mRNA_F-serratus_M_contig653.17511.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig653.17511.1
Unique NamemRNA_F-serratus_M_contig653.17511.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 6.530e-35
Identity = 106/291 (36.43%), Postives = 152/291 (52.23%), Query Frame = 1
Query:   37 AWALRCDGTSDEQEYTE----DISNVISEIPPVSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRKSSVMAKAAKGSPNIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            AW LR  G   E+++T     DIS + S  P +S   +         XXX      P A  A    +R+      AAKGS NI+N+F  G G +P+ RTR  G  E V SV+F +PAP P+ +Q  HC   F N QG  +H +  H  AN  +G RL + + +     + PWE  G GRC+  ++  G  GA  F LQPK+     L + GF+  + +   R GA +R  Y  R +A  I++LR L++  +A+++A  ++P+QY    +    +NISKW KDED IV  AA
Sbjct:   52 AWDLRSSGVFSEEDWTTQVDGDISGINSARPTLSSEHAVASSASGKRXXXXXXXXXPAARGAPNRGKRQRE---DAAKGSLNIYNSFAIGSG-QPVLRTRA-GVQEYVSSVSFASPAPAPR-VQCPHCPTTFVNAQGLGLHMKTNHSTANVFQGQRLQRMLGDDAKGDVLPWERAGPGRCYHVKI-DGITGAASFVLQPKRVPNIDLESDGFTPAEPR-SARRGAAKRNRYDFRFKAHVIQQLRILEEDRQALWQAEHLSPMQYLETHMKVPRTNISKWVKDEDEIVAFAA 334          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5K6P0_9PHAE (C2H2-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P0_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.500e-32
Identity = 104/305 (34.10%), Postives = 144/305 (47.21%), Query Frame = 1
Query:    4 VTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPPVSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRKSSVMAKAAKGSP-------NIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            V  E    +  AW L+  G  +E+E+   I      I   S T  +             P + PP A A+ A +RK +   K A+          NI NAF RG G KP+ RTR  G +E V  + FP PAP  + I   HC   F NEQG  +H + +H  AN   G RL + +       + PW   G GRCW  ++  G  GA  F LQ K+     L + GF+  D K     GA + ++Y  R +A  + +LR LQ+    +F+  ++TPLQY    +    S I KWA+DE NIV+ AA
Sbjct:   53 VAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGI--TSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLGGNIINAFARGSG-KPIERTR-GGVIEHVSGINFPPPAPE-RRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKCKLYDFRFKAYVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAA 349          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5JFX9_9PHAE (C2H2-type domain-containing protein n=15 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX9_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 3.690e-31
Identity = 106/305 (34.75%), Postives = 144/305 (47.21%), Query Frame = 1
Query:    4 VTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPPVSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRK-----SSVMAKAAKG--SPNIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            V  E    +  AW L+  G  +E+E+   I      I   S T  +             P + PP A A+ A +RK          +AA+G    NI NAF RG G KP+ RTR  G  E V  + FP PAP  + I   HC   F NEQG  +H + +H  AN   G RL + +       + PW   G GRCW  ++  G  GA  F LQ K+     L + GF+  D K     GA +R+ Y  R +A  + +LR LQ+    +F+  ++TPLQY    +    S I KWA+DE NIV+ AA
Sbjct:   45 VAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGI--TSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRWKQARDRAAQGVLGGNIINAFARGSG-KPIERTR-GGVTEHVSGINFPPPAPE-RRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAA 341          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5K4R4_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R4_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 6.740e-31
