prot_F-serratus_M_contig6534.17514.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6534.17514.1
Unique Nameprot_F-serratus_M_contig6534.17514.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length445
Homology
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 520 bits (1340), Expect = 1.890e-179
Identity = 261/418 (62.44%), Postives = 310/418 (74.16%), Query Frame = 0
Query:   29 EDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAP-DASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            E  GC T+T+LY  R+ESDG + KGPI+ LDD+ + + +P  ++ KWLLT++L +  G++FYCRG+ IGGDCDELRIQSTG TDFHEVR HGGS+YFE+T+VTSWDTPNK+P   Y  GRSF+NCVSE  + E C GQ QN+ GECRMDII SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYG QGGVW NN+MHDNHQYGFDPHDDSDYLT                               +GG  A GIFLHRSSD   V+DNVVHDMQDAGMA++ES +ADI++N F++VK+GIR+SLG   N+V++N+F+  S  GLYTYQGSD P D  SDGRPSDN F +N I N   G+KI E DDTVIT N FTGTS  EF DAQ+T W  N
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGN 487          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 520 bits (1338), Expect = 3.260e-174
Identity = 254/436 (58.26%), Postives = 309/436 (70.87%), Query Frame = 0
Query:   11 KSSTRWASGTGLNGRIYLEDGGCGTMTNLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            + S R+A+ +G+ GR+Y E  GC TMT+LY  R  E+DG + KGP+Y+LDD+   +  PS +T  WLL ++L++  G +FYC+GT  GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YENGRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLTIA                             +GG+ A GIFLHRSSD   V+DN + +MQDAG+A++ESFDA I+ N     KYGIR+SLG GNN VY N F   S+YGLYTY+GSD PD S DGRPS N    N + +   G+KI E DD     NTF     FEF ++ +T+WS N
Sbjct:  427 RPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN 860          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 5.310e-165
Identity = 244/427 (57.14%), Postives = 300/427 (70.26%), Query Frame = 0
Query:   29 EDGGCGTMTNLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            E  GC T+T+LY  R  E+DG + KGP+Y+LD +   + +P+SVT KWLL ++L+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE  + ETC+G  +ND GECRMDII SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYG QGGVWTNN+MHDNHQY            +A                             +GG  AVGIFLHRSSD+ EVY N + +M DAG+A++ESF+ADIHDN    V++GIR+SLG G N+VYDN F+ CS +GLYTY GSD PD S+ GRP+ N+F +N ++N+  G+K   +D+ V+T N FTGT   EF DAQ T WS N
Sbjct:   18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGN 430          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 2.180e-157
Identity = 229/418 (54.78%), Postives = 287/418 (68.66%), Query Frame = 0
Query:   29 EDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY-ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            + GGC T+++LY  +   +    KGP+++LD ND +  + ++ TGKWLLT+DLFV  G+  YCRG G+GG+C ELRI+ST  +DF E+RGHGG+LYFE+T+VTSWD   + P + Y++GRSFI CVSE    ++TC     N+ GECRMDII SEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+G QGGVWTNN MHDNHQYGFDPHDDSDYL IA                             +GG+ A GIFLHRS D  EVY N + +M DAG+A++E+   DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP DN FY+NTI  TETG+KI E+D+  IT N F+GT+  EF +A D VWS N
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGN 420          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 3.840e-143
Identity = 207/348 (59.48%), Postives = 247/348 (70.98%), Query Frame = 0
Query:   36 MTNLYKSR-VESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSK 374
            MT+LY  R  E DG + KGP+Y+LDD+   +  PS +T  WLL ++L++  G +FYC+GT  GGDC++LRIQSTGS DFHEVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE  + + CEG  +N+ GECRMDII SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD TNVYGD+  SDIHH+YYG YSYG QGGVWTNNKMHDN QYGFDPHDDSDYLT                               +GG+ AVGIFLHRSSD   V+DN + +MQDAG+A++E+FDA I+ NT    KYGIR+SLG GNN VY N F   S+
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 1.540e-135
Identity = 224/389 (57.58%), Postives = 263/389 (67.61%), Query Frame = 0
Query:   57 ILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            +LDD+ + + SP+SVT KWLL S+L+V  G+IFYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE  + ETC+G+ +ND GECRMDII SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYG QGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX                +GG +AVGIFLHRSSD+ EVY                                                        G       DAPD S+ GRP+ N+F +N I+NT  G+KI  +D+ VI+ N FTGT   EF DAQ T WS N
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDN 333          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 2.490e-135
Identity = 222/430 (51.63%), Postives = 282/430 (65.58%), Query Frame = 0
Query:   27 YLEDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDET--CEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDA-SSDGRPSDNSFYSNTISNT--ETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            Y E GGCGT+T +Y+++ E DG     P+Y+LD+N+D++    + TG WLL  +L V+ GS     GT   GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N    +   +GRSFINCV++++      C+G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYG QGGVW +N M DN QYGFDPHDDSD LTI+                             +GG  AVGIFLHRSSD  EV+DNVV++MQDAGMA+MES+DA+I+DN+FTN +YGIR+SLG G N + +N+F   ++YGLYTY GSD PD  +S+GRPSDN F  NTI       G+ I E D  V   N FTG S +EF+D+ DT W  N
Sbjct:  192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVV--GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDN 612          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 3.670e-135
Identity = 221/429 (51.52%), Postives = 283/429 (65.97%), Query Frame = 0
