mRNA_F-serratus_M_contig650.17490.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig650.17490.1
Unique NamemRNA_F-serratus_M_contig650.17490.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: D7G625_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G625_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 1.670e-85
Identity = 171/264 (64.77%), Postives = 204/264 (77.27%), Query Frame = 3
Query:  198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEG--ARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSD-MSQGRASVSRQMEIVRRMQRSYPFLRPEGG 980
            +AI KQ+ FRER S L+D+ +  DAE SL+NML DFV + KN VPE+LR+  VAAMDMSVVSR LE+ET+ +IRGTV+GRIPRML IQ TFLKKELL +M  IDEL+QANQVTLRLIS +PAAL++  V KV+   + AA SRRLEPTT VHRSMR  +REIERLLTSS GF G        AEG+ A  GLL DEE GKLAL +H LQ  LRQN+SRF++R RR LEEDL+D M++GR +VS+Q+ +V RMQRSYPFLR  GG
Sbjct: 1887 EAIRKQVFFRER-SELMDKDSLEDAETSLQNMLHDFVYDDKNNVPEDLREEAVAAMDMSVVSRELEEETKYSIRGTVNGRIPRMLFIQATFLKKELLHSMQAIDELFQANQVTLRLISVIPAALLLFAVAKVSGPFVHAASSRRLEPTTAVHRSMRASLREIERLLTSSRGFVGSHEPVGEEAEGF-ASRGLLQDEEMGKLALHMHELQTTLRQNASRFDSRARRRLEEDLTDLMARGRPTVSQQIAVVHRMQRSYPFLRAGGG 2148          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A6H5L1C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C8_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 2.650e-69
Identity = 166/305 (54.43%), Postives = 197/305 (64.59%), Query Frame = 3
Query:  198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQT----------------TFLKKELLQAMGGIDELYQANQ------------------------VTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHT----LQNILRQNSSRFEARVRRGLEEDLSD-MSQGRASVSRQMEIVRRMQRSYPFLRPEG 977
            +AI KQI FRER S L+D+ +  DAE SL+NML DFV + KN VPE LR+  VAAMDMSVVSR LE+ET+ +IRGTV+GRIPRMLLIQ                 TFLKKELL +M  IDEL+QANQ                        VTLRLIS +PAAL++  V KV+   + AA SRRLEPTT VHRSMR  +REIERLLT   G     G    EG+ A  GLL DEE GKLA+  H      Q  LRQN+SRF++R RR LEEDL+D M++GR +VS+Q+ +V RMQRSYPFLR  G
Sbjct: 1934 EAIGKQIFFRER-SELMDKDSLEDAETSLQNMLHDFVYDDKNNVPENLREEAVAAMDMSVVSRQLEEETKYSIRGTVNGRIPRMLLIQASSFLNPTTSIAPARIATFLKKELLHSMQAIDELFQANQASAGALFTAAAYCSAHSKIFALAWVTLRLISVIPAALLLFAVAKVSGPFVHAASSRRLEPTTAVHRSMRASLREIERLLTGFVGSHEPVG-EELEGF-ASRGLLQDEEMGKLAVRGHVDCELSQTTLRQNASRFDSRTRRRLEEDLADLMARGRPTVSQQIAVVHRMQRSYPFLRAGG 2235          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A835Z2D9_9STRA (ATP synthase regulation protein NCA2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D9_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.280e-53
Identity = 126/290 (43.45%), Postives = 178/290 (61.38%), Query Frame = 3