Identity = 105/305 (34.43%), Postives = 142/305 (46.56%), Query Frame = 1
Query:    4 VTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPPVSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRKSSVMAKAAKGSP-------NIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            V  E    +  AW L   G  +E+E+   I      I   S T  +             P + PP A A+ A +RK +   K A+          NI NAF RG G KP+ RTR  G  E V  +TFP PAP  + I   HC   F NEQG  +H + +H  AN   G RL + +       + PW   G GRCW  ++  G  GA  F LQ K+     L + GF+  D K     GA +R+ Y  R +   + +LR LQ+    +F+  ++TPLQY    +    S I KWA+DE NIV+ AA
Sbjct:   45 VAKERWDAIENAWGLEQTGVFNEEEWITQIDGEAQGI--TSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLGGNIINAFARGSG-KPIERTR-GGVTEHVSGITFPPPAPE-RRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKTHVVIQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAA 341          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5JMI5_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI5_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 6.140e-30
Identity = 81/226 (35.84%), Postives = 111/226 (49.12%), Query Frame = 1
Query:  259 GSPNIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNG-ESVAMWPWEGVGLGRCWLARLGTG---------PAGATVFQLQPKK-------RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            G+ NI NAF +G G KP+ RTR DGS E + ++ F  P P    +    C   F N QG  VH +  H R       R   + + G E+ ++ PW G   GRC       G         P G+  F LQP +        L+N GFS  +  P    GA  RR YT+R++   I++LR L+ +   +   + MTPL Y     G + SNISKW KDED++V+ AA
Sbjct:   35 GTHNIINAFAKGSG-KPVVRTRGDGSTEEITNINFTAPPPPQPTVPCTKCNRRFFNTQGLGVHIKTDHEREAKISLQRWCSTNRKGAEASSLLPWGGTPSGRCCHVAFHHGESRGCGATCPPGSVTFVLQPLRPGAERNNNLVNDGFSQSESPPKKTCGAASRRRYTSREKVGVIQELRDLESRSTEVRAHFGMTPLFYLEHKSGISASNISKWQKDEDSLVQQAA 259          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5LCI6_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCI6_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.130e-24
Identity = 95/305 (31.15%), Postives = 132/305 (43.28%), Query Frame = 1
Query:    4 VTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPPVSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRKSSVMAKAAKGSP-------NIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            V  E    +  AW L+  G  +E+E+   I      I   S T  +             P + PP A A+ A +RK +   K A+          NI NAF RG G    +R R      +      P P          HC   F NEQG  +H + +H  AN     RL + +       + PWE  G GRCW  ++  G  GA  F LQ K+     L + GF+  D K     GA +R+ Y  R +A  + +LR LQ+    +F+  ++TPLQY    +    S I KWA+DE NIV+ AA
Sbjct:   45 VAKERWDAIENAWGLKQTGVFNEEEWITQIDGEAQGI--TSSTRPSFLTPQDAGGARGAPSSHPPPATAAAAGKRKVADRGKQARDRAAQGVLGGNIINAFARGSGKPTQWRKRTRTRAPSQPYFVIPCP----------HCPMTFVNEQGLGIHVKTQHSNANMSNRLRLQRMLGKIPKGYVQPWEEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAA 334          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5KEX5_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEX5_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.390e-24
Identity = 101/300 (33.67%), Postives = 132/300 (44.00%), Query Frame = 1
Query:    4 VTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPPVSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRKSSVMAKAAKG--SPNIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            V  E    +  AW L+  G   E+E+   I      I     TSST            + P D     A  A  R      +AA+G    NI NAF RG G KP+ RTR  G  E V  +TFP PAP  + I   HC   F NEQG  +H + +H  AN   G RL + +       + PWE  G GRCW  ++  G  GA  F LQ K+     L + GF+  D K     GA +R+ Y +                   +F+  ++TPLQY    +    S I KWA+DE NIV+ AA
