mRNA_F-serratus_M_contig656.17530.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig656.17530.1
Unique NamemRNA_F-serratus_M_contig656.17530.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 5.560e-81
Identity = 171/318 (53.77%), Postives = 188/318 (59.12%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGC----GRVGGGFSQEELKDLFILKTGTSSDTFDKLRRRIPL----------LRLGDDAHEELSSPEFD-RHDGS----------------MSRKGWREYNGPSDIADLALRRALHRESPGFGEDCDSVRGVSASAAASGPEVTFVREVKRG 863
            VVV SNFTSALDVL  LAERN WGF RLDGGT +N RQ LVDRFNRA   DLFLFFLSA+AGGVGLNLVGANRIVL+DSDWNPATDDQAMARVWRLGQTKEV MYRL+STGTLEE+I+QRQIFKGALYDLIHD+ND  S                                 G+ G GFSQEELK+LF+LK  T SDT+DKLRR              +R G    E     E   R DG                 +  + W +Y GPS + D ALR AL  E+ G                     VTFVREVKRG
Sbjct:  748 VVVASNFTSALDVLETLAERNSWGFLRLDGGTTTNERQNLVDRFNRASPEDLFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVCMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLKAETRSDTYDKLRRGRAAATPRAAGAAGVREGGRYQEVTLEREVGARGDGEEDGWQGPTAAAAPVVDVEEQAWEDYVGPSAVVDKALRLALLEEATGTPSQVGG--SXXXXXXXXXXVVTFVREVKRG 1063          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 4.160e-80
Identity = 163/292 (55.82%), Postives = 184/292 (63.01%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGC---------GRVGGGFSQEELKDLFILKTGTSSDTFDKLRR----RIPLLRLGDDAHE----ELSSPEFD---RHDG----------------SMSRKGWREYNGPSDIADLALRRALHRESPG 770
            VVV SNFTSALDVL  LAERN WGF RLDGGT +NARQ LVDRFNRA   DLFLF+LS +AGGVGLNLVGANRIVL+DSDWNPATDDQAMARVWRLGQTKEVSMYRL+STGTLEE+I+QRQIFKGALYDLIHD+ND  S                                      G+ G GFSQEELK+LF+L+T T SDT+DKLRR      P       AHE    +  +PE +   R DG                ++  + W +Y GPS + D ALR AL  E  G
Sbjct:  778 VVVASNFTSALDVLETLAERNAWGFLRLDGGTTTNARQNLVDRFNRASPEDLFLFYLSTKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLRTETRSDTYDKLRRGRAAATPTAAGAASAHEGGRYQEVTPEREAGARGDGEEDGGRGATAAAAPVVAVEEEAWEDYGGPSAVVDKALRLALLEEPTG 1069          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A7S1FQD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQD2_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.990e-45
Identity = 98/199 (49.25%), Postives = 118/199 (59.30%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKT-GTSSDTFDKL 596
            VVV+SNFTS LD+L    E   W FQRLDG T S  RQ +VD FNR  +   F F LSARAGG GLNLVGA+R+++YD DWNPATD Q MAR++R GQTK  ++YRL +TGT+EE +YQRQI KG L   + +           AS +G               S   GR    F+ EE+KD F LK     SDT  KL
Sbjct:  135 VVVSSNFTSVLDILARHLEMRGWTFQRLDGSTCSEKRQEMVDVFNRTSAEQNFCFLLSARAGGCGLNLVGASRLIMYDPDWNPATDLQTMARIYRTGQTKPTTIYRLFTTGTVEEIVYQRQIQKGNLASAVSEKT--------VASTNGG--------------SGNGGRSSSSFTAEEIKDCFDLKDEDVKSDTQRKL 311          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A2K1K7S9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7S9_PHYPA)

