mRNA_F-serratus_M_contig653.17512.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 308 bits (788), Expect = 1.380e-91 Identity = 179/464 (38.58%), Postives = 265/464 (57.11%), Query Frame = 2
Query: 1031 PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
P+ + + +K + K +DGKIEK+K RLVA+GF Q+ V Y SP PS+ASI+++LA A K +L H+D +QAF A +DE++++ +P E V + +AIYGL Q+ R W D + GFEQ KADPCVFRK+ D D IL D + A+ L + F KD+G+ ++ C + R+ + L+ Q Y++S+V RFDV+ + PA+ GV K D+ E +P EA+G++MW +T +RPDI+ AVRAVAR P H K ++KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + IS S+ Q + + ++EAE +A E VK+ LF+R V F+ P ++ V EDN+GA+ L N +S R+KHIDV++H +R + + + +V + +QHAD+LTK L
Sbjct: 39 PEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLAS-LNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGE-------WPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYE-RGSGLGLAVYVDASY-ADAEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKAL 492
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 304 bits (778), Expect = 1.500e-91 Identity = 169/421 (40.14%), Postives = 254/421 (60.33%), Query Frame = 2
Query: 1163 EKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
E Y+PT + +S+R+L A A ++ LRHFD +QAF+++D+DE++++ +PE G + +LNK++YGL QA R W++ + +GF Q AD CVFR + +G + +VVHVDDI + +++ D+F +L +K++GD +Y C R+ LK Q Y E + F V+ + P G+ LS+ D + E++ +P+ E +G+LMW AT RPDIA AVRAVAR+C +P H + + I Y++ T D GIT+ G GL ME + D+D+ + RRSVSG +++ G ISW SR Q+ T+EAE V+LA+ +K+VLFLRQV FM P + VFEDN+GAI+LA N ++ +KHIDV+HH +R+ + + + +V S QHAD LTK L
Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 323 bits (827), Expect = 1.650e-91 Identity = 181/464 (39.01%), Postives = 274/464 (59.05%), Query Frame = 2
Query: 1031 PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
P+ + + +K + K ++GKI+ +K RLVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D +QA+ A +DEE+++++P + + + +AIYGL Q+ R W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ C I R+ + L+ Q Y++SMV+RFDVK ++ PA G K ++ + E +P EA+G++MW +T +RPD++ AVRAVAR P H + KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAE +A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H +R + + V +V + +QHADLLTK L
Sbjct: 776 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 308 bits (789), Expect = 3.210e-91 Identity = 184/481 (38.25%), Postives = 281/481 (58.42%), Query Frame = 2
Query: 1022 VARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEF---------PGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPLDVK 2431
V +P + IG + ++ K + G++ +YK RLVA+G+ Q G+ Y E YSP S+R +LA A+ E+ D + AFL +++EEIY+E+PE +E V L +++YGL QA R WN + + GFE A ADPCV+ + +GE E +V ++VDD+L ++ KA + A + +KF++KD+G + + I + + R L Q Y ES++K+F + K TP GV L+KADEPQ E+K KMK PY VG+LM+ A RPDI+ AV ++RF ENPG H +K+ +YLL TKD GI Y G G EAY+D+D+ D RRSVSG +L+L + W S Q+ A ++EAE +AL++ VK+ +++R++ + + + GA ++EDN+GA+ LA N RTKHID+++H +R+ + V + YV +++Q A +TK L K
Sbjct: 101 VPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGLSSK 577
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 323 bits (827), Expect = 1.760e-90 Identity = 181/464 (39.01%), Postives = 274/464 (59.05%), Query Frame = 2
Query: 1031 PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
P+ + + +K + K ++GKI+ +K RLVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D +QA+ A +DEE+++++P + + + +AIYGL Q+ R W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ C I R+ + L+ Q Y++SMV+RFDVK ++ PA G K ++ + E +P EA+G++MW +T +RPD++ AVRAVAR P H + KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAE +A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H +R + + V +V + +QHADLLTK L
Sbjct: 1155 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 323 bits (827), Expect = 2.080e-90 Identity = 181/464 (39.01%), Postives = 274/464 (59.05%), Query Frame = 2
Query: 1031 PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
P+ + + +K + K ++GKI+ +K RLVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D +QA+ A +DEE+++++P + + + +AIYGL Q+ R W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ C I R+ + L+ Q Y++SMV+RFDVK ++ PA G K ++ + E +P EA+G++MW +T +RPD++ AVRAVAR P H + KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAE +A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H +R + + V +V + +QHADLLTK L
Sbjct: 1175 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 323 bits (827), Expect = 2.380e-90 Identity = 181/464 (39.01%), Postives = 274/464 (59.05%), Query Frame = 2
