mRNA_F-serratus_M_contig654.17518.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig654.17518.1
Unique NamemRNA_F-serratus_M_contig654.17518.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: W4GIW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIW7_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.030e-92
Identity = 176/415 (42.41%), Postives = 236/415 (56.87%), Query Frame = 1
Query:   40 KNLTNDQRNAVIAELL-RGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKK-----YNDQRSSGVLSPDMTS--GRKR------NKLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELECSA 1242
            KNLT+ +RNAV+  LL R    GK  +G    VA  FG    T  R+WK+     +   R    +S  M    GRK+       +L  +P   RTT R +A A+ +PK+TL R  K          LKP LTD  K  R+ W++  +R  L G  +F+ + D V +DEKW +       YYL  GE  P R  + K +I+KVMFL+AV RPRW   + + FDG IG W FTE   A+RSS NRPAGT+E   V V +  YK+ML+++VIP IK  WP   T  IR+QQDNA  H    D EIVAAC+ DG+DM+++ Q PNSPD NVLDLGFF +IQSLQDR  SRS  +++   +RA+   +  TL+  + T Q  + +++   G N YK+PH++    A  G  LP  +E  A
Sbjct:    3 KNLTDVERNAVLQRLLIRMQPGGKLPRGAMVDVALEFGVVRSTVRRIWKRACVDVHGGVRPCADVSSQMKGRVGRKQVHESISQRLQAIPKARRTTFRSIAAAMNVPKTTLHRYYKKGLFIKYSSVLKPSLTDANKVVRLKWSVDALRSGLDGGLRFDDMMDCVHVDEKWLFASRVRATYYLAKGEEPPHRTTKSKLHIMKVMFLSAVVRPRWDNESGSWFDGKIGTWHFTEWNPAKRSSRNRPAGTMELSAVSVTRRVYKQMLINKVIPAIKARWPKEETCKIRIQQDNARPHVSPLDAEIVAACRQDGWDMQVVFQLPNSPDLNVLDLGFFRAIQSLQDRNCSRSMVDIVDNTERAWSDVDPATLNANFLTLQGCMMEVIRCAGGNNYKIPHMKNAVLAAKGR-LPSSIEADA 416          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.160e-92
Identity = 176/411 (42.82%), Postives = 240/411 (58.39%), Query Frame = 1
Query:   43 NLTNDQRNAVIAELL-RGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSGVLSPDM------TSGRKRN------KLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELEC 1236
            NLT  +R  V  +LL   S +GK   G F R+A+ F C W T SR+WK+ N    S  L  D+       SGRK+       ++  +P  +RTT + +A  + +P ++L R  K   L     +LKP LTD  K  R+ WA +FV    G    F+ +   V IDEKWFY+    +  YL  GE  P R  Q K +I KVMFL+AVARPRW       FDG IG W FTE   AQR+S NRP+GT+ TV V V+++ Y+ MLV+ VIP IK  WP   T  I +QQDNA  H   TD  ++AAC++DG+D+ +  QPPNSPD NVLDLGFF +IQSLQ+RT  R+ +ELI     A+ + +A TL+  + T Q+ + + + + G+N YK+PH++K    + G  LP  +EC
Sbjct:    7 NLTKQERIDVSHQLLVLVSRDGKLPHGSFKRLAQRFNCSWLTISRIWKRANFCPESNTLLQDIGSRIKAASGRKKKYTDLAQRIAAIPKTDRTTLKRIASIVNMPATSLHRYFKQGLLVRHSSHLKPLLTDANKAARLKWAQKFV----GPDLVFDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQGR-LPDAIEC 412          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA)

HSP 1 Score: 293 bits (749), Expect = 2.570e-91