Query:  201 AIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGF-----------------EGGEGARRAEGWT---AGAGL-----LDDEET----------GKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            AI   +LFR RQ+ L +E A  DA+ SL+N+LRDF+ + + KVPE+ R+   + MDM+ ++R  EKE   A+RG ++G + R+LLIQ   LK + L AM  ID+LY ANQ+ L+L+++LPA +V+AG + V   +  A  SRRLEPT +VH  MR  +RE+ER LT+SS F                 +GG G+    G T   AGAG      +D + T          G L L +H  Q +L+QN+SRF+AR RRG+EEDL D+     +V++Q+ +VRRMQR+YPFL
Sbjct:  840 AIVNGVLFRRRQA-LTEEGAMEDAKTSLQNLLRDFLKDMQPKVPEQEREQQASQMDMTPITRRFEKEASRALRGIIAGPLLRVLLIQIAHLKLQGLSAMEAIDDLYNANQLNLQLLASLPALIVVAGTYFVARNVFFAIMSRRLEPTAIVHAGMRGALREVERALTNSSAFSRQAQPLILREAVDGPDDGGAGSDIGGGDTFVVAGAGQDRIGGIDRDTTSILGLSAGGCGALVLQVHLFQQLLQQNASRFDARTRRGVEEDLRDLLAHGITVTQQLAVVRRMQRTYPFL 1128          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: W7TDI7_9STRA (Nuclear control of ATP synthase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI7_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.660e-40
Identity = 116/325 (35.69%), Postives = 177/325 (54.46%), Query Frame = 3
Query:   36 MQAPTVSRFLLGTARGVLPLPMIRESCT--SRCFGLRCVAA---DFTVTVAVAMLLGDGQAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDM--SQGRASVSRQMEIVRRMQRSYPFLR---PEGG 980
            +  P ++ +L  T RG   +  +R +    SR   ++  AA     T        L  G+AI + ++  +RQ  L DE A  DA+ASLR ML DF+++    +    +   + AMD+S+VS   +KE R A+R   SG+I RMLLIQ  ++KKELL AM  ID+LY AN+V L+  + +PA L+    ++++  L  A  SRR+   + VH S+R  +R++ERLL  +                A   +LDD   G++ L +   QNILR N+ R E  VRR L ED+SD+    GR +V +Q+  + R++++Y FL+   P GG
Sbjct:  786 LDRPKMNEWLAWTLRGAAYVFFLRTTAELWSRRESIQATAALTKKNTEEFLAYRFLEPGKAILEDLILNKRQR-LTDEGAITDAQASLRRMLSDFIDDTYPHIDPATKKAALEAMDISLVSAQYDKEIRHAVRNVFSGKIVRMLLIQMQYVKKELLVAMEAIDDLYNANKVNLQAFAVVPALLLTYCAYRMSLYLFGALASRRISNISGVHASLRRTLRDLERLLILAPRLPPSVTPSLPSSLGAKTTVLDDRRLGEVVLLVADFQNILRVNAPRLEKGVRRALMEDMSDLLGGPGRLTVEQQLTSLNRVRKAYAFLQSRTPGGG 1109          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A024GNH7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GNH7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 3.570e-33
Identity = 97/261 (37.16%), Postives = 148/261 (56.70%), Query Frame = 3
Query:  201 AIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRS----MRTLVREIERLLTSSSGFEG--GEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            AI  +ILF  R++ + D AA  DA+ASL+ ML DF  +    +P +  +  V +MDMS+VS   EK+   A+R  ++G I RMLLIQ  F+KKEL+ AMG ID+L  ANQ+ L+L++T+P  L  AG++ +T +L    + +  E  +   R     +R  +R+IERLL   +       EG   A+  T     L+  + G L L LH L+++   +   F    +   EEDLSD+ +    VS+++ +++RM  SYPFL