Sbjct:   14 VAKERWDAIENAWGLKQTGVLKEEEWITKIDGEAQGI-----TSSTRPSF--------LTPQD-----AGGARDRGKQARDRAAQGVLGGNIINAFARGSG-KPIERTR-GGVTEHVSGITFPPPAPE-RRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWEEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDS------------------DLFKEEQLTPLQYLEDRLKVNFSLIVKWAQDEANIVQSAA 271          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5K3E7_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E7_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.320e-22
Identity = 71/197 (36.04%), Postives = 98/197 (49.75%), Query Frame = 1
Query:  307 PLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKK----RLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            P     + G  E V  + FP PAP  + I   HC   F NEQG  +H + +H  AN   G RL + +       + PW   G GRCW  ++  G  GA  F LQ K+     L + GF+  D K     GA +R+ Y  R +A  + +LR LQ+    +F+  ++TPLQY    +    S I KWA+DE NIV+ AA
Sbjct:   12 PTIERTRGGVTEHVSGINFPPPAPE-RRIPCPHCPMTFVNEQGLGIHVKTQHSNANMSNGLRLQRMLGKTPKGYVQPWGEAGPGRCWHVKV-DGATGAASFVLQRKRFRDLDLESDGFT--DRKVKETRGAVKRKRYDFRFKAHVVTQLRLLQEDAADLFKEEQLTPLQYLEDRLKVNYSLIVKWAQDEANIVQSAA 204          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.650e-22
Identity = 73/229 (31.88%), Postives = 107/229 (46.72%), Query Frame = 1
Query:  208 ASRADRRKSSVMAKAA-KGSPNIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNG--ESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKKRLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            AS   +RK    A A   G+PNI NAF+R  G +P+ RTRKDGS E +  +TFP P P    +    C  +F N QG  VH +  H + +   G     S  +   +  +  PW GV  GRCW  +     +G                             A  R  Y  R++ + +E+LR L+ + + +   + +TPL Y S   G A +NISKW ++E+ ++EVAA
Sbjct: 1196 ASSGPKRKGRARAAAGIAGTPNIVNAFVRATG-EPMVRTRKDGSTENIMDITFPDPPPLTPKVPCPKCHRLFFNNQGLGVHVKTDH-KDDVRIGVTRWCSTASAVVDPSSTLPWSGVPSGRCWRVKFHHQASGL----------------------------ASPRGSYDPREKLSVVEQLRELESRAQEVRAHFNLTPLGYLSNKTGIAVANISKWQREEEKLLEVAA 1394          
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Match: A0A6H5JV77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV77_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 5.660e-22
Identity = 103/302 (34.11%), Postives = 139/302 (46.03%), Query Frame = 1
Query:    4 VTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPP---VSHTSSTXXXXXXXXXXXSVPPADPPAAVASRADRRKSSVMAKAAKGSPNIWNAFIRGQGGKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHRRMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGATVFQLQPKKRLLNGGFSCDDD-----KPDGRSGAKQRRVYTNRKRAAAIEKLRRLQKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAA 885
            V  E    +  AW L+ +G  DE+E+   I      I     +S +S  XXXXXXXXXXX             +A  R      +AA    NI NAF  G  G P+ RT   G  E +  ++FP P P  +     HC   F NEQG  ++ R +H  AN   G RL   ++     ++ PWE  G GRCW  +      G   F LQ +KR L+     D D     KP     A +RR Y  R +A A+ +LR  Q     +++  + TPLQ+    +    SNI KWAK+E  +V VAA
Sbjct:   45 VAKERRDAIESAWGLKQNGVFDEEEWVTKIDGETQGITSSIRLSSSSQXXXXXXXXXXXXXXXXXXXXGTARRKAVDRGKQARERAATLGGNICNAFAIGSQG-PIERTC-GGVKELISGISFPPPTPESRR-SCPHCPTTFVNEQGLGIYVRTQHSSANMSNGVRLRCMLRKDVGGSVLPWEAAGPGRCWHVKFDHA-MGTASFVLQ-RKRFLD--LDLDSDGFMGRKPKDTRRAPKRRRYDFRFKAHAVNQLRIFQDNAEDLWKEEQRTPLQFLEGRLKIPYSNIVKWAKNEKELVAVAA 339          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig653.17511.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LRF1_ECTSI6.530e-3536.43C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K6P0_9PHAE4.500e-3234.10C2H2-type domain-containing protein (Fragment) n=1... [more]