Identity = 179/422 (42.42%), Postives = 241/422 (57.11%), Query Frame = 1
Query:   34 SSKNLTNDQRNAVIAELLRGSTNG--KTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSG------VLSPDMTS------GRKRN------KLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELECS 1239
            S K+LT+DQR AV+  LL     G  K  +G    VA MFG    T + +WK+ N    +G      ++  D++S      GRK        ++  VP   RTT   +A A+GIP STL    K   L     ++KP LTD  K  RV WA+ FV      + +F+ + D V +DEKWF       ++YL  GE+ P R  Q K +I KVMFL AVARPRW    S  +DG IG W FTE   A RSS NRPAGT+E   + V +  YK+ML+D VIP IK  WPA S+R++ +QQDNA  H    D  +V+AC SDG+ M L  QPPNSPD NVLDLGFF +IQSLQ    S +  E++    +A+D  +  +L + + T Q  L ++++A GDN+YK+PH++K+   +SG  LP  + CS
Sbjct:   15 SMKDLTSDQRRAVVDHLLLRIVKGPCKLQRGAIQDVARMFGRNRHTIADIWKRANVSLGNGDLPARELVCEDVSSQKKGRVGRKLKYNDLPERIRAVPAAQRTTLSYVAHAIGIPVSTLKDYYKRGTLVKYNSHVKPKLTDVNKTARVKWAMDFVHPT---ELRFHDMYDYVHVDEKWFNATRVKSRFYLLPGETPPHRTTQSKRFITKVMFLTAVARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAESSRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTHHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIMAAGDNSYKVPHMKKEALKKSGK-LPESVMCS 432          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: A0A6G0WCP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCP7_9STRA)

HSP 1 Score: 286 bits (733), Expect = 4.150e-89
Identity = 178/392 (45.41%), Postives = 226/392 (57.65%), Query Frame = 1
Query:  106 KTAKGDFCRVAEMFGCYWKTASRLWKKYN-DQRSSGVLSPDMTS------GRKRNKLMIVPIKNRTTH------RGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELECSA 1242
            K   G  C VA  FG   KT SR+W++ + D     VL  D++S      GRK   L +    NRT+       R  A AL +P +TL R  K   +   R  +KP LT+  K  RV WAL  VR   GG Y  + + D+V IDEKWF++      YYL   E  P R  + K +I KVMF+AAVARPRW   T T  DG IG+WPF  +  A RSS NRPAGT+E   + VNKE YK ML+ +VI  IKE WP GSTR + +QQDNA  H  A D ++ AAC    ++M + NQPPNSPD NVLDLGFF +IQSLQ+   SR   E+I  V  A+   EA TL+  + T QA L++++  +GDN YK+PH+RK +    G  LP  L C A
Sbjct:    2 KLKPGAICDVAAKFGVTAKTISRIWRRADIDVNCGRVLCSDVSSRRTGNVGRKLKWLDVAGRINRTSFNRRTSLRKTAKALQMPYTTLQRYFKRGVVVKYRSNVKPKLTEANKLARVKWALDHVRH-RGGLY-VDDMMDVVHIDEKWFFMTKLKTNYYLAPDEEPPHRTERSKQHITKVMFMAAVARPRWDEATRTWLDGKIGVWPFVIEVPAARSSRNRPAGTLELQTIPVNKETYKDMLLTKVITAIKEKWPLGSTRNVVIQQDNATPHVAAFDDDVSAACTDGEWNMIVRNQPPNSPDMNVLDLGFFRAIQSLQENCHSRYMMEIIDAVNSAWRDVEARTLNNNFLTLQACLQEVLKIEGDNKYKIPHMRKSSLLACGM-LPGVLPCDA 390          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: UPI000CD9DCB3 (uncharacterized protein LOC111916103 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9DCB3)

HSP 1 Score: 284 bits (726), Expect = 1.780e-88
