mRNA_F-serratus_M_contig657.17542.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 248 bits (634), Expect = 1.220e-68 Identity = 157/484 (32.44%), Postives = 258/484 (53.31%), Query Frame = 1
Query: 4 SEMDGQLAHQVWGVVPRPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVK--KTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLLD----AADRRQEHN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
SE+ + W +V R G +G + +F +K + GR+ YK R +A+GF++ G+ + P + SIR++L + K + +LD D A++ +++K ++++E+P N+ + +L KA+YGL A ++ A G C D V+ + ++N V +++A++T ++ ++ L+S F +K+LG+ +F LG I DR A TL Q Y+ + S+F + K P +G K L+K +P T AE E+MR PYR +G L+ T TRPD+ Y QL F +NPG HW+AA R L+YL TK GI Y G +G + A+ DAD+ + D RRSVSG +M+GG + + S+ ++ A +S+E+EYMAL+ E+ + R + L A + E N G + G + + +HH +R+ V ++ + YV + +Q AD+LTKAL
Sbjct: 858 SELKAHADNGSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTKDNYVYVCLYVDD-MIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMK-LTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVA-MEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRTMLKDLGHEQVGATQVWEDNQGAIALASNAGYNARTK-HVDIRHHFIRENVARDIILVGYVGTEDQLADMLTKAL 1337
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 234 bits (598), Expect = 1.020e-67 Identity = 163/491 (33.20%), Postives = 251/491 (51.12%), Query Frame = 1
Query: 1 KSEMDGQLAHQVWGVVPRPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVF-RQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVK--KTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLLDAADRRQ----EHN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKALDINTF 1452
K+E D + W V R V+ TK +F +K + G I +K R +A GF ++ G+ + S SIR+ L + + L +LDVD A++ A++K ++YIE PE D+V +L KALYGL AG K+ L G + C +D ++ + + + + ++T+ DE + + R F IK+LG + LG I DR L+ +Q HYV+T+ +F + + T P K LSK D P+ + + EM PYR +G L A TRPDI +A L F +NPGP HW AA R L+YL T+ GI+YGG T + + DAD+ T D RRSVSG +M+ GG I + ++ + A +SSE+EY+AL+ E+ ++R + L ++ E N G ++ G + + +HH VRD V ++++ YV++ Q AD+LTK+L F
Sbjct: 14 KAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAAR--FRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLK-LSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTK-HIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRF 499
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.030e-64 Identity = 162/485 (33.40%), Postives = 255/485 (52.58%), Query Frame = 1
Query: 1 KSEMDGQLAHQVWGVVP-RPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVKKTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLL-----DAADRRQEHN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
+ E +G L + V P+G+ + +K F K K+G+I T+K R +A+GF +I + Y P S ASI++ML +A K L DV AY A + E++++LP + S ++ + ++A+YGL +G + L G EQC+ DP VFR+++ E VV+ +LVA + D E+ + L FP K+LG+ +++ GC I +D +AGTL Q Y+ +M +F VK TS PA GA D P+ E EE P REA+G++M +T +RPD+++A + P HW A + L YL T+ +GITY GS L+ +VDA ++ D RRSVSG +GG +S S+ + + + +S+E+EY+A E V E F+R V + ++ + E N G Q+ + + ++H +R G + + +V + EQHAD+LTKAL