A0A6H5JFX9_9PHAE3.690e-3134.75C2H2-type domain-containing protein n=15 Tax=Ectoc... [more]
A0A6H5K4R4_9PHAE6.740e-3134.43C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JMI5_9PHAE6.140e-3035.84C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LCI6_9PHAE1.130e-2431.15C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KEX5_9PHAE2.390e-2433.67C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K3E7_9PHAE1.320e-2236.04C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JH58_9PHAE1.650e-2231.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JV77_9PHAE5.660e-2234.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig653contigF-serratus_M_contig653:52788..54285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.4
Seed ortholog evalue8.3e-32
Seed eggNOG ortholog2880.D8LRF1
Hectar predicted targeting categoryother localisation
EggNOG OGs2DCSR@1,2S5KN@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size890
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932013.270846-CDS-F-serratus_M_contig653:52788..533671622932013.270846-CDS-F-serratus_M_contig653:52788..53367Fucus serratus maleCDSF-serratus_M_contig653 52789..53367 -
1690964102.4868674-CDS-F-serratus_M_contig653:52788..533671690964102.4868674-CDS-F-serratus_M_contig653:52788..53367Fucus serratus maleCDSF-serratus_M_contig653 52789..53367 -
1622932013.290453-CDS-F-serratus_M_contig653:53976..542851622932013.290453-CDS-F-serratus_M_contig653:53976..54285Fucus serratus maleCDSF-serratus_M_contig653 53977..54285 -
1690964102.503521-CDS-F-serratus_M_contig653:53976..542851690964102.503521-CDS-F-serratus_M_contig653:53976..54285Fucus serratus maleCDSF-serratus_M_contig653 53977..54285 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig653.17511.1prot_F-serratus_M_contig653.17511.1Fucus serratus malepolypeptideF-serratus_M_contig653 52789..54285 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig653.17511.1

>prot_F-serratus_M_contig653.17511.1 ID=prot_F-serratus_M_contig653.17511.1|Name=mRNA_F-serratus_M_contig653.17511.1|organism=Fucus serratus male|type=polypeptide|length=296bp
VVTDEVLGLLGQAWALRCDGTSDEQEYTEDISNVISEIPPVSHTSSTAAA
PAQASQAQSVPPADPPAAVASRADRRKSSVMAKAAKGSPNIWNAFIRGQG
GKPLFRTRKDGSVETVQSVTFPTPAPTPKLIQSKHCEAMFQNEQGYSVHR
RMRHPRANAHEGTRLLKSMKNGESVAMWPWEGVGLGRCWLARLGTGPAGA
TVFQLQPKKRLLNGGFSCDDDKPDGRSGAKQRRVYTNRKRAAAIEKLRRL
QKQPRAIFEAYRMTPLQYASKTVGTAESNISKWAKDEDNIVEVAAN
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mRNA from alignment at F-serratus_M_contig653:52788..54285-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig653.17511.1 ID=mRNA_F-serratus_M_contig653.17511.1|Name=mRNA_F-serratus_M_contig653.17511.1|organism=Fucus serratus male|type=mRNA|length=1498bp|location=Sequence derived from alignment at F-serratus_M_contig653:52788..54285- (Fucus serratus male)