Identity = 162/412 (39.32%), Postives = 244/412 (59.22%), Query Frame = 1
Query:   40 KNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSGV-----LSPDMTSGRKR-----NKLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVR--EVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCV-EVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELEC 1236
            KN T  QR A+   LL+ S +G+  KG    VA +F    +T SR+W +  +Q   G+      +  M  G+KR     N++  +P+++R+  R LA +L + KSTL R +K   L+     +KP LT E +R R+++ L  +    +      F+ + ++V IDEKWFY+    ++YYL  G+  P+R  + K +I K+MFLAAVARPR+ ++ +  F G IGI+PFT    A+RSS NR AGT+ET  +  VNKE  +  L+++V+P I+  WP G T  I +QQDNA  H    D E + A   DGFD+ L  QPPNSPD NVLDLGFF +IQSLQ++    + +EL+  V+ +F+  ++  L+ V+ T Q  +++I+  +G N Y +PH+ K    R G  LP+++EC
Sbjct:   11 KNTTIAQRQAIFQSLLQESFDGRLKKGSVSEVASLFSVSKRTVSRIWHQGKNQVDHGLPVDFSSNMPMVVGQKRVQINLNQVSEIPLRHRSNIRSLAKSLNVSKSTLHRRIKEGVLRPHTNVIKPTLTHENRRARLEYCLSKITLSSLFSPIPTFHDMFNVVHIDEKWFYMSKPSKRYYLVPGDDEPLRTCKSKKFITKIMFLAAVARPRYDSSGNEVFSGKIGIYPFTTLEPAKRSSKNRVAGTMETKPILSVNKEVTRSWLIEKVLPDIRAKWPRGHTGPIFIQQDNAKPHIDVDDSEFLEAASRDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEALSTTDELVNAVQTSFERMQSQQLNNVFLTLQTCMKEIIKVQGGNNYHIPHIGKSRLDRQGN-LPLQIEC 421          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: A0A6A4ZBD2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZBD2_9STRA)

HSP 1 Score: 283 bits (724), Expect = 6.530e-88
Identity = 171/406 (42.12%), Postives = 240/406 (59.11%), Query Frame = 1
Query:   22 AQTKSSKNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSGVLSPDM------TSGRKRNKLM--------IVPIKNRTTHRGLAVALGIPKSTLARNLKALG-LKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEVNKERYKRMLVDQVIPKIKEVWPAGS-TRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKD 1191
            A   S+ +LT  +R A    LL+ STNG+   G    VA  F C+WKT SR+WK+     S G    D+       SGRK+++L          VP   R T R LA   G+PK+++ R+++    LK+   Y+KP LT++  + R+D+A  FVR +  G + F  + + V +DEKWFYL    +K+Y+YD E + +R V+ K +I KVMFLAAVARP++  T +  FDG +G+WPF     A+R+S NR  G    V   V+ + YK+ ++D+VIP I E +P  +  R + +QQDNA  HR  T  E++A    +   +E  NQPPNSPD NVLDLGFFNSIQSLQ + ++RS  ELI  V+ AF     DTLSK + T Q V++  +   G N YK+PH+RKD
Sbjct:    4 ASPSSTCHLTPTERRAAYELLLQSSTNGRLKYGALKEVATYFKCHWKTISRVWKRGRLSLSDGSPHADVDSKLKGNSGRKKSRLADDFEGAIKAVPQHQRQTLRSLAAHCGLPKTSIVRHMQETKRLKSRASYVKPMLTEDNTKARLDFAKSFVRLLPSGNHAFVDMNEYVHVDEKWFYLTRVKRKFYVYDDEEVALRAVKSKQFITKVMFLAAVARPQYDHTRNAYFDGKVGVWPFVVVEPAKRNSKNRAKGAPVVVPQVVDGKVYKKAIIDKVIPAILERFPPRTLARGVVIQQDNASPHRCVTT-EVLAQRGLEKIRVE--NQPPNSPDFNVLDLGFFNSIQSLQHQKSTRSIEELIGAVEAAFYELPMDTLSKTFITLQKVMQTSIEMLGSNNYKLPHMRKD 406          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 283 bits (723), Expect = 1.090e-87