Sbjct: 757 REEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPKRE--DEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIA-LVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.350e-64 Identity = 162/485 (33.40%), Postives = 255/485 (52.58%), Query Frame = 1
Query: 1 KSEMDGQLAHQVWGVVP-RPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVKKTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLL-----DAADRRQEHN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
+ E +G L + V P+G+ + +K F K K+G+I T+K R +A+GF +I + Y P S ASI++ML +A K L DV AY A + E++++LP + S ++ + ++A+YGL +G + L G EQC+ DP VFR+++ E VV+ +LVA + D E+ + L FP K+LG+ +++ GC I +D +AGTL Q Y+ +M +F VK TS PA GA D P+ E EE P REA+G++M +T +RPD+++A + P HW A + L YL T+ +GITY GS L+ +VDA ++ D RRSVSG +GG +S S+ + + + +S+E+EY+A E V E F+R V + ++ + E N G Q+ + + ++H +R G + + +V + EQHAD+LTKAL
Sbjct: 1136 REEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPKRE--DEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIA-LVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 237 bits (604), Expect = 1.400e-64 Identity = 162/485 (33.40%), Postives = 255/485 (52.58%), Query Frame = 1
Query: 1 KSEMDGQLAHQVWGVVP-RPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVKKTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLL-----DAADRRQEHN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
+ E +G L + V P+G+ + +K F K K+G+I T+K R +A+GF +I + Y P S ASI++ML +A K L DV AY A + E++++LP + S ++ + ++A+YGL +G + L G EQC+ DP VFR+++ E VV+ +LVA + D E+ + L FP K+LG+ +++ GC I +D +AGTL Q Y+ +M +F VK TS PA GA D P+ E EE P REA+G++M +T +RPD+++A + P HW A + L YL T+ +GITY GS L+ +VDA ++ D RRSVSG +GG +S S+ + + + +S+E+EY+A E V E F+R V + ++ + E N G Q+ + + ++H +R G + + +V + EQHAD+LTKAL
Sbjct: 1299 REEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPKRE--DEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIA-LVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 236 bits (601), Expect = 3.420e-64 Identity = 161/485 (33.20%), Postives = 255/485 (52.58%), Query Frame = 1
Query: 1 KSEMDGQLAHQVWGVVP-RPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVKKTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLL-----DAADRRQEHN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
+ E +G L + V P+G+ + +K F K K+G+I T+K R +A+GF +I + Y P S ASI++ML +A K L DV AY A + E++++LP + S ++ + ++A+YGL +G + L G EQC+ DP VFR+++ + VV+ +LVA + D E+ + L FP K+LG+ +++ GC I +D +AGTL Q Y+ +M +F VK TS PA GA D P+ E EE P REA+G++M +T +RPD+++A + P HW A + L YL T+ +GITY GS L+ +VDA ++ D RRSVSG +GG +S S+ + + + +S+E+EY+A E V E F+R V + ++ + E N G Q+ + + ++H +R G + + +V + EQHAD+LTKAL
Sbjct: 1156 REEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPKRE--DEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITY--QRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIA-LVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 231 bits (588), Expect = 1.600e-62 Identity = 151/485 (31.13%), Postives = 258/485 (53.20%), Query Frame = 1
Query: 7 EMDGQLAHQVWGVVPRPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVKKTSTTPAAAGAKP---LSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLLDAADRRQE-----HN*GR*RRSYQDGDQPFQQ*AYEAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