HSP 1 Score: 173 bits (438), Expect = 7.230e-45
Identity = 95/200 (47.50%), Postives = 125/200 (62.50%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRR 602
            VVV SNFT  LD++  +     W + RLDG T ++ RQ LVD+ N    GD+F+F LS++AGG GLNL+GANR+VL+D DWNPATD QA+AR+WR GQ K V +YRL+STG++EE IYQRQI KG +                +A+++GD     K S            +G  FS+EELK+LF L   T+ DTFD + R
Sbjct:  861 VVVVSNFTRTLDLIQDMCTSQGWNWLRLDGSTEASKRQLLVDQLNSGV-GDVFVFLLSSKAGGTGLNLIGANRLVLFDPDWNPATDSQAIARIWREGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGM----------------SAAVEGDADVHTKKSN-----------IGRHFSKEELKELFTLNLATNCDTFDLISR 1032          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A7S2W8P1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8P1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.710e-44
Identity = 93/199 (46.73%), Postives = 119/199 (59.80%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGD-LFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKL 596
            VV+ SNFT+ALD+   +A+ + W + RLDG T    RQ LVDR NR   GD LFLF LS+ AGGVGLNLVGA+R+VL+D+DWNPA D Q MARVWR GQ + V +YRL+ TGT+EE +YQRQ+ K  L   + DA  PS                                  G FSQ+EL+DL  L   ++ +TFD++
Sbjct:  594 VVLVSNFTTALDLFEAMADHHGWQYVRLDGSTPQQERQALVDRCNRRVPGDNLFLFLLSSHAGGVGLNLVGASRLVLFDTDWNPAVDKQVMARVWRNGQRRPVFIYRLLCTGTIEEKMYQRQLSKDELSCAVEDAGGPSQ---------------------------------GRFSQDELRDLLTLNASSNCETFDRM 759          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A2P6NR07_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NR07_9EUKA)

HSP 1 Score: 165 bits (418), Expect = 2.720e-42
Identity = 98/199 (49.25%), Postives = 123/199 (61.81%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSG-DLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKL 596
            +V+ SN T +LD++  L +R  W + RLDG T +++RQ LVD+FN    G D+FL  LS +AGGVGLNL+GANR+VLYDSDWNPA D QAMARVWR GQTK V +YRL+STGT+EE I+QRQI K  L + I               +DG  S ++ S                 FS+EELKD+F     T SDT D L
Sbjct:  603 IVIISNSTKSLDMISRLCDRQKWRYLRLDGSTPNHSRQKLVDQFNSKDGGHDVFL--LSTKAGGVGLNLIGANRLVLYDSDWNPAHDRQAMARVWRDGQTKTVYIYRLLSTGTIEEKIFQRQIAKTGLSNNI---------------VDGKASEKKNS-----------------FSKEELKDIFSYSQETCSDTHDLL 767          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: UPI001F03D033 (DNA repair and recombination protein RAD54-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03D033)

HSP 1 Score: 164 bits (415), Expect = 5.500e-42
Identity = 101/249 (40.56%), Postives = 133/249 (53.41%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRRRIPLLRLGDDAHEELSSPEFDRHDGSMSRKGWREYNGPSDIADLALRRA 749
            VV+ SN+T  LD+   L     + F RLDG      RQ +VDRFN    GD F+F LS++AGG GLNL+GANR+V++D DWNPA D+QAMARVWR GQ K+V +YRL+STGT+EE I+QRQ  K AL   + D  +                                  V   FS E+L+DLF L   TSSDT DK + R  + ++     +    PE    +  +S   W   N    + DLAL++A