Query:   24 GRIYLEDGGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESD--ETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSD--GRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSL---FEFKDAQDTVWSSN 445
            G+ Y+  GGC T+T++Y ++    G    GP+++LD ND+++    S TG WLL  D+ V +GS+    G   GGD   LRIQSTGS D++E+RGHGGSL F +T VTSWDT  K    +Y+  RSFI CVSE  +D  +TC+G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVF+ T V GDI +SDI+ MYYG YS+G  GG+WT NKMHDN QYGFDPHDDSD L IA                             +GG  AVGIFLHRSSD CEV+ N V+DM+DAGMAIMES  A IHDNTFTNVKYGIR+S+G   N V +N F +C +YG+YTYQG+D P+AS D  G   DN+F++NT+   E G+KI +A+  V T N F   S    + F+D +D VW++N
Sbjct:  398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVV--GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNN 818          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 9.860e-121
Identity = 213/445 (47.87%), Postives = 264/445 (59.33%), Query Frame = 0
Query:   31 GGCGTMTNLYKSRVESDGWTPKGPIYILDDNDDIMYS---PSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEYESDE--TCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGM------------------------AIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDAS-SDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN 445
            GGC T+T++Y ++  S      GP+Y+LD +++I+      +S TG WLLTS L +L G   Y  GT  GGD D LRIQST   DF E+RG GGSL F  T VTSWDT       +YE GRSFINCV++++  +  +C G+   + GECRMDII S MG +GWFD+ESYGLTWKVRG C+D SN E+ D  NVYGDIK S+I+ MYYGMYSYG QGGVWT+N M DN  YGFDPHDDSD LTIA                               G+   GI   +  ++ E+Y                                    A+MESF A+I+DNT  N KYGIR+SLG  +N+++DN FD  S YGLYTY+GSD PD S +DGR  DNSF +NTISNT+  MKI E DD   T N F     FEF+D+ DTVW++N
Sbjct:  413 GGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824          
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 365 bits (937), Expect = 1.050e-118
Identity = 212/455 (46.59%), Postives = 267/455 (58.68%), Query Frame = 0
Query:    4 PDTCTGTKSSTRWASGTGLNGRIYLED------GGCGTMTNLYKSRVESDGWTPKGPIYILD-DNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDCDELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSFINCVSEY--ESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFYSNTISNTETGMKIAEADDTVITGNTF-TGTS---LFEFKDAQDTVWSSN 445
            PD  +  + S R+A   G   R+YLE       GGC T+  +++SR        K P+Y +D D+ D+     + TG WLLT +L+V  G      GT  GGD DELR+ ST  T +  +R HGGSL F  T V SWDT   SP +D  +GRS+I+ VSE   + DETCEG  +N  GE RMDI  SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD  NVYG++ +SDIHH+ +G+Y+YG Q G W  NKMHDN  YGFDPHDDSD+LTI                               G   + GIFLHRSSD   V  N VHD  DAG+A++ESF+AD+ +NTF N KYG+R+S+G  +N   +N+    SKY  YTY GSD PD  S GR  +N F  N+ S  E  +KI EAD T    N F  G +   +  F DA ++V   N
Sbjct:   41 PDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVS---ETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGN 482          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6534.17514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM4_ECTSI1.890e-17962.44Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
D8LC73_ECTSI3.260e-17458.26Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JGU8_9PHAE5.310e-16557.14MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI2.180e-15754.78Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KWQ2_9PHAE3.840e-14359.48MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FIU4_ECTSI1.540e-13557.58Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI2.490e-13551.63Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5JNF5_9PHAE3.670e-13551.52MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FWE8_ECTSI9.860e-12147.87Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D7FXE4_ECTSI1.050e-11846.59Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 217..238
e-value: 2500.0
score: 4.3
coord: 287..311
e-value: 660.0
score: 8.5
coord: 394..415
e-value: 2700.0
score: 4.1
coord: 263..285
e-value: 8.8
score: 15.3
coord: 416..445
e-value: 1600.0
score: 5.7
coord: 336..357
e-value: 17.0
score: 14.3
coord: 359..381
e-value: 240.0
score: 10.5
coord: 313..335
e-value: 1100.0
score: 7.0
IPR039448Right handed beta helix domainPFAMPF13229Beta_helixcoord: 222..336
e-value: 9.1E-14
score: 51.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 57..398
e-value: 1.6E-87
score: 296.0
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 305..430
coord: 245..305
NoneNo IPR availablePANTHERPTHR22990:SF27coord: 305..430
NoneNo IPR availablePANTHERPTHR22990:SF27coord: 245..305
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 89..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6534contigF-serratus_M_contig6534:27769..30541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6534.17514.1mRNA_F-serratus_M_contig6534.17514.1Fucus serratus malemRNAF-serratus_M_contig6534 27769..30556 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6534.17514.1 ID=prot_F-serratus_M_contig6534.17514.1|Name=mRNA_F-serratus_M_contig6534.17514.1|organism=Fucus serratus male|type=polypeptide|length=445bp
MTIPDTCTGTKSSTRWASGTGLNGRIYLEDGGCGTMTNLYKSRVESDGWT
PKGPIYILDDNDDIMYSPSSVTGKWLLTSDLFVLKGSIFYCRGTGIGGDC
DELRIQSTGSTDFHEVRGHGGSLYFENTLVTSWDTPNKSPTDDYENGRSF
INCVSEYESDETCEGQPQNDFGECRMDIIGSEMGYLGWFDSESYGLTWKV
RGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGQQGGVWTNNKMH
DNHQYGFDPHDDSDYLTIANNEVYDNVNHGIIASKRCNNLKIYENEVYNG
GSQAVGIFLHRSSDSCEVYDNVVHDMQDAGMAIMESFDADIHDNTFTNVK
YGIRISLGGGNNNVYDNVFDQCSKYGLYTYQGSDAPDASSDGRPSDNSFY
SNTISNTETGMKIAEADDTVITGNTFTGTSLFEFKDAQDTVWSSN
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR039448Beta_helix
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence