWRA+ +S + CYN+DAC GG+TG AG+C +GY G YC+VCS Y + F CT+C+ + + +++ VV + V Y +S + G+V R+ + IPLQS+KI+IVAWQI+TQF+SVANVT+PDVY+R LD +D+ NF+++WVLSAGC+F DFHD+LL T+ P++ + L YA+AVS +L+ I +KHVS+VLL+TFL+YSSVS+ +F+ F CE L+D NYLRADY I+CDS+KHK Q+YAGFMV++Y +GIP LYA LL+R+R++L RE +AR STSDLW+PYKPS FYYEVIEC RR+ L G VVFI+PN+ AQIA+TL++AFAF M+SE LAP+ WD+W++RTGH +VF+SMY+ALL+KV+VS E A SQR+ VLVAAH CM+LAV E+ +T+S+ +E+ R+ T RF
Sbjct: 535 LDGGVIG---SFSTDS---VSNQGST-LVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNL--KENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNP--YEAACGGCETACDGCFFEPPVP-PTCTDVME----HITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQ----RQEPTTRF 1248
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 661 bits (1706), Expect = 2.260e-208 Identity = 354/679 (52.14%), Postives = 464/679 (68.34%), Query Frame = 2
Query: 2753 AIALSGLLSISVNATMT-FHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEH---PTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKATI-REVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLEE 4774
A+AL G LS+++ T F GN+A V GGA+++S GP F SN AQVGGA+ GSGT+ NP ++ PTTF C F +N A ATGGAV +A+GQDKF N+ F N A +GGAL LAGTA + C F N++D GGG AVSNIG++S VSN +F ++ C++G +L E L+E CDGC C+GC F LVP+C L++ +S GG TL LVI+ GYWRAT +S N+LECYN DAC GG+TG+ +C EGY G YC+VCS Y + C++C+ R + + V V + ++ +V Y VS + G RG+V R R +PLQS+KI+IVAWQI+TQF+SVAN+ FP VYQR LDA+++ NF++ WVLSAGC+F DFHD+LL+ T+ PIV + L +YA+A S L+ + KHVS+VLL+TFLVY+SVS+++FQ FACE LDD KNYLRADYRIECDS KH Q+YAGFM++LY +GIP LY G L+R+ ++L + RE AR+ T+DLW+PY+PS FYYEVIEC RR+ L G VVFIYPN+ AQIAV L++A FAM+SEALAPY WD+W+ R GH +V +SMYVALL+KV+VS E ASSQR+ S+LVAAHVCMV V +E + S+ +E+
Sbjct: 295 ALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSF------NPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGT--LYEAICDGCPVECEGCSFEEPQLVPKCSD----ALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEK 961
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 673 bits (1736), Expect = 1.620e-207 Identity = 668/1483 (45.04%), Postives = 865/1483 (58.33%), Query Frame = 2
Query: 638 CTPNSEKALACDSDSFVCLDPDSGCADESLLQYANCTGYLVDIGNGYCNSENNNEACGWDAGDCCECACISS---DHECGTNGFACVDPDSGCVDSTLV-DFVNCDGDLQTFSDGVCDPDNNNEACGWDGGDCCECTCDGSECLSLDGTECMDPEAASEKNGCLENPPVSLPCLSEQRQ-WKVENSSQAYALAEALNCSRGTFEVEWIGYIDVTEPFVVLNGTVLELTGIGSTRAFIDGGGTTGLFTVFNASLVISNITLVNGTSTSGGAIAALGSNVSLSQTAFLGNTATFDGGALFVARESTLACDGDTVFFNNS-------------AANRGGAVRTSER------------SRATWTGGVSXXXXXAGVXXXXXXXXXXXXXXXXXXXXXXXXNAASGNGGGVHVLDSVV-----------KWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALY-----------------------------------------------GDSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSIYYDYNSFINGIGSSXXXXXXXXXXXXXXXXXXXXXSEN--TAMSGNGGALFVGGNASLE---GNILFTDNVASNLGGAMCVTSSGSILSWSGDTSFVNNTADSGGALXXXXXXXXXXXXXXXXXXXXXRLDGGAVSLALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVN-ATMTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKATI-REVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVES--VAMTFSVTLEESVGPRRR 4795