Sbjct:  578 VVLVSNYTQTLDLFEKLCRLRRYQFVRLDGSMTIRKRQKIVDRFNDPLGGD-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKKVFIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEED---------------------------------VARHFSMEDLRDLFKLNENTSSDTHDKFKCRRCVNKI-----QVRPPPEGSSCNSDLSE--WNHCNDKKGVEDLALKKA 785          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A7S0RLR1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RLR1_9CHLO)

HSP 1 Score: 152 bits (383), Expect = 5.700e-42
Identity = 91/201 (45.27%), Postives = 111/201 (55.22%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLRRR 605
            VVV S +T  LD++    ER    + RLDG T  +AR  LV RFN+  +G +FL  LS +AGG GLNL+GANR+VL+DSDWNPA D QAMARVWR GQ K V +YRL+ TGT+EE IYQRQ+ K  + D +    D  S+  FT                                 +ELKDLF     T  DT D L RR
Sbjct:    4 VVVVSGYTRTLDMVQAACEREGASWCRLDGRTPQDARLNLVRRFNQGHAGKVFL--LSTKAGGAGLNLIGANRLVLFDSDWNPANDLQAMARVWRDGQKKAVVIYRLLCTGTIEEKIYQRQLVKTEMADCMGFGADEKSSGQFTP--------------------------------DELKDLFTYNNSTRCDTHDHLTRR 170          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A066VQ34_TILAU (Uncharacterized protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VQ34_TILAU)

HSP 1 Score: 164 bits (415), Expect = 8.240e-42
Identity = 92/199 (46.23%), Postives = 118/199 (59.30%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLR 599
            VVV SNFTS LD++  L ER  W   RLDG T +  RQ LV+ FNR+P+   F+F LSA++GGVGLNL+GANR+VL+DSDWNP+TD QAMAR+ R GQ K   +YR++  GT++E IYQRQ+ K  L D + DA   SS+                             +    FS EEL+D+F L   T S T D L+
Sbjct:  689 VVVVSNFTSTLDIIEFLCERRGWPLLRLDGKTKTETRQELVNEFNRSPASSSFVFLLSAKSGGVGLNLIGANRLVLFDSDWNPSTDKQAMARIHRDGQKKPCFIYRMLLAGTMDEKIYQRQLSKIGLSDSLMDAGTGSSS-----------------------------KASDTFSPEELRDIFTLHKDTPSLTHDLLQ 858          
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Match: A0A6A7FTU6_9CRUS (DNA repair and recombination protein RAD54B-like n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FTU6_9CRUS)

HSP 1 Score: 164 bits (414), Expect = 1.120e-41
Identity = 98/199 (49.25%), Postives = 120/199 (60.30%), Query Frame = 3
Query:    3 VVVTSNFTSALDVLVCLAERNDWGFQRLDGGTASNARQPLVDRFNRAPSGDLFLFFLSARAGGVGLNLVGANRIVLYDSDWNPATDDQAMARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSSAPNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTGTSSDTFDKLR 599
            VVV SNFTS LD+L  L +R D+ F RLDG T  + RQPLVD FN   S   F+F LS+RAGGVGLNL+GA+RI+LYD DWNPATD QAMARVWR GQT+ V +YRL+  G++EE ++QRQ+ K +L   + DA   SSA                                  FSQ+ELKDLF  +   S  T D+LR