Identity = 162/397 (40.81%), Postives = 236/397 (59.45%), Query Frame = 1
Query:   40 KNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSS-GVLSP-DMTSGR-----------KRNKLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKD 1191
            + LT+DQR+AV   LL+   NG+   G+   + + F    +T SR+W++  +  +S GV        GR            R+ +   P   R  +R +A A G+PK+ L R +KA  L      L+P LT + +  R ++A  F+R+   G+ +++ + D V IDEKWFY+    +++YL+  E  P R+ Q K +I KVMFL AVARPR  +     +DG +G+WPF E ++A+R S NR  GT  TV + V K  Y+R LVD+VIP I+  WP     TI VQQDNA  H    DPE++AA + +G++++L+ QP  SPD NVLDLGFFN+IQSLQ +TT+R+ ++LI  V+ AF+      L K + T Q V+E+ M + GDN YK+PHL+KD
Sbjct:    8 RELTDDQRSAVYHRLLQLKRNGRVGHGEMKNLMQSFNISQQTISRIWRRGCETAASLGVAKVGSQKKGRCGRPRKYKDEDVRSAVTSAPAHLRGNYRTMAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFIRDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKD 404          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: UPI001C256EBA (uncharacterized protein LOC121779336 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C256EBA)

HSP 1 Score: 282 bits (722), Expect = 1.130e-87
Identity = 164/417 (39.33%), Postives = 238/417 (57.07%), Query Frame = 1
Query:   19 VAQTKSSKNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSGVLSPDM--TSGRKRN--------KLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVR-EVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVE-VNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELE 1233
            +A+ + ++ LT + +N ++  LL+ S  G   KG  C  AE F    KT SRLWK   +   +G  +  +    G KR         K+  + +  R+++R +A  LG+ K+T+ R +K   L+     +KP LTD  K  R+ W L  ++  ++     FN + ++V IDEKWFYL     +YYL   E  P R  + K +I KVMFL AV RP +     T FDG +GI+PFTE   AQR+S NRP GT+ET  +  V +   +  L++++IP I   WP  +++ I +QQDNA  H   TDPE   A  S+GF ++LI QPPNSPD N+LDLGFF +IQSL+D+    + +EL+  V  A++     TL+KV+ T Q+VL +I+  +G N YK+PH+ KD   R G  LP  LE
Sbjct:    1 MAEQRVNQYLTTNMKNNIVQHLLKNSQGGVLRKGAVCEAAEAFAVNRKTISRLWKAATEMMENGEPAHMVGKVKGYKRGEKKKVDEVKVRSLSVLERSSYRVMAPKLGVSKTTICRWVKDKQLRPHTSAIKPHLTDLNKLARLKWCLSQLQPNIIARTVAFNEMRNVVHIDEKWFYLTKSADRYYLLPDEEEPQRSCRSKRFITKVMFLCAVGRPHFGPNGETLFDGKLGIFPFTEMVPAQRNSKNRPRGTLETKPIPAVTQAVTREWLINKIIPAIHSKWPTSASKEIYIQQDNAKPHISTTDPEFEEAANSNGFKIQLICQPPNSPDTNILDLGFFRAIQSLKDKKACSNVDELLQNVSMAYEELTPQTLNKVFLTLQSVLSEILEVQGGNNYKIPHMNKDRLERIGA-LPNVLE 416          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3)

HSP 1 Score: 281 bits (718), Expect = 2.730e-87