Sbjct:  332 AILGEILFN-RKNDIQDAAALLDAKASLQRMLHDFACDTNPNMPPQELERKVESMDMSLVSFVYEKQLSTAVRSLMTGDIVRMLLIQIQFIKKELMVAMGAIDDLMHANQLNLQLLATIPTILAGAGIYGLTKMLFFQLYRKTTEHLSYDSREVASHLRRFLRDIERLLNKQNRGSSLQAEGVEEAQWHT-----LNARDLGYLILLLHQLRSLFDSHRVLFRDEDQVRFEEDLSDLLEEGLYVSQRLAVIQRMYHSYPFL 586          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A8K1CMR2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMR2_PYTOL)

HSP 1 Score: 138 bits (348), Expect = 5.460e-33
Identity = 91/260 (35.00%), Postives = 137/260 (52.69%), Query Frame = 3
Query:  198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTL----VHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            QAI  +++  ++   + D AA  D   SL+ ML DF  +    +       +V  MDMSVVS   EK+   A+R  +SG I RMLLIQ  F+KKEL+ AMG IDEL  ANQ+ L++++T+P  LV  GV+ +   L    + R  E        +   +R ++R+IERLL   +     +G    +    G       + G L L LH L ++   N   FE   ++  +EDL+D+ +    VS+Q+ +++RM  SYPFL
Sbjct:  349 QAIVGEVILNQKPE-IQDAAALLDTRESLQRMLSDFARDTNPNITSSELQRIVKDMDMSVVSLQYEKQLGSAVRNLMSGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQVMATIPTFLVFGGVYTLAKALFAEIYKRTSERLYYDMADIAGFLRNILRDIERLLNKQNRVSWPDGTGEDDAMRLGT-----RDLGLLLLLLHQLHDVYESNREFFEEEEQQRFDEDLNDLVEEGLLVSQQLAVIQRMYHSYPFL 602          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: M4BLQ4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BLQ4_HYAAE)

HSP 1 Score: 137 bits (345), Expect = 1.280e-32
Identity = 94/265 (35.47%), Postives = 141/265 (53.21%), Query Frame = 3
Query:  198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLE----PTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTAGAGLLDD-----EETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            QAI  +++  ++   + D  A  D + SLR ML DFV +    V +   D +   MDMSVVS   EK+  GA+R  ++G I RMLLIQ  F+KKEL+ AMG IDEL  ANQ+ L++++T+P  LV  G++K+ T      + R  +     +T + R +R  +R+IERLL   +                G G  DD      + G L L LH L+++     + F+       EEDL+D+      VS+Q+ +++RM  S+PFL
Sbjct:  338 QAIFVEVVLNQKPE-IQDAMALLDTKQSLRRMLADFVKDTNPNVTQADMDRITNEMDMSVVSLQYEKQLTGAVRNLITGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQILATIPTFLVFGGLYKLVTSTFHMIYKRMSDRLYYDSTEIARFLRNNLRDIERLLNKQN---------------RGVGASDDAVLGVRDLGFLILLLHQLRDLFEAYRALFQEEEHERFEEDLNDLIGEGLLVSQQLAVIQRMYHSHPFL 586          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: F0W8C8_9STRA (Uncharacterized protein AlNc14C236G9393 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8C8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.350e-32
Identity = 98/264 (37.12%), Postives = 148/264 (56.06%), Query Frame = 3