Sbjct:  748 VVVVSNFTSTLDLLQQLCQRYDYTFLRLDGSTPQHKRQPLVDSFNSKYSKH-FVFLLSSRAGGVGLNLIGASRIILYDIDWNPATDLQAMARVWRDGQTRTVHIYRLLLCGSVEERMFQRQVHKQSLSGAVVDARQSSSAKVV-------------------------------FSQQELKDLFSNRMDGSCLTHDQLR 914          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig656.17530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTI7_9PHAE5.560e-8153.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMS0_ECTSI4.160e-8055.82SNF2-related domain-containing protein n=1 Tax=Ect... [more]
A0A7S1FQD2_9STRA5.990e-4549.25Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A2K1K7S9_PHYPA7.230e-4547.50Uncharacterized protein n=5 Tax=Physcomitrium pate... [more]
A0A7S2W8P1_9STRA9.710e-4446.73Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2P6NR07_9EUKA2.720e-4249.25Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
UPI001F03D0335.500e-4240.56DNA repair and recombination protein RAD54-like n=... [more]
A0A7S0RLR1_9CHLO5.700e-4245.27Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A066VQ34_TILAU8.240e-4246.23Uncharacterized protein n=1 Tax=Tilletiaria anomal... [more]
A0A6A7FTU6_9CRUS1.120e-4149.25DNA repair and recombination protein RAD54B-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig656contigF-serratus_M_contig656:270786..272380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score133.3
Seed ortholog evalue1.3e-28
Seed eggNOG ortholog2880.D8LMS0
Preferred nameRAD54B
KEGG koko:K06811,ko:K10779,ko:K10875,ko:K10877
KEGG Pathwayko03440,ko05226,map03440,map05226
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000280,GO:0000724,GO:0000725,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003690,GO:0003724,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0007135,GO:0007275,GO:0007568,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008340,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010259,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0030491,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033554,GO:0034641,GO:0035825,GO:0042221,GO:0042493,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045132,GO:0045144,GO:0046483,GO:0048285,GO:0048856,GO:0050896,GO:0051276,GO:0051321,GO:0051716,GO:0061982,GO:0061983,GO:0070035,GO:0070192,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1903046
EggNOG free text desc.DNA repair and recombination protein
EggNOG OGsCOG0553@1,KOG0390@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko03400,ko04516
Exons3
Model size918
Cds size618
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig656.17530.1prot_F-serratus_M_contig656.17530.1Fucus serratus malepolypeptideF-serratus_M_contig656 271732..272349 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932017.1767833-UTR-F-serratus_M_contig656:270785..2709901622932017.1767833-UTR-F-serratus_M_contig656:270785..270990Fucus serratus maleUTRF-serratus_M_contig656 270786..270990 +
1690964104.2964542-UTR-F-serratus_M_contig656:270785..2709901690964104.2964542-UTR-F-serratus_M_contig656:270785..270990Fucus serratus maleUTRF-serratus_M_contig656 270786..270990 +