Identity = 166/415 (40.00%), Postives = 243/415 (58.55%), Query Frame = 1
Query:   28 TKSSKNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSG---VLSPDMTS--GRKR-----NKLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVLGGKYK-FNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCV-EVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELEC 1236
            T + KN T +QR+A+   LL+ S +G+  +G    VA  F    +T SR+W +   Q + G   VLS +M    GRKR     N+++ +P++ R+  R LA  L + KST+ R +K   L+     +KP LT E KR R+++ L  +   L      F+ + +++ IDEKWFY+    ++YYL  GE  P+R  Q K +I KVMFLAAVARPR+ A+ +  F G IGI+PFT    A+RSS NR AGT+ET  +  V KE  +  L+++V+P I+  WP      I +QQDNA  H    D E + A   DGFD+ L  QP NSPD NVLDLGFF +IQSLQ++    + +EL+  V+ AF+  ++  L+ V+ T Q  + +I+  +G N Y++PH+ K+   R G  LP+ + C
Sbjct:    7 THTKKNTTVEQRHAIYEALLQASFSGELQRGAISDVASQFSVSNRTVSRIWHQAKFQINHGLPVVLSSNMAKVVGRKRVQVDFNQVLDIPLRRRSNIRSLANLLNVSKSTMHRRIKEGALRPHTNAIKPTLTHENKRARLEFCLSKISRSLSSNIPTFHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGN-LPLRIGC 420          
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Match: UPI00073A4D58 (uncharacterized protein LOC107061740 n=4 Tax=Solanum tuberosum TaxID=4113 RepID=UPI00073A4D58)

HSP 1 Score: 284 bits (726), Expect = 2.840e-87
Identity = 167/410 (40.73%), Postives = 242/410 (59.02%), Query Frame = 1
Query:   40 KNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFGCYWKTASRLWKKYNDQRSSGVLSPDMTS-GRKR-----NKLMIVPIKNRTTHRGLAVALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFV-REVLGGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVKVMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETVCVEV-NKERYKRMLVDQVIPKIKEVWPAG-STRTIRVQQDNAPSHRIATDPEIVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNELITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAARSGTPLPMELECSA 1242
            + L+ND+R A+   LL  S NGK  +G    VA  F    +T  R+WK+      + V      + GRKR     N+   +P++ RTT R LA +L + KSTL R LK   ++     +KPFLT++ K  R+ + L  V R+ +     F  + ++V IDEKWFY+    Q YY+  GE   +R  +  +YI+K+MFL A+ARPR  A  +  F G IGIWPF  Q  AQR S+NRPAGT+ET  + V N++  +  L+D+VIP IKE WP G ST  I +QQDNA +H    D E       DGFD+ L+ QPPNSPD NVLDLGFF++IQ+LQ +   ++ +ELI+ V  A++       ++++ T Q+ +++IM   G N Y +PH++K+   R+G  LP+ L+C +
Sbjct:  111 RELSNDKRIALYEMLLAKSVNGKLGQGVRKMVASHFSVSLRTVYRIWKQSGYGTQNDVSRRKAKNCGRKRIEIDMNRFREIPLRKRTTLRTLACSLDVNKSTLGRRLKGKEIQRHSNTIKPFLTEQNKISRLQFCLSMVDRDSIPDDPSFIDMYNIVHIDEKWFYMTKKKQTYYMLPGEEEQLRSCKSSNYILKIMFLVALARPRIDALGNVLFCGKIGIWPFVIQEEAQRGSVNRPAGTLETKPISVVNRDVIRSFLIDKVIPSIKEKWPIGDSTHPIYIQQDNARTHVKINDDEFRQVASQDGFDIRLMCQPPNSPDMNVLDLGFFSAIQALQHQEAPKNIDELISVVTNAYEVFSERMSNRIFLTLQSCMKEIMRIGGFNKYNIPHIKKEILQRTGQ-LPISLKCDS 519          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig654.17518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GIW7_9STRA1.030e-9242.41Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485KBU5_9STRA1.160e-9242.82Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