Query:  201 AIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLEPTTLVHRS----MRTLVREIERLLT-----SSSGFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            AI  +ILF  R++ + D AA  DA+ASL+ ML DF  +    +P +   + V +MDMS+VS   EK+   A+R  ++G I RMLLIQ  F+KKEL+ AMG ID+L  ANQ+ L+L++T+P  L  AG++ +T +L    + +  E  +   R     +R  +R+IERLL      SS   +G E A+    W      LD  + G L L L+ L+ +   +   F    +   EEDL D+ +    VS+++ +++RM  SYPFL
Sbjct:  330 AIVGEILFN-RKTDIQDAAALLDAKASLQRMLHDFACDTNPSMPPQELQSKVESMDMSLVSFVYEKQLSTAVRNLMTGDIVRMLLIQIQFIKKELMVAMGAIDDLMHANQLNLQLLATIPTILAGAGIYGLTKMLFFQLYKKTTEHVSYDSREVASHLRRFLRDIERLLNKQNRGSSLQIKGAEEAQ----WHT----LDARDLGYLVLLLYQLRGLFDSHRVLFRDEDQVRFEEDLCDLLEEGLYVSQRLAVIQRMYHSYPFL 584          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A2D4CDF1_PYTIN (VOC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDF1_PYTIN)

HSP 1 Score: 135 bits (339), Expect = 1.750e-31
Identity = 97/269 (36.06%), Postives = 142/269 (52.79%), Query Frame = 3
Query:  198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLE----PTTLVHRSMRTLVREIERLLTSSS-GFEGGEGARRAEGWTA----GAGLLDD----EETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            QAI  ++L  ++   + D AA  D + SLR ML DFV +       E    VV  MDMSVVS   EK+   A+R  +SG I RMLLIQ  F+KKEL+ AMG IDEL  ANQ+ L++++T+P  LV  G +++   L    + R  E        +   +R ++R+IERLL   + G +           TA    G  L+DD     + G L L LH L+++       F    +   +EDL+D+ +    VS+Q+ +++RM  S+PFL
Sbjct:  548 QAIVAEVLLNQKPE-IQDAAALRDTKESLRRMLADFVRDTNPTTNSEELQRVVREMDMSVVSLQYEKQIGNAVRNLMSGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQMMATVPTFLVFGGAYQLAKELFFQVYRRTSERLFYDPAEIAGFLRNILRDIERLLNKQNRGGQSXXXXXXXXXXTASGRGGVVLVDDVLGARDMGLLMLLLHQLRDVFDAYKDLFRDEEQERFDEDLNDLIEEGLLVSQQLAVIQRMYHSHPFL 815          
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Match: A0A3M6VUA8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUA8_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.280e-31
Identity = 92/261 (35.25%), Postives = 143/261 (54.79%), Query Frame = 3
Query:  198 QAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDFVNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLLIQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVLLLAAFSRRLE----PTTLVHRSMRTLVREIERLLTSSS-GFEGGEGARRAEGWTAGAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGRASVSRQMEIVRRMQRSYPFL 965
            QAI ++++  ++   + D  A  D + SLR ML DFV +    + +     ++  MDMSVVS   EK+  GA+R  ++G I RMLLIQ  F+KKEL+ AMG IDEL  ANQ+ L++++T+P  LV  G++K+ T      + R  +     ++ +   +R  +R+IERLL   + G   G+ A           +L   E G L L LH L+++     + FE   +   EEDL D+      VS+Q+ +++RM  S+PFL