E QL + W +V P GK L +K +F K G+I +K R + +G + KG+ + P +SIR +L +AA +D + ++D A+++ ++ E+Y+ PE Y S +V RL+K+LYGL A + + L GL Q + DP ++ + ++ +V LL+ S+ K+ ++ + L CF + D+G+ +F LG I++DR+ + DQ Y+ + +F ++ + PAA P LSKD P + E ++M A PY+EAVG+L+ A+ + RPDI +A + F+ NPGPAHW A R L+Y+ T + Y GT S +++ + D+DF++ D R+SV+G ++ G++SW ++ + A +++E+EYMAL+ E +LR + L R N G + Q+G + + +HH +R+ + L++ YV + + AD LTK+L
Sbjct: 862 EYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQESG-KVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMVFVAVWVDD-LLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGME--NCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSS--EITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLA-QNGSYQSRTKHIDVRHHFLREKISEKLIKPTYVPTSDMVADSLTKSL 1339
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A8H8NTR4_9AGAM (Copia-like polyprotein/retrotransposon n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H8NTR4_9AGAM) HSP 1 Score: 230 bits (586), Expect = 3.580e-62 Identity = 152/482 (31.54%), Postives = 245/482 (50.83%), Query Frame = 1
Query: 7 EMDGQLAHQVWGVVPRPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVK--KTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLLD--AADRRQEHN*GR*RRSYQDGDQPFQQ*AY-EAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
E+D H+VW RP GK ++G ++ K G DG I YK R +A+G+ + GI Y P + + R++L + + + +L +LD+ A++ N+ E+Y+E PE + + S+ V RL KALYGL A L G G +C++D VF + N+ + LL A + E+ + LR F + DLG+ + ++G I +DR+ GTL Q Y+ + ++F + K+ TP A D P+ ++ T + T Y+ VG+LM A TRPDI +A L NPG HW A R L+YL TK VGI Y G+ L +VDADF+ ++ RS +G + GG ++W SR + + +S+E+EY+A + EL ++RQ G ++ + D H + + Q + ++H +R+ + + +++ YV + EQ AD+LTK L
Sbjct: 1899 EIDSITKHRVWMATQRPSGKNIVGCMWVYSYKLGPDGEIVRYKARLVAKGYSQQPGIDYSEISSPVAASDAFRILLALTTLGNLELLQLDIKTAFLHGNLDEEIYMEQPEGFDDGSENVWRLVKALYGLKQAARAFYLRLKEVLEGIGFTRCESDYAVFIKQDENNLAIILAHVDDMLL-AGKPLTYLEEIKSKLRESFELVDLGEAKMFVGVEIERDRNEGTLKISQKQYINDILTRFGMSDCKSCETPMAESL------DLPKLDSPT--IDRTHYQRLVGSLMYAMISTRPDIAFATGLLAQHAANPGDEHWLAGKRVLRYLQGTKSVGIIYRGSE--VKDLEGYVDADFAGDKNSSRSTTGWVFRIAGGCVAWSSRKQSTISLSSTEAEYVAASSAARELIWIRQFLGEINHRSNDATILHTDNQSSMALARNPSNHQNTKHIRIKYHFIREMIFLRELELRYVPTDEQIADMLTKPL 2369
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR) HSP 1 Score: 220 bits (560), Expect = 3.950e-62 Identity = 131/403 (32.51%), Postives = 219/403 (54.34%), Query Frame = 1
Query: 1 KSEMDGQLAHQVWGVVPRPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSD--QVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVKKTST--TPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAE 1197
+SEM+ ++VW +V KG +G K ++++K G DG+++TYK R +A+G+R+ +GI Y P SIR++L IAA D+++ ++DV A++ +K E+Y+ PE + + SD +V +LQ+++YGL A + F+ + +C+ +P V++++ +++ LL ++ + + L F +KDLG+ + LG I +DR L Q Y+ T+ ++ ++K+ P G LS+++ P+T E E M PY AVGA+M T TRPD+ YA + NPG HW+ L+YL RTK + YG + S L + DA F++ D +S+SG L GGAISW S + A +++E+EY+A +E