Query: 1031 PKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
P+ + + +K + K ++GKI+ +K RLVA+GF Q+ V Y SP PS+ASI+++LA A K L H+D +QA+ A +DEE+++++P + + + +AIYGL Q+ R W D + GFEQ KADPCVFRK+VD M++V++VDDIL D+ + A L +KF K++G+ +++ C I R+ + L+ Q Y++SMV+RFDVK ++ PA G K ++ + E +P EA+G++MW +T +RPD++ AVRAVAR P H + KI YL T+D GITY +G GL + Y D+ + A + RRSVSG + +S S+ Q + + ++EAE +A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHIDV++H +R + + V +V + +QHADLLTK L
Sbjct: 1318 PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 315 bits (806), Expect = 2.960e-90 Identity = 180/460 (39.13%), Postives = 277/460 (60.22%), Query Frame = 2
Query: 1046 VIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
VI + ++K K + GKI K K RLVA+GF Q GV Y E +SPT +AAS R+++A A + EL H+D EQAF+++++D E+++++P G V RLNK++YGL QA R + + ++ IGFEQ+ +DPCV R ++ E +V +HVDDIL +A K+ + A LG K++G+ +++ C R+R+ ++ Q Y+ S+++RF+V + + PA S ++ ++ E E P+ E VG+LMW A RPDI+ AVRAVAR P +H K KI YLL T + + Y D+DF + + RRSVSGA++++A + W S+ Q+ + TSEAE +A+ + VK+ LF+ + +F+ PS + ++V EDNEGAI LA N +S R+KHIDV+HH +R+ ++ + V +V SE+QHAD+LTK L
Sbjct: 492 VIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKAL 943
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 320 bits (819), Expect = 5.450e-90 Identity = 185/473 (39.11%), Postives = 286/473 (60.47%), Query Frame = 2
Query: 1013 YDQVARPKDKLVIGTKMLYKRKIGQDGKIEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMV-VVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKK--EAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
++ V P K+ + +K +++ K GKI K+K RLV +G Q +G+ + E +SP +SIR LLA AA +D ++ DA AFL+ D+ EEIY+ PE +QE G V RL K++YGL QA R WN K + IG Q+K DPC++ K + +MV V V VDD+L + DK ++L + FK+ D+G+ ++ + I+R+R+ +++ DQ Y+++++ RF ++ A TP + LSK +P +P+E++KM+ PY EAVG+L++ + + RPDIA AV V+RF NPGPAH V +I +Y+ T DW + Y G + Y DSDF + +D R+SV+G V ++ G++SW ++ Q TA T+EAE +AL+ A ++ L+LR + E + P + +F DN+GA+ LA N RTKHIDV+HH +R+ + ++ YV + D AD LTK L
Sbjct: 872 WELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQE-SGKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYK--SSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNI-KLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSSE-ITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIKPTYVPTSDMVADSLTKSL 1339
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 304 bits (778), Expect = 1.910e-89 Identity = 169/421 (40.14%), Postives = 254/421 (60.33%), Query Frame = 2
Query: 1163 EKYSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVQARRCWNNKFYDDMTAIGFEQAKADPCVFRKVVDGEAEMVVVVHVDDILAHAKDKATMDRFAAELGQKFKLKDMGDGEYYMRCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKTPAASGVPTLSKADEPQNPEEKEKMKMFPY*EAVGALMWTATMARPDIACAVRAVARFCENPGPAHKKEVMKIFQYLLHTKDWGITYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLVLAKGAISWHSRMQEVTAAGTSEAECVALAEAVKDVLFLRQVQEFMEPSMRAGAVNVFEDNEGAIKLATNKHASRRTKHIDVKHHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 2422
E Y+PT + +S+R+L A A ++ LRHFD +QAF+++D+DE++++ +PE G + +LNK++YGL QA R W++ + +GF Q AD CVFR + +G + +VVHVDDI + +++ D+F +L +K++GD +Y C R+ LK Q Y E + F V+ + P G+ LS+ D + E++ +P+ E +G+LMW AT RPDIA AVRAVAR+C +P H + + I Y++ T D GIT+ G GL ME + D+D+ + RRSVSG +++ G ISW SR Q+ T+EAE V+LA+ +K+VLFLRQV FM P + VFEDN+GAI+LA N ++ +KHIDV+HH +R+ + + + +V S QHAD LTK L
Sbjct: 184 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig653.17512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig653.17512.1 >prot_F-serratus_M_contig653.17512.1 ID=prot_F-serratus_M_contig653.17512.1|Name=mRNA_F-serratus_M_contig653.17512.1|organism=Fucus serratus male|type=polypeptide|length=303bp MKHSSLGGNNYVVIFVDDCTHFKVVKFVKKKSDATAALLSLVADYITPQKback to top mRNA from alignment at F-serratus_M_contig653:127639..130440- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig653.17512.1 ID=mRNA_F-serratus_M_contig653.17512.1|Name=mRNA_F-serratus_M_contig653.17512.1|organism=Fucus serratus male|type=mRNA|length=2802bp|location=Sequence derived from alignment at F-serratus_M_contig653:127639..130440- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig653:127639..130440- >mRNA_F-serratus_M_contig653.17512.1 ID=mRNA_F-serratus_M_contig653.17512.1|Name=mRNA_F-serratus_M_contig653.17512.1|organism=Fucus serratus male|type=CDS|length=1818bp|location=Sequence derived from alignment at F-serratus_M_contig653:127639..130440- (Fucus serratus male)back to top |