Sbjct:  353 QAIFEEVVLNQKPE-IQDAMALLDTKQSLRRMLADFVKDTNPNISQTDMSRIMDEMDMSVVSLQYEKQLAGAVRNLITGDIVRMLLIQVQFIKKELMVAMGAIDELMHANQLNLQILATIPTFLVFGGLYKLVTSAFHMIYKRMSDRLYYDSSEIAGFLRNNLRDIERLLNKQNRGAVVGDDA-----------VLGVRELGFLILLLHQLRDLFEAYRTLFEEEEQERFEEDLDDLIGEGLLVSQQLAVIQRMYHSHPFL 601          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig650.17490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G625_ECTSI1.670e-8564.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1C8_9PHAE2.650e-6954.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2D9_9STRA1.280e-5343.45ATP synthase regulation protein NCA2-domain-contai... [more]
W7TDI7_9STRA3.660e-4035.69Nuclear control of ATP synthase 2 n=2 Tax=Monodops... [more]
A0A024GNH7_9STRA3.570e-3337.16Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A8K1CMR2_PYTOL5.460e-3335.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4BLQ4_HYAAE1.280e-3235.47Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
F0W8C8_9STRA2.350e-3237.12Uncharacterized protein AlNc14C236G9393 n=1 Tax=Al... [more]
A0A2D4CDF1_PYTIN1.750e-3136.06VOC domain-containing protein n=1 Tax=Pythium insi... [more]
A0A3M6VUA8_9STRA3.280e-3135.25Uncharacterized protein n=1 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig650contigF-serratus_M_contig650:62628..66894 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score294.7
Seed ortholog evalue5.5e-77
Seed eggNOG ortholog2880.D7G625
KEGG koko:K18158
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0016020,GO:0019867,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0098588,GO:0098805
EggNOG free text desc.Nuclear control of ATPase protein
EggNOG OGs28M9W@1,2QQIS@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Exons6
Model size989
Cds size984
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932010.7873542-UTR-F-serratus_M_contig650:62627..626321622932010.7873542-UTR-F-serratus_M_contig650:62627..62632Fucus serratus maleUTRF-serratus_M_contig650 62628..62632 +
1690964101.352006-UTR-F-serratus_M_contig650:62627..626321690964101.352006-UTR-F-serratus_M_contig650:62627..62632Fucus serratus maleUTRF-serratus_M_contig650 62628..62632 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932010.8336256-CDS-F-serratus_M_contig650:62632..629701622932010.8336256-CDS-F-serratus_M_contig650:62632..62970Fucus serratus maleCDSF-serratus_M_contig650 62633..62970 +
1690964101.3634531-CDS-F-serratus_M_contig650:62632..629701690964101.3634531-CDS-F-serratus_M_contig650:62632..62970Fucus serratus maleCDSF-serratus_M_contig650 62633..62970 +
1622932010.8515139-CDS-F-serratus_M_contig650:63448..635661622932010.8515139-CDS-F-serratus_M_contig650:63448..63566Fucus serratus maleCDSF-serratus_M_contig650 63449..63566 +