Sbjct: 113 ESEMESMKINKVWTLVEASKGIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYGLKQASRSWNIRFNNTIEKFNFVKCEEEPCVYKKISGSSIIFLVLYVDDILLFGNDIPSMQSTKVW-LSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGVS-LSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSELS---LKGYTDASFASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAEYIAASE 510
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Match: A0A8H7LJZ0_9AGAM (Gag-polypeptide of LTR copia-type n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H7LJZ0_9AGAM) HSP 1 Score: 224 bits (572), Expect = 4.570e-62 Identity = 152/482 (31.54%), Postives = 243/482 (50.41%), Query Frame = 1
Query: 7 EMDGQLAHQVWGVVPRPKGKTVLGTKTIFERKNGKDGRIKTYKCRFMAQGFRKIKGIRYPLR*LPTTSQASIRMMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQKALYGLVHAGLLRSKSFSAELAGKGLEQCQTDPFVFRQVLRENVVVXXXXXXXXLLVASETKRDEEQAINDLRSCFPIKDLGKTEFYLGCHITQDRDAGTLNFDQPHYVRTMASKFRVK--KTSTTPAAAGAKPLSKDDAPQTEAETEEMRATPYREAVGALMGAATMTRPDITYAAHQLETFDDNPGPAHWRAATRALQYLWRTKGVGITYGGTSGSCTKLSAWVDADFSTYPDTRRSVSGGEVMLGGGAISWFSRMRKVAATASSESEYMALAEVVNELRFLRQVKGLLD--AADRRQEHN*GR*RRSYQDGDQPFQQ*AY-EAQHHIVRDAVVIGLVQIHYVKSGEQHADVLTKAL 1437
E++ H+VW R GK ++G ++ K G DG I YK R +A+G+ + GI Y P + + R++L + + + +L +LD+ A++ N+ E+Y+E PE + + S+ V RL KALYGL A L G G +C++D VF + N+ + LL A + E+ + LR F + DLG+ + ++G I +DR+ GTL Q Y+ + ++F + K+ TP A L K D+P + T Y+ VG+LM A TRPDI +A L NPG HW A R L+YL TK VGI Y G+ L +VDADF+ ++ RS +G + GG ++W SR + + +S+E+EY+A + EL ++RQ G ++ + D H + + Q + ++H +R+ + + +++ YV + EQ ADVLTK L
Sbjct: 244 EINSITKHRVWMATQRLSGKNIVGCMWVYSYKLGPDGEIVRYKARLVAKGYSQQPGIDYSKISSPVAASDAFRILLALTTLGNLELLQLDIKTAFLHGNLNEEIYMEQPEGFDDGSENVWRLVKALYGLKQAARAFYLRLKEVLEGIGFTRCESDYAVFIKQDENNLAIILAHVDDMLL-AGKPLTYLEEIKSKLRESFELVDLGEAKMFVGVEIERDRNEGTLKISQKQYINDILTRFGMSNCKSCETPMAE-LLDLPKLDSPTIDR-------THYQRLVGSLMYAMISTRPDIAFATGLLAQHAANPGDEHWLAGKRVLRYLQGTKSVGIIYRGSE--VKDLEGYVDADFAGDKNSSRSTTGWVFRIAGGCVAWSSRKQSTISLSSTEAEYVAASSAARELIWIRQFLGEINHRSNDATILHTDNQSSMALARNPSNHQNTKHIRIKYHFIREMIFLRELELRYVPTDEQIADVLTKPL 714 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig657.17542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig657.17542.1 >prot_F-serratus_M_contig657.17542.1 ID=prot_F-serratus_M_contig657.17542.1|Name=mRNA_F-serratus_M_contig657.17542.1|organism=Fucus serratus male|type=polypeptide|length=350bp MMLGIAAVKDWKLRRLDVDMAYMEANVKYELYIELPEDYPNSSDQVGRLQback to top mRNA from alignment at F-serratus_M_contig657:343828..345279+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig657.17542.1 ID=mRNA_F-serratus_M_contig657.17542.1|Name=mRNA_F-serratus_M_contig657.17542.1|organism=Fucus serratus male|type=mRNA|length=1452bp|location=Sequence derived from alignment at F-serratus_M_contig657:343828..345279+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig657:343828..345279+ >mRNA_F-serratus_M_contig657.17542.1 ID=mRNA_F-serratus_M_contig657.17542.1|Name=mRNA_F-serratus_M_contig657.17542.1|organism=Fucus serratus male|type=CDS|length=2100bp|location=Sequence derived from alignment at F-serratus_M_contig657:343828..345279+ (Fucus serratus male)back to top |