GTAGTCACAGACGAGGTTTTGGGCTTACTGGGCCAGGCATGGGCACTGCG CTGCGATGGTACGAGCGACGAGCAGGAGTACACTGAGGACATCAGCAACG TGATAAGCGAGATACCACCGGTCAGCCACACTAGCTCGACAGCGGCGGCT CCTGCACAGGCCTCGCAAGCACAATCGGTGCCACCAGCGGATCCTCCTGC GGCTGTAGCGTCAAGAGCCGATCGGAGGAAAAGCAGCGTGATGGCGAAGG CCGCCAAGGGATCCCCGAACATCTGGAACGCCTTCATCCGAGGCCAGGGA GGCAAACCGGTGAGTGTATGCTGTATGTTGTACAGTCCAGTACTGTAGTA CAGTAGAGCCGTATATATCAGCCGATGTGTTGCATCAGCATCCCCTTTGT GTCCACTGCTGTACTGTAAAGTATTGTATGTGCTGTATAATACAGTACCC GAGTACTGTATGATACAGCACATACAATATTGTACTGCTGTCTGTGCTGT ACTACTGTACTGTGCTGCTGTCTAACTGTACTACTGTACTGTATTGTACT TGCACTGCACGCTGGACTGTACAGCAGTACTGCTGCGGTACAGCACTAAG CAGCGACATATCATACGTAGACGTATTTCATACTGTACTGCTGTGCTCCT GTACTGCTGTACAGTACTGCTGCACAGTAGTATTGTACTGTACTGAACTT CAATGTATAGCTTATATATTCGCTGTTCTGCTACAGCAGCAGATATAACC TTTGATTACTGTGAAGTACACTGCTGTAGCTTTTGTACAACAGCGCCGCA CACATTTTCGGGGAAACGTGTGTGTAAGAGATGCTGTACTTTGAGGTCGA GGGTGAAACAACGCAGATTTGGTGGGAACTCACTCACTTCTTTTACTTTC CACTTTGGTCACGCGCAGTTGTTCAGGACACGGAAGGATGGATCCGTGGA AACTGTGCAGAGCGTCACCTTTCCGACACCTGCTCCAACGCCGAAGCTGA TCCAGTCCAAGCACTGCGAGGCGATGTTCCAAAACGAGCAAGGGTACTCG GTGCACCGGAGAATGCGACACCCGCGAGCAAACGCGCACGAAGGGACGAG GCTCTTGAAGAGCATGAAAAACGGTGAGAGTGTTGCGATGTGGCCGTGGG AAGGAGTGGGCTTGGGCCGTTGCTGGCTGGCTCGTCTCGGCACAGGGCCT GCAGGAGCAACTGTGTTTCAACTCCAGCCAAAGAAGCGCTTGTTGAACGG TGGGTTCAGCTGCGACGATGACAAGCCTGATGGTCGCTCTGGCGCCAAAC AACGCCGGGTGTACACCAACAGGAAGCGAGCAGCAGCCATCGAGAAGCTA CGACGACTCCAGAAGCAACCGCGCGCTATATTTGAAGCGTATAGGATGAC CCCCCTTCAGTATGCTTCAAAGACGGTTGGCACCGCCGAGTCCAACATCT CGAAGTGGGCTAAGGACGAAGACAATATCGTAGAAGTGGCCGCGAACA
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Coding sequence (CDS) from alignment at F-serratus_M_contig653:52788..54285-

>mRNA_F-serratus_M_contig653.17511.1 ID=mRNA_F-serratus_M_contig653.17511.1|Name=mRNA_F-serratus_M_contig653.17511.1|organism=Fucus serratus male|type=CDS|length=1776bp|location=Sequence derived from alignment at F-serratus_M_contig653:52788..54285- (Fucus serratus male)
GTAGTCACAGACGAGGTTTTGGGCTTACTGGGCCAGGCATGGGCACTGCG
CTGCGATGGTACGAGCGACGAGCAGGAGTACACTGAGGACATCAGCAACG
TGATAAGCGAGATACCACCGGTCAGCCACACTAGCTCGACAGCGGCGGCT
CCTGCACAGGCCTCGCAAGCACAATCGGTGCCACCAGCGGATCCTCCTGC
GGCTGTAGCGTCAAGAGCCGATCGGAGGAAAAGCAGCGTGATGGCGAAGG
CCGCCAAGGGATCCCCGAACATCTGGAACGCCTTCATCCGAGGCCAGGGA
GGCAAACCGGTAGTCACAGACGAGGTTTTGGGCTTACTGGGCCAGGCATG
GGCACTGCGCTGCGATGGTACGAGCGACGAGCAGGAGTACACTGAGGACA
TCAGCAACGTGATAAGCGAGATACCACCGGTCAGCCACACTAGCTCGACA
GCGGCGGCTCCTGCACAGGCCTCGCAAGCACAATCGGTGCCACCAGCGGA
TCCTCCTGCGGCTGTAGCGTCAAGAGCCGATCGGAGGAAAAGCAGCGTGA
TGGCGAAGGCCGCCAAGGGATCCCCGAACATCTGGAACGCCTTCATCCGA
GGCCAGGGAGGCAAACCGTTGTTCAGGACACGGAAGGATGGATCCGTGGA
AACTGTGCAGAGCGTCACCTTTCCGACACCTGCTCCAACGCCGAAGCTGA
TCCAGTCCAAGCACTGCGAGGCGATGTTCCAAAACGAGCAAGGGTACTCG
GTGCACCGGAGAATGCGACACCCGCGAGCAAACGCGCACGAAGGGACGAG
GCTCTTGAAGAGCATGAAAAACGGTGAGAGTGTTGCGATGTGGCCGTGGG
AAGGAGTGGGCTTGGGCCGTTGCTGGCTGGCTCGTCTCGGCACAGGGCCT
GCAGGAGCAACTGTGTTTCAACTCCAGCCAAAGAAGCGCTTGTTGAACGG
TGGGTTCAGCTGCGACGATGACAAGCCTGATGGTCGCTCTGGCGCCAAAC
AACGCCGGGTGTACACCAACAGGAAGCGAGCAGCAGCCATCGAGAAGCTA
CGACGACTCCAGAAGCAACCGCGCGCTATATTTGAAGCGTATAGGATGAC
CCCCCTTCAGTATGCTTCAAAGACGGTTGGCACCGCCGAGTCCAACATCT
CGAAGTGGGCTAAGGACGAAGACAATATCGTAGAAGTGGCCGCGAACTTG
TTCAGGACACGGAAGGATGGATCCGTGGAAACTGTGCAGAGCGTCACCTT
TCCGACACCTGCTCCAACGCCGAAGCTGATCCAGTCCAAGCACTGCGAGG
CGATGTTCCAAAACGAGCAAGGGTACTCGGTGCACCGGAGAATGCGACAC
CCGCGAGCAAACGCGCACGAAGGGACGAGGCTCTTGAAGAGCATGAAAAA
CGGTGAGAGTGTTGCGATGTGGCCGTGGGAAGGAGTGGGCTTGGGCCGTT
GCTGGCTGGCTCGTCTCGGCACAGGGCCTGCAGGAGCAACTGTGTTTCAA
CTCCAGCCAAAGAAGCGCTTGTTGAACGGTGGGTTCAGCTGCGACGATGA
CAAGCCTGATGGTCGCTCTGGCGCCAAACAACGCCGGGTGTACACCAACA
GGAAGCGAGCAGCAGCCATCGAGAAGCTACGACGACTCCAGAAGCAACCG
CGCGCTATATTTGAAGCGTATAGGATGACCCCCCTTCAGTATGCTTCAAA
GACGGTTGGCACCGCCGAGTCCAACATCTCGAAGTGGGCTAAGGACGAAG
ACAATATCGTAGAAGTGGCCGCGAAC
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