mRNA_F-serratus_M_contig656.17534.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: D8LPV4_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV4_ECTSI) HSP 1 Score: 211 bits (538), Expect = 9.650e-67 Identity = 101/115 (87.83%), Postives = 107/115 (93.04%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
YNGPREAAGIVDYAT MLERSGWVPK PQLT VIDEKCGGTKICVIAALPHILDSGKAGRE YIE RGAAKKSRNPYLS++WTEGGAQPALEEATGLTFG+PA++AIS+EKK
Sbjct: 100 YNGPREAAGIVDYATGMLERSGWVPKTPQLTEKGVIDEKCGGTKICVIAALPHILDSGKAGREGYIETVRGAAKKSRNPYLSLMWTEGGAQPALEEATGLTFGYPAVIAISVEKK 214
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A6V1Q1R9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q1R9_HETAK) HSP 1 Score: 149 bits (375), Expect = 1.030e-40 Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEK 342
Y GPREA IV YA E+LE SG VP + +LTG D+ CGG +ICV+AALPHILDSGKAGRE+Y+E+ AKK R S W EG AQPA EEA GLTFGFPALVA+S EK
Sbjct: 261 YRGPREAPAIVQYALELLEASGVVPSIEELTGQRAFDDACGGKRICVLAALPHILDSGKAGREEYLERLVQVAKKVRGKPFSFFWFEGTAQPAAEEAYGLTFGFPALVAVSAEK 374
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: I2CQT3_NANGC (Protein disulfide-isomerase A6 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQT3_NANGC) HSP 1 Score: 131 bits (330), Expect = 1.680e-36 Identity = 62/116 (53.45%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKKV 348
Y GPREAAGI++Y + LER G P+V QL + +E+C G ICV+AALPH+LD+GK GREDY+ A+K+R + W+E GAQ A EEA GLTFGFPA+ A+S +K V
Sbjct: 7 YQGPREAAGIIEYTLDWLERHGAAPEVNQLLSPETYEEECAGPVICVLAALPHLLDTGKKGREDYLAVLMEVAQKNRKAPFRLFWSEAGAQSAAEEALGLTFGFPAVAALSKDKHV 122
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A7S2V150_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V150_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.730e-35 Identity = 67/114 (58.77%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEK 342
YNGPREA+ IV YA MLE +G P VP+LT D C G +ICV+AALPHILDSGK+GR +YIE AKK R +S+ W EGG Q LE + GLTFGFPALVA++ EK
Sbjct: 256 YNGPREASDIVQYALNMLEEAGIDPAVPELTKQKEFDSACSGKRICVLAALPHILDSGKSGRNEYIEMLINVAKKLRGKPISLFWFEGGMQVELEASFGLTFGFPALVAVNKEK 369
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A6G0X5N7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5N7_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.060e-31 Identity = 60/115 (52.17%), Postives = 78/115 (67.83%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
Y GPR+AAGIV YA LE+ G KVP++T V+++ C G ICV+A LP+I+DSG AGRE Y+++ GAAK R W +GG Q LE A LTFG+PALVAIS++K+
Sbjct: 253 YQGPRQAAGIVGYALNKLEKLGGGLKVPEITSTKVLNDHCAGKSICVVALLPNIIDSGAAGRESYLKEVDGAAKLVRGKPFRFSWVQGGDQDKLESAFDLTFGYPALVAISLDKQ 367
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A0A7CNR2_9STRA (Disulfide-isomerase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CNR2_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.760e-30 Identity = 57/115 (49.57%), Postives = 75/115 (65.22%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
Y GPR+A+GI YA + LE G KVP++T G V+ + C G ICV+A LPHI+D GKA RE Y+ + GAAK R W +GG QP LE A LTFG+P ++AI++EK+
Sbjct: 266 YQGPRQASGITAYALQKLETLGGGMKVPEITSGKVLTDHCAGKAICVLAFLPHIIDGGKAARESYLAQVEGAAKLVRGKPFRFAWVQGGDQPGLEAAFELTFGYPTVLAINLEKQ 380