1622932017.1931534-UTR-F-serratus_M_contig656:271278..2713391622932017.1931534-UTR-F-serratus_M_contig656:271278..271339Fucus serratus maleUTRF-serratus_M_contig656 271279..271339 +
1690964104.3092866-UTR-F-serratus_M_contig656:271278..2713391690964104.3092866-UTR-F-serratus_M_contig656:271278..271339Fucus serratus maleUTRF-serratus_M_contig656 271279..271339 +
1622932017.2093525-UTR-F-serratus_M_contig656:271728..2717311622932017.2093525-UTR-F-serratus_M_contig656:271728..271731Fucus serratus maleUTRF-serratus_M_contig656 271729..271731 +
1690964104.3198147-UTR-F-serratus_M_contig656:271728..2717311690964104.3198147-UTR-F-serratus_M_contig656:271728..271731Fucus serratus maleUTRF-serratus_M_contig656 271729..271731 +
1622932017.2378526-UTR-F-serratus_M_contig656:272349..2723801622932017.2378526-UTR-F-serratus_M_contig656:272349..272380Fucus serratus maleUTRF-serratus_M_contig656 272350..272380 +
1690964104.345063-UTR-F-serratus_M_contig656:272349..2723801690964104.345063-UTR-F-serratus_M_contig656:272349..272380Fucus serratus maleUTRF-serratus_M_contig656 272350..272380 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932017.224295-CDS-F-serratus_M_contig656:271731..2723491622932017.224295-CDS-F-serratus_M_contig656:271731..272349Fucus serratus maleCDSF-serratus_M_contig656 271732..272349 +
1690964104.3298616-CDS-F-serratus_M_contig656:271731..2723491690964104.3298616-CDS-F-serratus_M_contig656:271731..272349Fucus serratus maleCDSF-serratus_M_contig656 271732..272349 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig656.17530.1

>prot_F-serratus_M_contig656.17530.1 ID=prot_F-serratus_M_contig656.17530.1|Name=mRNA_F-serratus_M_contig656.17530.1|organism=Fucus serratus male|type=polypeptide|length=206bp
MARVWRLGQTKEVSMYRLVSTGTLEETIYQRQIFKGALYDLIHDANDPSS
APNFTASIDGDRSGRQKSSQKNRQMSDGCGRVGGGFSQEELKDLFILKTG
TSSDTFDKLRRRIPLLRLGDDAHEELSSPEFDRHDGSMSRKGWREYNGPS
DIADLALRRALHRESPGFGEDCDSVRGVSASAAASGPEVTFVREVKRGRV
ELVTT*
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mRNA from alignment at F-serratus_M_contig656:270786..272380+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig656.17530.1 ID=mRNA_F-serratus_M_contig656.17530.1|Name=mRNA_F-serratus_M_contig656.17530.1|organism=Fucus serratus male|type=mRNA|length=1595bp|location=Sequence derived from alignment at F-serratus_M_contig656:270786..272380+ (Fucus serratus male)
AGGTGGTCGTGACCTCCAATTTTACATCCGCCTTGGACGTCCTCGTTTGC CTCGCGGAGCGAAACGATTGGGGTTTTCAGCGGTTAGACGGTGGTACGGC CTCGAACGCCCGGCAGCCGCTGGTGGACCGATTCAACAGAGCGCCATCTG GTGACTTGTTCCTGTTTTTCCTGTCGGCGAGGGCTGGTGGCGTCGGTCTC AATCTGTAAGGTTTCGAATAACATAACAGGCAAAAATGCATGCCCATGTA GCTAGTCATGAATTAAATACCTATCCATGAGCGAAGAACTTGCCGGTTCA TGCGTGTTTGCGGCCCAAAATCATGCACACGCACCTCCTCGTATAGATTT ATCTTGCTGTTGCCTCGGTCGCAAACCGGGCGCGGTAACGCGGAAGAATG TCCAGCAGCTTTGGTAGTATCCTCAAGAGGTATCTCAGTTCGTATGGGTA