1690964101.3718123-CDS-F-serratus_M_contig650:63448..635661690964101.3718123-CDS-F-serratus_M_contig650:63448..63566Fucus serratus maleCDSF-serratus_M_contig650 63449..63566 +
1622932010.8680696-CDS-F-serratus_M_contig650:65022..650911622932010.8680696-CDS-F-serratus_M_contig650:65022..65091Fucus serratus maleCDSF-serratus_M_contig650 65023..65091 +
1690964101.3804758-CDS-F-serratus_M_contig650:65022..650911690964101.3804758-CDS-F-serratus_M_contig650:65022..65091Fucus serratus maleCDSF-serratus_M_contig650 65023..65091 +
1622932010.8836536-CDS-F-serratus_M_contig650:65562..657381622932010.8836536-CDS-F-serratus_M_contig650:65562..65738Fucus serratus maleCDSF-serratus_M_contig650 65563..65738 +
1690964101.3944829-CDS-F-serratus_M_contig650:65562..657381690964101.3944829-CDS-F-serratus_M_contig650:65562..65738Fucus serratus maleCDSF-serratus_M_contig650 65563..65738 +
1622932010.9032326-CDS-F-serratus_M_contig650:66047..661381622932010.9032326-CDS-F-serratus_M_contig650:66047..66138Fucus serratus maleCDSF-serratus_M_contig650 66048..66138 +
1690964101.4051588-CDS-F-serratus_M_contig650:66047..661381690964101.4051588-CDS-F-serratus_M_contig650:66047..66138Fucus serratus maleCDSF-serratus_M_contig650 66048..66138 +
1622932010.928998-CDS-F-serratus_M_contig650:66702..668941622932010.928998-CDS-F-serratus_M_contig650:66702..66894Fucus serratus maleCDSF-serratus_M_contig650 66703..66894 +
1690964101.4151456-CDS-F-serratus_M_contig650:66702..668941690964101.4151456-CDS-F-serratus_M_contig650:66702..66894Fucus serratus maleCDSF-serratus_M_contig650 66703..66894 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig650.17490.1prot_F-serratus_M_contig650.17490.1Fucus serratus malepolypeptideF-serratus_M_contig650 62633..66894 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig650.17490.1

>prot_F-serratus_M_contig650.17490.1 ID=prot_F-serratus_M_contig650.17490.1|Name=mRNA_F-serratus_M_contig650.17490.1|organism=Fucus serratus male|type=polypeptide|length=328bp
MDVTYSTIAAMQAPTVSRFLLGTARGVLPLPMIRESCTSRCFGLRCVAAD
FTVTVAVAMLLGDGQAIAKQILFRERQSFLVDEAAFHDAEASLRNMLRDF
VNERKNKVPEELRDNVVAAMDMSVVSRALEKETRGAIRGTVSGRIPRMLL
IQTTFLKKELLQAMGGIDELYQANQVTLRLISTLPAALVIAGVFKVTTVL
LLAAFSRRLEPTTLVHRSMRTLVREIERLLTSSSGFEGGEGARRAEGWTA
GAGLLDDEETGKLALFLHTLQNILRQNSSRFEARVRRGLEEDLSDMSQGR
ASVSRQMEIVRRMQRSYPFLRPEGGKR*
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mRNA from alignment at F-serratus_M_contig650:62628..66894+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig650.17490.1 ID=mRNA_F-serratus_M_contig650.17490.1|Name=mRNA_F-serratus_M_contig650.17490.1|organism=Fucus serratus male|type=mRNA|length=4267bp|location=Sequence derived from alignment at F-serratus_M_contig650:62628..66894+ (Fucus serratus male)