C N +L C+ F CL D C S + A C G+ +C+ NNN +C +D GDCCEC+C SS ++ CG NGF C D+ C+D +LV +F +C GD T DG C NNN+ CG+DGGDCC C+C G C++ EC+DP A+ E + C +PP++LPC ++ +Q W VE+S+QA ALA A+NCS G FEVEW G + V EPF V++GTVL ++G S+ A ++G +T +FTV NA+L +S + + G+ST GGAIAA S+++L+ T+F+GN A+ GGA++++ S++ C T N + GG S A+W G VS XX XXXXXXXXXXXXXXXXXXXXXXXX W G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GD + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F N S+ XXXXXXXXXXXXXXXXXXX+EN T +S GG + +++ G F + +S GGA+ V SGS ++WSG T XXXXXXXXXXXXXXXXXXXXX GGAV +S S DS+ + +++ I G T F N CG +GG +AL G S+ +N A ++F NS A GSG + + + V PT FN C F++N A A+GGAV SA+GQD N+ F N A GGAL ++ G AVSNIG +S ++NS+F + +C +L + D +E CDGC +C GC F VP C S+V +D+ +S GG TL+ L+ID GYWRAT++S IL CYN DAC GG+TGTAG+C E Y G YCS+CS+ YA + + C++C SR G+ + VV+ ++ V+ Y++S + + R+ +PLQS+KI+IV+WQIVTQF+S ANV +P VYQ+ +D + + F++ W+LS GC+ DFH +LL T+GPI + LL YA+A + L+ I DKHV + LL+TFLVYSSVSS +F+ FAC+ L+D NYLR DYRIECDS+KHK Q+YAGFM+LLYP+GIP+LY+ LL+R+R +L K R SARVKSTS+LW+PYKPS FYYEVIEC RR+ LTG +VFIYPN+ AQ+A+TL++AF FA+LSEA++PY W++W++R GHV+V +S+YVALL+KV+VS E A SQ + +VLV H CM+L+V VE+ VA + L E V R R
Sbjct: 27 CKGNCTSSLLCEDSDFDCLYSD--CDPASTTEVATCEESWK--GDSWCDEINNNPSCDYDGGDCCECSCASSSSAEYSCGENGFNC--RDTTCLDLSLVAEFPDCTGDYLTVGDGSCSEANNNDLCGYDGGDCCVCSCQGVNCMTT-SFECLDPSASEELHDCEPSPPLALPCTADAQQTWVVESSAQAQALAAAVNCSGGLFEVEWRGRVVVGEPFNVVDGTVLTVSGADSS-AVVEGNASTRIFTVVNANLYLSGVNVSYGSSTVGGAIAAARSSLTLNGTSFVGNAASSYGGAIYLSDGSSVYCVRSTFSXNEXXXXXXXXXVTGXXVVSGGGXXXXXXXXXXXXXXXXXXDSSASW-GEVSMFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYANNWVGDYGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMDSSLSFGGNTSFESNRALGDLNTEVGWGGALLVQDGSNASSSGQVKFTGNSARDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMFNN---SAVLXXXXXXXXXXXXXXXXXXXTENRVTGVSAAGGIICAVLASTIHWSGGLTRFIGSSSSLAGGALYV--SGSEVTWSGGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGGAV---MSPSYDSTY---NPLESSLAINGTTTFFNNTCGENGGGLALLGAFSLDINTADVSFTENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASVFGSGND--RGILSPVV--PTKFNRCRFIDNVATASGGAVDSAAGQDIVVNSVFKGNSAEVGGALRXXXXXXXXXXXXXXXVSGHQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEF-DTSGDGTFEAVCDGCRVACDGCSFDEQPAVPTC---SDV-MDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDG-NYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLREDVPARFR 1479
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 652 bits (1683), Expect = 4.680e-205 Identity = 394/813 (48.46%), Postives = 526/813 (64.70%), Query Frame = 2
Query: 2375 GGALFVGGNASLEGNILFTDNVASNLGGAMCVTSSGSILSWSGDTSFVNNTADSGGA----LXXXXXXXXXXXXXXXXXXXXXRLDGGAVSLALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVNATMT-FHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKATI-REVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLEESVGPRRR 4795
GGA+ G N F +N A + GGA+ +T S +SW G T F++ L XXXXXXXXXXXXX G+V+ S +V+S E ST + I+G T F+ N G +GGA+AL G LSISVN T F NSA++ GGAVY+S GP F FDSN AQVGGAV + GSG K EN+ + PTTF+ C F N A ATGGAV SASGQD F +T F N A +GGAL LAG AS++ C F NL+D G G AVSN+G +S++SN+TF ++ +C +L+ + G + + AC GC +C GC + P + L + + SDGG+ TL+ L ID GYWRATN+S +L CYN DAC GGITG +C EGY G YC++CS +Y+ + F C++C +R G+++ + + V+ + VV Y+ +G + + R +PLQ+LKI++VAWQIVTQF+S ANVT+PDVYQR L+ +D+ NF+++WVLSAGC+ DFHD+LL+ T+GPI+ + L Y + + L+ + D+HVSMVLL+ FLVYS VSS+VFQ FAC+ L+ YLRADYRIECDS+KH+ ++YAGFM+LLYP+GIP Y LL R+R++L K RE RV S S+LW+PY+PS +YYEVIEC RRI LTG VVFIYPN+ AQIA+TL++ FA+LSEAL PY WD+W+SR H +VFMS+YVALL+KV+VS+E SSQ++ +VLVAAH CM+LAV VE++ + ++E P R