A0A6A4Z322_9STRA2.570e-9142.42Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0WCP7_9STRA4.150e-8945.41Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI000CD9DCB31.780e-8839.32uncharacterized protein LOC111916103 n=1 Tax=Lactu... [more]
A0A6A4ZBD2_9STRA6.530e-8842.12Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A6A5AA16_9STRA1.090e-8740.81Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
UPI001C256EBA1.130e-8739.33uncharacterized protein LOC121779336 n=3 Tax=Salvi... [more]
UPI000CD873B32.730e-8740.00uncharacterized protein LOC111883545 n=1 Tax=Lactu... [more]
UPI00073A4D582.840e-8740.73uncharacterized protein LOC107061740 n=4 Tax=Solan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig654contigF-serratus_M_contig654:258512..259789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score273.9
Seed ortholog evalue1.3e-70
Seed eggNOG ortholog38727.Pavir.Eb00546.1.p
Hectar predicted targeting categoryother localisation
EggNOG OGs2CMKC@1,2QQNW@2759,37TMG@33090,3GG9M@35493,3IN2T@38820,3M2XW@4447
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons2
Model size1242
Cds size1242
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932013.9084017-CDS-F-serratus_M_contig654:258511..2595061622932013.9084017-CDS-F-serratus_M_contig654:258511..259506Fucus serratus maleCDSF-serratus_M_contig654 258512..259506 -
1690964102.7820709-CDS-F-serratus_M_contig654:258511..2595061690964102.7820709-CDS-F-serratus_M_contig654:258511..259506Fucus serratus maleCDSF-serratus_M_contig654 258512..259506 -
1622932013.925104-CDS-F-serratus_M_contig654:259542..2597891622932013.925104-CDS-F-serratus_M_contig654:259542..259789Fucus serratus maleCDSF-serratus_M_contig654 259543..259789 -
1690964102.79977-CDS-F-serratus_M_contig654:259542..2597891690964102.79977-CDS-F-serratus_M_contig654:259542..259789Fucus serratus maleCDSF-serratus_M_contig654 259543..259789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig654.17518.1prot_F-serratus_M_contig654.17518.1Fucus serratus malepolypeptideF-serratus_M_contig654 258512..259789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig654.17518.1

>prot_F-serratus_M_contig654.17518.1 ID=prot_F-serratus_M_contig654.17518.1|Name=mRNA_F-serratus_M_contig654.17518.1|organism=Fucus serratus male|type=polypeptide|length=414bp