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A3R7D4L0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7D4L0_9STRA) HSP 1 Score: 120 bits (302), Expect = 5.640e-30 Identity = 57/115 (49.57%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
Y GPR+A+GIV YA LE+ G KVP++T + + C G ICV+A LPHI DSG GR DY+ + GAAK R W +GG Q LE+A LTFG+PA+VAIS++K+
Sbjct: 280 YQGPRQASGIVSYALHQLEKLGGGLKVPEITSMSTMQDHCAGKSICVVAVLPHIFDSGAKGRTDYLSQVEGAAKLVRGKPFRFSWVQGGDQNKLEQAFDLTFGYPAVVAISLDKQ 394
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A067CFE8_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFE8_SAPPC) HSP 1 Score: 119 bits (297), Expect = 2.060e-29 Identity = 56/115 (48.70%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
Y GPR+A+GI YA + LE G K+P++T V+ + C G ICV+A LPHI+D GKAGRE Y+ + AAK R W +GG Q ALEEA GLTFG+P+++AI+++K+
Sbjct: 250 YQGPRQASGITAYALQKLETLGGGMKLPEVTSEKVLLDHCAGKAICVLALLPHIIDGGKAGREAYLAQVESAAKLVRGKPFRFAWVQGGNQAALEEAFGLTFGYPSVLAINLDKQ 364
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: W4G7Q2_9STRA (Protein disulfide-isomerase domain n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7Q2_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.390e-29 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
Y GPR+A+GIV YA LE+ G KVP++T + + C G ICV+A LPHI+DSG GR DY+ + GAAK R W +GG Q LE A L+FG+PA+VAIS++K+
Sbjct: 262 YQGPRQASGIVSYALNQLEKLGGGLKVPEITSTAALHDHCAGKSICVVALLPHIIDSGAKGRTDYLSQVEGAAKLVRGKPFRFSWVQGGDQSKLEHAFDLSFGYPAVVAISLDKQ 376
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Match: A0A0A7CMC1_9STRA (Disulfide-isomerase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A0A7CMC1_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.100e-28 Identity = 52/115 (45.22%), Postives = 77/115 (66.96%), Query Frame = 1
Query: 1 YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAALPHILDSGKAGREDYIEKARGAAKKSRNPYLSVIWTEGGAQPALEEATGLTFGFPALVAISIEKK 345
Y GPR+A+GI YA + LE G K+P++T ++ + C G ICV+A LPH+++SGKAGRE Y+++ GAAK R W +GG Q A EE LTFG+P+++AI+++K+
Sbjct: 252 YQGPRQASGITAYALQKLETLGGGMKIPEITSSKILSDHCAGKAICVVAFLPHLVESGKAGREAYLDQVEGAAKLVRGKPFRFAWVQGGDQLAFEEKFELTFGYPSVLAINLDKQ 366 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig656.17534.1 >prot_F-serratus_M_contig656.17534.1 ID=prot_F-serratus_M_contig656.17534.1|Name=mRNA_F-serratus_M_contig656.17534.1|organism=Fucus serratus male|type=polypeptide|length=116bp YNGPREAAGIVDYATEMLERSGWVPKVPQLTGGDVIDEKCGGTKICVIAAback to top mRNA from alignment at F-serratus_M_contig656:419637..420607- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig656.17534.1 ID=mRNA_F-serratus_M_contig656.17534.1|Name=mRNA_F-serratus_M_contig656.17534.1|organism=Fucus serratus male|type=mRNA|length=971bp|location=Sequence derived from alignment at F-serratus_M_contig656:419637..420607- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig656:419637..420607- >mRNA_F-serratus_M_contig656.17534.1 ID=mRNA_F-serratus_M_contig656.17534.1|Name=mRNA_F-serratus_M_contig656.17534.1|organism=Fucus serratus male|type=CDS|length=696bp|location=Sequence derived from alignment at F-serratus_M_contig656:419637..420607- (Fucus serratus male)back to top |