GGTGACAACAGGGCTTGTCGTGTGACCCCCACTCCGTGTGCAGGGTCGGG GCCAACCGCATCGTCCTGTACGATTCGGACTGGAATCCAGCAACTGACGA TCAGGCGAGTACGAAAGCTAGAGCGAATGCTGCACCGTTGGGCACATGTT GTGGCGTTTCGCAGTCACGCATCGCTGATAAGCGAGCTTAATCATAGCCC CTATAGGTAGAGCTGGTGGAGCGACGATCGACCGTTTTTCATCTCCGTGC CTTTGGATCTTCGCACGCTCTGATGCCTAGAGAGGCTGGTGCTGTTTATT TTGCGAACCCGAACCATTCCGTTATGTTGACTTTTCCTTTGGCTACTTCG ATGTTATTGCGCGGCATTTTGGTTCGATTTCCAAGTCATGCATCGTTTGT GATTCGGGAGATTTCGAGAACTCCTCGGGACGTACCGAATCTTCCCCTAT ATATCTCCCGAAAATGTCCCGCGGCTACCCTATATCTCTCCAGGCCATGG CGCGTGTCTGGCGGCTGGGTCAAACGAAAGAGGTGTCGATGTATCGCCTC GTTAGTACGGGTACCTTGGAGGAAACGATTTATCAACGCCAAATTTTTAA GGGAGCCCTCTACGACCTCATCCACGACGCCAATGACCCGAGCTCTGCTC CTAACTTTACGGCGAGCATAGACGGCGACAGAAGCGGGAGGCAAAAATCG TCGCAAAAGAACCGACAAATGTCTGACGGGTGCGGTCGGGTGGGCGGTGG CTTCAGCCAAGAAGAACTGAAGGACCTGTTTATCCTCAAGACGGGGACCT CGAGCGATACCTTCGACAAGCTCCGGCGGAGGATCCCCCTGTTGCGCCTC GGTGATGACGCCCACGAGGAATTGAGTTCACCTGAGTTTGATCGTCACGA TGGCAGCATGAGTAGAAAAGGGTGGCGAGAGTACAACGGACCATCGGACA TTGCTGATTTGGCTCTACGGCGGGCCCTACACCGAGAATCACCGGGGTTC GGTGAAGATTGTGACAGCGTTCGAGGCGTGAGCGCTTCGGCAGCGGCGTC CGGGCCCGAGGTAACGTTCGTACGGGAGGTCAAACGCGGTAGGGTTGAGC TCGTGACAACGTGACGGGGAAACGTGGGGAGGCGCACCCCGCTGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig656:270786..272380+

>mRNA_F-serratus_M_contig656.17530.1 ID=mRNA_F-serratus_M_contig656.17530.1|Name=mRNA_F-serratus_M_contig656.17530.1|organism=Fucus serratus male|type=CDS|length=1236bp|location=Sequence derived from alignment at F-serratus_M_contig656:270786..272380+ (Fucus serratus male)
ATGGCGCGTGTCTGGCGGCTGGGTCAAACGAAAGAGGTGTCGATGTATCG
CCTCGTTAGTACGGGTACCTTGGAGGAAACGATTTATCAACGCCAAATTT
TTAAGGGAGCCCTCTACGACCTCATCCACGACGCCAATGACCCGAGCTCT
GCTCCTAACTTTACGGCGAGCATAGACGGCGACAGAAGCGGGAGGCAAAA
ATCGTCGCAAAAGAACCGACAAATGTCTGACGGGTGCGGTCGGGTGGGCG
GTGGCTTCAGCCAAGAAGAACTGAAGGACCTGTTTATCCTCAAGACGGGG
ACCTCGAGCGATACCTTCGACAAGCTCCGGCGGAGGATCCCCCTGTTGCG
CCTCGGTGATGACGCCCACGAGGAATTGAGTTCACCTGAGTTTGATCGTC
ACGATGGCAGCATGAGTAGAAAAGGGTGGCGAGAGTACAACGGACCATCG
GACATTGCTGATTTGGCTCTACGGCGGGCCCTACACCGAGAATCACCGGG
GTTCGGTGAAGATTGTGACAGCGTTCGAGGCGTGAGCGCTTCGGCAGCGG
CGTCCGGGCCCGAGGTAACGTTCGTACGGGAGGTCAAACGCGGTAGGGTT
GAGCTCGTGACAACGTGAATGGCGCGTGTCTGGCGGCTGGGTCAAACGAA
AGAGGTGTCGATGTATCGCCTCGTTAGTACGGGTACCTTGGAGGAAACGA
TTTATCAACGCCAAATTTTTAAGGGAGCCCTCTACGACCTCATCCACGAC
GCCAATGACCCGAGCTCTGCTCCTAACTTTACGGCGAGCATAGACGGCGA
CAGAAGCGGGAGGCAAAAATCGTCGCAAAAGAACCGACAAATGTCTGACG
GGTGCGGTCGGGTGGGCGGTGGCTTCAGCCAAGAAGAACTGAAGGACCTG
TTTATCCTCAAGACGGGGACCTCGAGCGATACCTTCGACAAGCTCCGGCG
GAGGATCCCCCTGTTGCGCCTCGGTGATGACGCCCACGAGGAATTGAGTT
CACCTGAGTTTGATCGTCACGATGGCAGCATGAGTAGAAAAGGGTGGCGA
GAGTACAACGGACCATCGGACATTGCTGATTTGGCTCTACGGCGGGCCCT
ACACCGAGAATCACCGGGGTTCGGTGAAGATTGTGACAGCGTTCGAGGCG
TGAGCGCTTCGGCAGCGGCGTCCGGGCCCGAGGTAACGTTCGTACGGGAG
GTCAAACGCGGTAGGGTTGAGCTCGTGACAACGTGA
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