Sbjct: 219 GGAIAASGATLAFNNTSFVNNSAGSNGGALWLTDSS--VSWGGGTEFISXXXXXXXXXXXXLNGSYVSSTXXXXXXXXXXXXXXXXVGSVA--------SDSVLSPEDST-LSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNV--KGGENDQLL-PTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTSG---DALDEACSGCQTTCDGC------VQPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAPR 1008
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 641 bits (1653), Expect = 2.170e-198 Identity = 572/1275 (44.86%), Postives = 728/1275 (57.10%), Query Frame = 2
Query: 1034 TCDGSECLSLDGTECMDPEAASEKNGCLENPPVSLPCLSE-QRQWKVENSSQAYALAEALNCSRGTFEVEWIGYIDVTEPFVVLNGTVLELTGIGSTRAFIDGGGTTGLFTVFNASLVISNITLVNGTSTS-GGAIAALGSNVSLSQTAFLGNTATFDGGALFVARESTLACDGDTVF----FNNSAANRGGAVRTSERSRATWTGGVSXXXXXAGVXXXXXXXXXXXXXXXXXXXXXXXXNAASGNGGGVHVLD-SVVKWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYGDSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSIYYDYNSFING--IGSSXXXXXXXXXXXXXXXXXXXXXSENTAMSGNGGALFVGGN-----ASLEGNILFTDNVASNLGGAMCVTSSGSILSWSGDTSFVNNTADSGGALXXXXXXXXXXXXXXXXXXXXXRLDGGAVSLALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVN-ATMTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTT-ATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRK-WGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRG-IVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYAS-AVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKATI-REVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSV-TLEESVGPRRR 4795
TC ++C S +C+DP +++ C E PP +LPC +E Q+ W V +S++A ALA A+NCS G+FEVEW G + V P V +GT++ +TG+GST A IDG T LFTV +ASL + N+ + G S + GG IAA GS V+L+ T+ +GN AT GGA++ + ST++C GDT F A W G N A +GG ++ + S V WS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXX XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX +GS XXXXXX SG GGAL V G L G+ F N A +GG + + + + G XXXXXXXXXXXXXX S L S + + S+T++I G T F+ N CG SGG +A LS+ ++ A +TF GN+A+V GGAV++S G G VF AV GSG DLE PTTF+ CSF+ N A ATGGA SA+GQD F FV N A +GGAL +AGTAS+ C F N++D G G A+SNIG++S +++ F D++ C G +L ++ D +E C GC C GC F ++ P C SEV + + +S GG TTL+E+ ID GYWRAT+ S +LEC+ DAC GG+TGT+G+C EGY G YCS+CS Y + F CT+C+ K G+VV Y++S D G G +V R+AR IPLQS+KI+IV+WQI+TQF+SVANVT+PDVYQ LDA+D+ NF+++WV S GC+F DFHD+LL+ T+ P+V +S L A+ A + +N N+ KHVSM LL+TFLVYS+VSS++FQ FACE L D KNYLR+DYRIECDS+ HK Q+YAGFM++LYP+GIP LYAGLL+R+R++L K I RE RV STS LW PYKPS FYYE+ AVTLV+A AF +LSEAL PY WD+W SR GH++V +SMYVALL+KV+VS E ASSQR+ ++LVA H CMV V VE++ ++ S+ +E PR R
Sbjct: 4 TCSHADCYSS-LFDCLDPGSSNGFYECQEPPPATLPCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGST-AVIDGHAATRLFTVVDASLHLRNVNISYGASRAVGGGIAAAGSRVTLNHTSIVGNRATGHGGAVYASNGSTVSCLGDTAFNXXXXXXXXXXXXXXXXXXXXXGAAWLG-----------------------------------NVAGDSGGAIYAGNGSSVSWSDDAVFVESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTFTNNSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVYVQTASSISWAGHAESVFDGNQALIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEVGSGCNASFGGNXXXXXXSAVG---DPGILESGFGGALLVVGRELPAGVFLGGSTAFVGNFAEKVGGGLVASYATAAWGXXXXXXXXXXXXXXGAVFVVNGSSVXXXXXXXXXXXXXXXXXXXVASPILDS-------VYNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLE---WPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDP--FEAVCAGCDIVCDGCVFEQGLVGPAC---SEV-MAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPR 1198