MSSAPAVAQTKSSKNLTNDQRNAVIAELLRGSTNGKTAKGDFCRVAEMFG
CYWKTASRLWKKYNDQRSSGVLSPDMTSGRKRNKLMIVPIKNRTTHRGLA
VALGIPKSTLARNLKALGLKACRQYLKPFLTDEGKRKRVDWALRFVREVL
GGKYKFNPLTDMVCIDEKWFYLCAHGQKYYLYDGESMPVRRVQHKSYIVK
VMFLAAVARPRWVATTSTQFDGLIGIWPFTEQRMAQRSSINRPAGTVETV
CVEVNKERYKRMLVDQVIPKIKEVWPAGSTRTIRVQQDNAPSHRIATDPE
IVAACQSDGFDMELINQPPNSPDCNVLDLGFFNSIQSLQDRTTSRSKNEL
ITEVKRAFDAQEADTLSKVWTTQQAVLEQIMLAKGDNAYKMPHLRKDTAA
RSGTPLPMELECSA
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mRNA from alignment at F-serratus_M_contig654:258512..259789-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig654.17518.1 ID=mRNA_F-serratus_M_contig654.17518.1|Name=mRNA_F-serratus_M_contig654.17518.1|organism=Fucus serratus male|type=mRNA|length=1278bp|location=Sequence derived from alignment at F-serratus_M_contig654:258512..259789- (Fucus serratus male)
ATGTCGAGCGCTCCAGCGGTGGCCCAAACAAAGAGCAGCAAGAACCTAAC CAATGATCAGCGAAATGCTGTCATTGCAGAGCTGCTTCGAGGCAGCACCA ACGGCAAGACTGCAAAGGGTGACTTCTGTCGGGTGGCAGAGATGTTCGGG TGCTACTGGAAGACCGCTTCACGCCTGTGGAAGAAGTACAATGACCAGAG GAGCAGCGGCGTGCTCTCGCCAGACATGACAAGCGGTCGCAAGCGAAGTG GCCGGAAGGGCATCGACATCTAGACCCTCCGAGACAAGTTGATGATAGTC CCGATCAAGAACCGCACGACACACCGGGGGCTCGCGGTTGCATTGGGCAT CCCGAAGTCTACGCTGGCAAGGAACCTGAAGGCGCTCGGCCTCAAAGCTT GCCGACAGTACCTGAAGCCGTTTCTTACTGACGAAGGCAAGCGGAAGCGA GTGGACTGGGCGTTGCGCTTCGTCCGTGAGGTTCTTGGGGGTAAGTACAA GTTCAACCCCCTGACCGACATGGTGTGCATAGACGAGAAGTGGTTCTATC TGTGCGCTCACGGGCAGAAGTACTACCTGTACGATGGAGAGTCAATGCCC GTCCGCCGGGTACAGCACAAATCCTATATCGTCAAGGTGATGTTCCTTGC TGCTGTCGCTCGTCCTCGGTGGGTTGCCACCACCAGCACTCAGTTCGACG GTCTGATCGGTATCTGGCCGTTCACGGAGCAGCGCATGGCTCAGCGCAGC AGCATCAACAGGCCGGCGGGCACCGTGGAGACCGTCTGCGTAGAGGTCAA CAAGGAACGCTACAAGCGGATGCTCGTGGACCAAGTGATCCCCAAGATCA AGGAGGTGTGGCCTGCAGGGTCAACCCGAACCATTCGTGTCCAGCAGGAC AACGCTCCATCTCACCGCATCGCCACGGATCCGGAGATTGTGGCGGCATG CCAGTCAGACGGTTTCGACATGGAGCTCATCAACCAGCCTCCCAACAGCC CCGACTGCAACGTCCTCGATCTCGGGTTTTTTAACTCGATACAGTCCCTT CAGGACCGCACCACCTCGAGGTCGAAGAATGAACTCATCACCGAGGTCAA GAGGGCCTTCGACGCCCAAGAAGCTGACACGCTGTCGAAGGTGTGGACGA CCCAGCAGGCCGTCCTGGAGCAGATCATGCTGGCGAAGGGTGATAACGCT TACAAGATGCCTCACTTGAGGAAGGATACGGCGGCGCGCAGCGGAACGCC GCTACCGATGGAGCTGGAGTGCAGTGCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig654:258512..259789-

>mRNA_F-serratus_M_contig654.17518.1 ID=mRNA_F-serratus_M_contig654.17518.1|Name=mRNA_F-serratus_M_contig654.17518.1|organism=Fucus serratus male|type=CDS|length=2484bp|location=Sequence derived from alignment at F-serratus_M_contig654:258512..259789- (Fucus serratus male)
