prot_F-serratus_M_contig6539.17517.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6539.17517.1
Unique Nameprot_F-serratus_M_contig6539.17517.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length106
Homology
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A0P1ACE6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACE6_PLAHL)

HSP 1 Score: 57.0 bits (136), Expect = 3.030e-7
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   13 WESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKAVE 95
            W  DSG T H++H     S    AS G SI V   N +P++G GKIE+E+   + T +M+ + DV Y P L  +L+S   AV+
Sbjct:  229 WTIDSGCTRHVTHESQWFSTIS-ASNG-SITVGVKNQIPIEGIGKIELEVTDSKGTQRMLTLHDVLYAPELKFSLLSVPAAVK 309          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A6A3YSJ5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YSJ5_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.890e-6
Identity = 27/76 (35.53%), Postives = 42/76 (55.26%), Query Frame = 0
Query:   13 WESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLM 88
            W  DSG T H++H     SN   +  G SI V   N +P++G G++E+E+   +R  K + + DV Y P L  +L+
Sbjct:  129 WTIDSGCTRHVTHEAQWFSNISAS--GGSITVGGKNQIPIEGIGRVELEVIDSKRNMKKLILHDVLYAPQLHFSLL 202          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A4C1TCT1_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1TCT1_EUMVA)

HSP 1 Score: 53.5 bits (127), Expect = 5.280e-6
Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 0
Query:   12 EWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKA 93
            +W  D+GAT H++ TR     Y+  +   SI+ A    L  +G G IE      +     +R++DV YVPG+SRNL S + A
Sbjct:  295 DWWVDNGATKHVTRTRKYFVEYESFNDQKSIQAAGKEILNAEGKGTIEFLSRINQNLEIQIRLEDVWYVPGISRNLFSVLAA 376          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A4C1SBF3_EUMVA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Eumeta variegata TaxID=151549 RepID=A0A4C1SBF3_EUMVA)

HSP 1 Score: 53.5 bits (127), Expect = 5.660e-6
Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 0
Query:   12 EWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKA 93
            +W  D+GAT H++ TR     Y+  +   SI+ A    L  +G G IE      +     +R++DV YVPG+SRNL S + A
Sbjct:  268 DWWVDNGATKHVTRTRKYFVEYESFNDQKSIQAAGKEILNAEGKGTIEFLSRINQNLEIQIRLEDVWYVPGISRNLFSVLAA 349          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A225UU99_9STRA (Pol Polyprotein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UU99_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 9.860e-6
Identity = 27/83 (32.53%), Postives = 45/83 (54.22%), Query Frame = 0
Query:   13 WESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKAVE 95
            W  DSG T H+SH     ++   +  G SI V   N +P++G G++E+E+   + T + + +  V Y P L  +L+S   AV+
Sbjct:  205 WTIDSGCTRHVSHESQWFTDITTS--GGSITVGGNNQIPIEGIGRVELEVSDSKGTMQKLILHGVLYAPQLQFSLLSVPAAVK 285          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A2P4XU07_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU07_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.610e-5
Identity = 27/83 (32.53%), Postives = 45/83 (54.22%), Query Frame = 0
Query:   13 WESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKAVE 95
            W  D G T H++H     S+   A+ G SI V   N +P++G G++E+E+   + T + + +  V Y P L  +L+S   AV+
Sbjct:  153 WTIDPGCTRHVTHESQWFSDI--AASGGSITVGGNNQIPIEGIGRVELEVSDSKGTMQNLILHGVLYAPQLQFSLLSVPAAVK 233          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A6A4DDX6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4DDX6_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.920e-5
Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 0
Query:   13 WESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKAVE 95
            W  DSG T H++H     SN   +  G SI V   N +P++G G++E+E+   +   K + +  V Y P L  +L+S   AV+
Sbjct:  138 WTIDSGCTRHVTHEAQWFSNISAS--GGSITVGGKNQIPIEGIGRVELEVIDYKGNMKKLILHGVLYAPQLHFSLLSLSAAVK 218          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A6L2NS58_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NS58_TANCI)

HSP 1 Score: 51.2 bits (121), Expect = 3.350e-5
Identity = 28/82 (34.15%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    8 DEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMS 89
            DE  E   +SG ++HM+H R  + ++K    G S+++ D  T  + G GK+ ++L           ++DV+YVPGL R+L+S
Sbjct:  136 DEMTELVMNSGESYHMTHMRDFLYDFKVVDGG-SVRLGDNRTCTIKGTGKVNIQL----HNGSSFILEDVSYVPGLRRSLIS 212          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A699TK29_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699TK29_TANCI)

HSP 1 Score: 50.4 bits (119), Expect = 4.070e-5
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    8 DEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMS 89
            DE  E   DSG ++HM+H R  + ++K    G S+++ D  T  + G GK++++L           ++D  YVPGL R+L+S
Sbjct:  119 DEMTELVMDSGGSYHMTHKRDFLYDFKVVDGG-SVRLGDNRTCTIKGTGKVKIQL----YNGSSFILEDFRYVPGLRRSLIS 195          
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Match: A0A699KJT9_TANCI (Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699KJT9_TANCI)

HSP 1 Score: 50.8 bits (120), Expect = 4.400e-5
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0
Query:    8 DEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMS 89
            DE  E   +SG ++HM+H R  + ++K    G S+++ D  T  + G GK+ ++L           + DV+YVPGL R+L+S
Sbjct:  118 DEMTELVMNSGGSYHMTHRRDFLYDFKVVDGG-SVRLGDNRTCTIKGTGKVNIQL----HNGSSFILKDVSYVPGLKRSLIS 194          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6539.17517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A0P1ACE6_PLAHL3.030e-739.76Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A6A3YSJ5_9STRA1.890e-635.53Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A4C1TCT1_EUMVA5.280e-636.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A4C1SBF3_EUMVA5.660e-636.59Retrovirus-related Pol polyprotein from transposon... [more]
A0A225UU99_9STRA9.860e-632.53Pol Polyprotein (Fragment) n=1 Tax=Phytophthora me... [more]
A0A2P4XU07_9STRA1.610e-532.53Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A4DDX6_9STRA2.920e-533.73Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
A0A6L2NS58_TANCI3.350e-534.15Retrovirus-related Pol polyprotein from transposon... [more]
A0A699TK29_TANCI4.070e-534.15Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetu... [more]
A0A699KJT9_TANCI4.400e-534.15Zinc finger, CCHC-type (Fragment) n=1 Tax=Tanacetu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6539contigF-serratus_M_contig6539:2411..2728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6539.17517.1mRNA_F-serratus_M_contig6539.17517.1Fucus serratus malemRNAF-serratus_M_contig6539 2411..2728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6539.17517.1 ID=prot_F-serratus_M_contig6539.17517.1|Name=mRNA_F-serratus_M_contig6539.17517.1|organism=Fucus serratus male|type=polypeptide|length=106bp
MVGTARSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTL
PVDGFGKIEVELDQPRRTTKMVRMDDVAYVPGLSRNLMSTVKAVEQWGKP
LVYYRN
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