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 626 bits (1614), Expect = 5.810e-190 Identity = 585/1478 (39.58%), Postives = 770/1478 (52.10%), Query Frame = 2
Query: 959 FSDGVCDPDNNNEACGWDGGD----------CCECTCDGSECLSLDGTECMDPEAASEKNGCLENPPVSLPCLSE-QRQWKVENSSQAYALAEALNCSRGTFEVEWIGYIDVTEPFVVLNGTVLELTGIGSTRAFIDGGGTTGLFTVFNASLVISNITLVNGTSTSGGAIAALGSNVSLSQTAFLGNTATFDGGALFVARESTLACDGDTVF--------------------------FNNSAANRGGAVRTSERSRATWTGGVSXXXXXAGVXXXXXXXXXXXXXXXXXXXXXXXXNAASGNGGGVHVLDSVVKWSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALYGDSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNSIYYDYNSFINGIGSSXXXXXXXXXXXXXXXXXXXXXSENTAMSGNGGALFVGGNASLEGNILFTDNV-----------------------------------------ASNLGGAMCVTSSGSILSWSGDTSFVNNTADSGGALXXXXXXXXXXXXXXXXXXXXXRL---------------------------------------------------------------------------------------------------------------DGGAVSLALSSSSDSSAVISDESSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVNAT-MTFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGR--GIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVSRPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNIL-GKATIREVSARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMKVEVSSEHASSQRLLASVLVAAHVCMVLAVAVESVAMTFSVTLEESVGPRRRATARFP 4813
+G+C+ NNN C +DGGD CC CTC G+ C S+ +C+DP+A E C PP +LPC +E Q+ W V++S+QA ALA A+NCS G+FEVEW G + V F V++GT L +TG GS+ A IDG T LFTV NA+L ++ + + +G ST+GGAIAA G+ ++L+QT FL NTAT +GGA++++ S++ C G F F N A + GA+ S +W+ A XXXXXXXXXXXXXXXXXXXXXX XXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX G+S XXXXXXXXXXXXXXXXXXXXXXXXXX + S I+ G + XXXXXXXXXXX A F+ A+ +G L+ A GG S +F +N A GGAL XXXXXXXXXXXXXXXXXXXX DGGAV+ S+S+S + I G T F N G +GG +AL +++++ ++F GNSA V G A+++SS+ GP F + GSGT + DL PTTF+ C F+ N A +TGGA++SA+G+D N+ F N A +GGAL LAG A I C F N +D G G AVSNIG++S ++N++F + C G + +V+ D +E C+GC +C GC F L P C + +D+ +SDGG TL+ L ID G+WRA+ +S +L CY+ DAC GG+TG +G+C EGY G YC +CS Y ++F C++C+ G + V++V + V V+ V++ +G GR GIV + R IPLQSLKI+IV+WQI+TQF+SVANVT+PDVYQ LLD +D+ NF+++W+LSAGC+ +FH +LL+ T+ PIV + LL YA+A L I +KHV++VLL+TF VYSSVSS +F+ FAC+ LD K+YLRADY IEC+S++H+ +Q+YAGFM+++Y +GIP LYA LL+++R++L + RE RVKS S+LW PYKP+ FYYEVIEC RR+ L G VVFIYPN+ AQIAVTL++AFAFA+LSE LAPY WD+WISR GH++VF+SMYVALL+KV+VS E ASSQ + SVLVA HVCM+L V VE+ +S+ E RR +A P
Sbjct: 74 IGNGLCEEGNNNVFCSYDGGDVSLVACSSLLCCYCTCSGALCQSVT-FDCLDPDADDEFYECEAAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVESVFYVVDGTTLSITGDGSSAA-IDGNAATRLFTVVNATLHLTGVDVTSGASTTGGAIAAAGATLTLNQTNFLRNTATGNGGAIYLSDGSSMVCSGGGSFTXXXXXXXXXXXXXXXXXXXXXXXSWFGNVAGDSAGAIIVDGESSLSWSEDAIFGFNLAETWGXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXESNYATSTTSGXXXXXXXXXXXXXXXXXXXXXXXXAAEVIGGAVWVANGSEASCTGDEAISTFSGNSAGHGGAIVSEDSGISFEGNSSFDSNRAVGLAGDTXXXXXXXXXXXXXXXXXXXXXXXXXXVQF-------GGAIFSLTSQISWAGETALVENSGAVGXXXXXXXXXXXXXXXAS-------FLRNYATEDGXXLYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFGGGGMEFSVXXXXXXXXXXTFAHNRAVLGGALYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLIRNGANVXXXXXXXXXXXXXVLGDGGAVATNALSTSNS----------ILFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDL-------PTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDH--FEAICNGCETTCDGCVFAEGSLAPICTEV----MDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREE-----RRSLSAASP 