ATGTCGAGCGCTCCAGCGGTGGCCCAAACAAAGAGCAGCAAGAACCTAAC
CAATGATCAGCGAAATGCTGTCATTGCAGAGCTGCTTCGAGGCAGCACCA
ACGGCAAGACTGCAAAGGGTGACTTCTGTCGGGTGGCAGAGATGTTCGGG
TGCTACTGGAAGACCGCTTCACGCCTGTGGAAGAAGTACAATGACCAGAG
GAGCAGCGGCGTGCTCTCGCCAGACATGACAAGCGGTCGCAAGCGAAATG
TCGAGCGCTCCAGCGGTGGCCCAAACAAAGAGCAGCAAGAACCTAACCAA
TGATCAGCGAAATGCTGTCATTGCAGAGCTGCTTCGAGGCAGCACCAACG
GCAAGACTGCAAAGGGTGACTTCTGTCGGGTGGCAGAGATGTTCGGGTGC
TACTGGAAGACCGCTTCACGCCTGTGGAAGAAGTACAATGACCAGAGGAG
CAGCGGCGTGCTCTCGCCAGACATGACAAGCGGTCGCAAGCGAAACAAGT
TGATGATAGTCCCGATCAAGAACCGCACGACACACCGGGGGCTCGCGGTT
GCATTGGGCATCCCGAAGTCTACGCTGGCAAGGAACCTGAAGGCGCTCGG
CCTCAAAGCTTGCCGACAGTACCTGAAGCCGTTTCTTACTGACGAAGGCA
AGCGGAAGCGAGTGGACTGGGCGTTGCGCTTCGTCCGTGAGGTTCTTGGG
GGTAAGTACAAGTTCAACCCCCTGACCGACATGGTGTGCATAGACGAGAA
GTGGTTCTATCTGTGCGCTCACGGGCAGAAGTACTACCTGTACGATGGAG
AGTCAATGCCCGTCCGCCGGGTACAGCACAAATCCTATATCGTCAAGGTG
ATGTTCCTTGCTGCTGTCGCTCGTCCTCGGTGGGTTGCCACCACCAGCAC
TCAGTTCGACGGTCTGATCGGTATCTGGCCGTTCACGGAGCAGCGCATGG
CTCAGCGCAGCAGCATCAACAGGCCGGCGGGCACCGTGGAGACCGTCTGC
GTAGAGGTCAACAAGGAACGCTACAAGCGGATGCTCGTGGACCAAGTGAT
CCCCAAGATCAAGGAGGTGTGGCCTGCAGGGTCAACCCGAACCATTCGTG
TCCAGCAGGACAACGCTCCATCTCACCGCATCGCCACGGATCCGGAGATT
GTGGCGGCATGCCAGTCAGACGGTTTCGACATGGAGCTCATCAACCAGCC
TCCCAACAGCCCCGACTGCAACGTCCTCGATCTCGGGTTTTTTAACTCGA
TACAGTCCCTTCAGGACCGCACCACCTCGAGGTCGAAGAATGAACTCATC
ACCGAGGTCAAGAGGGCCTTCGACGCCCAAGAAGCTGACACGCTGTCGAA
GGTGTGGACGACCCAGCAGGCCGTCCTGGAGCAGATCATGCTGGCGAAGG
GTGATAACGCTTACAAGATGCCTCACTTGAGGAAGGATACGGCGGCGCGC
AGCGGAACGCCGCTACCGATGGAGCTGGAGTGCAGTGCCACAAGTTGATG
ATAGTCCCGATCAAGAACCGCACGACACACCGGGGGCTCGCGGTTGCATT
GGGCATCCCGAAGTCTACGCTGGCAAGGAACCTGAAGGCGCTCGGCCTCA
AAGCTTGCCGACAGTACCTGAAGCCGTTTCTTACTGACGAAGGCAAGCGG
AAGCGAGTGGACTGGGCGTTGCGCTTCGTCCGTGAGGTTCTTGGGGGTAA
GTACAAGTTCAACCCCCTGACCGACATGGTGTGCATAGACGAGAAGTGGT
TCTATCTGTGCGCTCACGGGCAGAAGTACTACCTGTACGATGGAGAGTCA
ATGCCCGTCCGCCGGGTACAGCACAAATCCTATATCGTCAAGGTGATGTT
CCTTGCTGCTGTCGCTCGTCCTCGGTGGGTTGCCACCACCAGCACTCAGT
TCGACGGTCTGATCGGTATCTGGCCGTTCACGGAGCAGCGCATGGCTCAG
CGCAGCAGCATCAACAGGCCGGCGGGCACCGTGGAGACCGTCTGCGTAGA
GGTCAACAAGGAACGCTACAAGCGGATGCTCGTGGACCAAGTGATCCCCA
AGATCAAGGAGGTGTGGCCTGCAGGGTCAACCCGAACCATTCGTGTCCAG
CAGGACAACGCTCCATCTCACCGCATCGCCACGGATCCGGAGATTGTGGC
GGCATGCCAGTCAGACGGTTTCGACATGGAGCTCATCAACCAGCCTCCCA
ACAGCCCCGACTGCAACGTCCTCGATCTCGGGTTTTTTAACTCGATACAG
TCCCTTCAGGACCGCACCACCTCGAGGTCGAAGAATGAACTCATCACCGA
GGTCAAGAGGGCCTTCGACGCCCAAGAAGCTGACACGCTGTCGAAGGTGT
GGACGACCCAGCAGGCCGTCCTGGAGCAGATCATGCTGGCGAAGGGTGAT
AACGCTTACAAGATGCCTCACTTGAGGAAGGATACGGCGGCGCGCAGCGG
AACGCCGCTACCGATGGAGCTGGAGTGCAGTGCC
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