CGATAATGGATGTCACGTACAGTACTATTGCCGCAATGCAAGCGCCTACT GTTTCTCGATTTCTCCTCGGCACGGCGCGAGGTGTCTTGCCTCTGCCGAT GATCCGCGAGTCTTGCACATCGCGATGCTTTGGGTTGCGGTGTGTTGCCG CCGACTTCACAGTAACCGTGGCCGTCGCCATGCTTCTTGGAGATGGGCAG GCTATAGCGAAGCAGATTTTGTTCCGGGAGCGGCAGTCTTTCCTGGTGGA CGAAGCGGCGTTCCACGATGCAGAAGCGAGCCTTCGGAACATGCTCCGCG ACTTCGTTAACGAGAGGAAAAACAAGGTGCCCGAAGAGCTCAGGTGAGGA TCGCGTGCAAGGGATGGAGACGAGGAGGAGGGAGTTGTGGGAGAGGACTC AGCGTTTTGTCGTCGAGCTTTCGCTTCCCGTTCGGTGTGGTGTGGTGTGG GCTTGTGAGGGGCCCGCGTTCGATCGGGAAGGCGTTCAAAAGTAAGTAAA AAGTCGCACAGGCGCGGGTAAACGTGATAAAGGGGATATCAAGGACATAC GCGAAACACAACCTATCTAATCGCCGGGAGCCCGAGGTAACGGGATGCAA GTTTAGCGTTATCGGTACGTGTCTTGTGACGGAAGACCAAAGCGATCAGC GATTACGGCGCATTTCCCTCGCGAGGATGGACCGGGTCTCTTTGGAGTCT GCCCGTCCTTTTCCCGTGTTATTTTTGCCCGATGCGGCAGCGTTTGTTCT TCTGCACTGTGTCGGTACTGCGGAGATGTACGATACCGCGCCTTGTGTGC GCCTGTCGTGTCGTGTAACAGGGACAATGTAGTCGCCGCCATGGACATGT CGGTCGTCAGCCGGGCGCTGGAGAAGGAGACCCGAGGCGCCATCCGTGGC ACCGTGAGCGGGAGGATTCCCCGGATGCTGCTCATCCAGGCGCGTACACG AGCAGTTTCTAACTTCCAGATTTCTCGAAGTGAACCCCCCCGACCCGACC CCCTGATTTTATCCCAACGACTTATCTCCACAGTACTGTTAAGCCTCGGA ATGCGGCGGGTTTTCGGGCATTTTTACCCCGGGAAATCGTACAACGACCA ATTTGGTGCAATATGAGCGTAACCAATCATGAGTGCGTATAATTGAACGG CCCGGCTGGACTGTCAGAGTTTAAATGTTAATTTGTGCGCCCAAAATATC TCGAGCGCACCAAACAACCCACTCTACACCAGCAGAGAAGCAGCGGCGGA ACCAGCAGCAGCCAAACTGCTGAGGTTGCGCAGATCGAACCTAACATGAG CGATAGGCTTCCTTCAGCAGCGATTTCGGTTTCCGCAGTCCTGAACGCTG CTGCTGCCTCAGAGACACCAATACACGCCAATTTTATTGGGTATCTCTTT CACATACTCCATCTCGCCAACATGAAAGCTCGCGAGAGCCCGTATTGTCT AGACCCGTTGGGAACGGGATCGTGGTTGCACTGTTGCACCCTCTGCCCCA GCAATAGCTTTTCTCCCTCTTAACTTTGCTACCCGTAGCTTGTGGGAACG GAACACGCCCCTTCTGCTCGAAAACGTGTCCCGGGCTTTTTTGGGCAGCT TTTTTTTTTACGTGGGTGACAGCGCTCGCAGATTTTTTCCTTTCCATGGA GGTCCCTAAACTGCTCAACTTCTGTCGCTGGGTTCTCGGAATCCATGCCG GCGATCATAACTCTGTTTGTCTTGCTGCGTCCCTCGTAACCCAATCCACA AGTTAAGTTGAGAGCTTACCACCGTTCTCTTTCCGCTTGGTACAAGATTG AGaGTAACAGTAACATATGTCCCAAAATACCGATATTTTTCCACTTTTCT CCCTACCGATAGAAATGTACAAAACAATGTTCGACGCATTCGGTAGTATA TAGCGTTGTGTATGTAACTTCCGAGCGGAACGAACCAACTCGTCCCCAGT ATCGAGAAAAAATAGTGCACAATTTTTTATCTGAAGAGCATAGTATTCCT AATATATATGAAAAGTTTGGCGGAGGCGATCTTTCGCCGGGGAAAATTGA ATTTGGGGTGGTCGCTGTACGCTTTTTTTGTCTTAGGGTCTCCATCCCTC TTGAACACTGGTGAAAAGCCTCTTGAATACTCCTTACTCACATGCCTCCC TCGAGTACAAAATCCTTTAAGAAACCCCTTACCTCAATTGCGCTGACAAA CAATTATGATACACCCCTTACCCCCCCTCCTCCTCCCCCGGATAAATATC TCCCTCTCCATCATAGTCTTGTACAAAATGTCTTCCCCAAGGCCACCTCG ACAGTGCTTGTGGAAAACCTAACGATACCCTCTATCCCCCCCTCCTCCAA TTCTCTCGCGCCCACGTAAACTTTTCGGATCCCTTTCCCCAAAAGACCAC CTTCCTGAAGAAAGAACTCCTGCAGGCGATGGGGGGCATCGACGAACTGT