1504
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 616 bits (1588), Expect = 7.500e-188 Identity = 333/658 (50.61%), Postives = 443/658 (67.33%), Query Frame = 2
Query: 2684 SSTTIIIEGRTNFIYNKCGWSGGAIALSGLLSISVNATM--TFHGNSADVYGGAVYISSMGTGPVFKGAQFDSNVAQVGGAVYAAGSGTTATKDLENNPVEHPTTFNNCSFMNNTAQATGGAVSSASGQDKFYNTRFVNNVARSGGALSLAGTASIIKCFFEGNLADSGGGPAVSNIGYLSDVSNSTFIDSIVSCEKGFYLHVSEGQDDELWEVACDGCLESCKGCDFGGTVLVPECISLSEVGLDYVSSDGGVTTLKELVIDEGYWRATNTSMNILECYNNDACNGGITGTAGFCREGYHGAYCSVCSSNYAPGINFVCTQCTSRKWGLVVVSIVGVVSFVGSIYVVLYLVSADMMGSGRGIVNRIARRIPLQSLKIIIVAWQIVTQFSSVANVTFPDVYQRLLDAVDMLNFEVTWVLSAGCMFSFDFHDKLLIVTLGPIVLMSLLGILYASAVS-RPCCSENALKNIRDKHVSMVLLITFLVYSSVSSIVFQMFACEVLDDDKNYLRADYRIECDSAKHKTLQIYAGFMVLLYPMGIPLLYAGLLYRNRNILGKA-TIREVS-ARVKSTSDLWRPYKPSRFYYEVIECVRRISLTGAVVFIYPNSLAQIAVTLVVAFAFAMLSEALAPYDVGWDSWISRTGHVIVFMSMYVALLMK 4642
S +T+ G T F N+CG +GG +AL G ++ ++ M +F N+A V GGAV++SS GTG F F SN AQ+GGAV GSG +K +E+ +PTTF+ C F+ N A ATGGA+ +A+G D F +T F +N A +GGAL LAGTASII C F N ++ GGG AVSNIG +S F + C G +L +E D+L+E CDGC F +LVP C L L++ +S G TL+ L I GYWRAT TS +L CY+ +AC GG+TGTAG+C EGY G YC+VCS ++ F C +C+ G+V+ + V ++ VV Y+ S G G+GIV R+A IPLQS+KI++VAWQ+VTQF+ VAN+T+PDVYQ LD + + NF++ W+LSAGC+ DFHD+LL+ T+GPI+ + +L YA+A ++ L+N+ DKHV +VLL++F VYSSVSS +F+ FACE L D KNYLRADYRIECDS++HK ++YAG M+L+Y +GIP LY LLYR+R+ L + T +E +RV STSDLW+PY+PS FYYEVIEC RR+ L G VVFIYPNS AQIA+TLV+AF F ++SE+L+PY WD+WISRTGHV+V SMYVALL+K
Sbjct: 713 SESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSG--GSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNES--DDLFETVCDGCQTXXXXXAFAEPLLVPMCRDL----LEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig658.17544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig658.17544.1 >prot_F-serratus_M_contig658.17544.1 ID=prot_F-serratus_M_contig658.17544.1|Name=mRNA_F-serratus_M_contig658.17544.1|organism=Fucus serratus male|type=polypeptide|length=1486bp MCSVTAYHAVQLFVVLLLRCCTDGVTALGDYPNCTSNATSSIGDGVCNAFback to top mRNA from alignment at F-serratus_M_contig658:6904..37577+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig658.17544.1 ID=mRNA_F-serratus_M_contig658.17544.1|Name=mRNA_F-serratus_M_contig658.17544.1|organism=Fucus serratus male|type=mRNA|length=30674bp|location=Sequence derived from alignment at F-serratus_M_contig658:6904..37577+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig658:6904..37577+ >mRNA_F-serratus_M_contig658.17544.1 ID=mRNA_F-serratus_M_contig658.17544.1|Name=mRNA_F-serratus_M_contig658.17544.1|organism=Fucus serratus male|type=CDS|length=8916bp|location=Sequence derived from alignment at F-serratus_M_contig658:6904..37577+ (Fucus serratus male)back to top |