ACCAAGCCAATCAGGTGACGTGCGTGTCCACGATGCGAGGTGGTCCTCTG ACCACGAAGAAACTAACGACAGATACTGCTAATTACCGCACATCTTGTGG TAAGACTCTACCGTACGTAGTGCGTTGAGACTTGCACGGCCCGTGATATT GAGCACCCTCCACTCGACGGTCGAATCCACGCACGGCGGGCTGCTGCAGC CGTGGCGCAAACCAGAGCCTGAAACGACTACTTTTTCATTTTCTCTACAA AGATTCTCCGTGTGCTGCATTGGAAAAAGACAGGCGGGCCGCTTGCGCCA GCTCAAAAAGGTGTACCTGGTAGCCCTTTTGAGTGCGTATCGTTGGGGCG AGAAAGTCATGTAATATTACACTGAAACCTCTACTGTAATACCTTATCGG TTCTGTTGCTCCGCTTGCCAACCGCTTGCCAAGCCCTCCGTCCTACTACT GTATGAATCCGTCGATTTGCCGGTCGTCCTCGCAGGTTACCCTGAGGTTG ATCTCTACATTGCCAGCGGCGCTTGTGATCGCCGGGGTGTTCAAGGTCAC TACCGTGTTGTTGCTTGCGGCTTTCTCCCGGCGGCTGGAGCCAACCACTC TGGTTCATCGCTCCATGCGCACGCTGGTCCGGGAGATTGAGCGCTTGCTG ACGTCGAGCAGGTGCTTTAAAAAGCACACAAGCAAAGCGCGCGCACACAC ACACACGTGCTACTCTTGTACGCTTACCCCAATGAGCGCGAGACCTGCGA AGGGGTTCCCCCCTCCTCTGACTCTAGTGTAGTATTAATAGACATTTTTC TGCTTTTTGTATTTTTCTTTCTTTGATAGTGCATTCGGAGACCCTTCAAA CGATTCAATCCGGCACCGAATACCGCGCCACACTAACGAAGCCTCGGCCG GAAAGTGATTGTAGAAATCGTCGTTTCTGTCGTGTAACATCATGGTCCTA TGCGATGGCTCTTTGACCAGCGGTTTCGAGGGGGGCGAAGGTGCCAGGCG TGCGGAAGGATGGACCGCGGGCGCGGGATTGTTGGACGACGAAGAGACGG GCAAGCTTGCGGTGAGCTAAACGATTCTTGGGAAGGATTTCTTCCTTAAT CCTCTTTCGCGAGTGACCAACATGCTACCGTAGCACGTGCATCGTTGCGT TCCTTGCGGTGGTTTCATGCGTCCCCTAGGACATGCCTCGTTTGCGGTTG CTATACGCATCCCCCCCTTATCCCAATCACAACGGTTCCGCTCGTGCCCA TACTGCTTATCGCGTACTAACGTAATCACTGTGTGGGTCGGATTCGGACG GACGAGATCCTTGCCTTTCTCGTGTGCTTCCGTAGATGTTTACGTCGTTC CTACGCGTTTCTTGCCGACCGGATAGCGTCTCCGCCTTCACGCATACACA CATCGGTCCCAGCCAACCGAAGGGTTCAACCAATTGCACGGGAACATAAC TCAAGACATATATACTACAGTGGTTGTAGGTGCACGAGCCTTCCGCGAAC TGCCCCCGATGAAGGTCATGTCCGACCGAGTTGTTCCTTACGCTCCCCTC TTCTTTGTTTGGTCAATGGACGGTGAACTGCGCTTGCCTTTCGCCTCTTA AATTCCGTGCCCCGCGGGAGCGCAGTTGTTCCTCCACACGCTGCAGAACA TCCTGAGGCAGAACAGCTCTCGCTTCGAGGCGCGGGTGCGCCGCGGCTTG GAAGAGGACCTGTCGGACATGTCCCAGGGGCGCGCTAGCGTGTCGCGGCA AATGGAGATCGTTCGTCGAATGCAGCGTTCGTACCCTTTCCTCCGACCGG AGGGAGGGAAACGTTGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig650:62628..66894+

>mRNA_F-serratus_M_contig650.17490.1 ID=mRNA_F-serratus_M_contig650.17490.1|Name=mRNA_F-serratus_M_contig650.17490.1|organism=Fucus serratus male|type=CDS|length=1968bp|location=Sequence derived from alignment at F-serratus_M_contig650:62628..66894+ (Fucus serratus male)
ATGGATGTCACGTACAGTACTATTGCCGCAATGCAAGCGCCTACTGTTTC
TCGATTTCTCCTCGGCACGGCGCGAGGTGTCTTGCCTCTGCCGATGATCC
GCGAGTCTTGCACATCGCGATGCTTTGGGTTGCGGTGTGTTGCCGCCGAC
TTCACAGTAACCGTGGCCGTCGCCATGCTTCTTGGAGATGGGCAGGCTAT
AGCGAAGCAGATTTTGTTCCGGGAGCGGCAGTCTTTCCTGGTGGACGAAG
CGGCGTTCCACGATGCAGAAGCGAGCCTTCGGAACATGCTCCGCGACTTC
GTTAACGAGAGGAAAAACAAGGTGCCCGAAGAGCTCAGATGGATGTCACG
TACAGTACTATTGCCGCAATGCAAGCGCCTACTGTTTCTCGATTTCTCCT
CGGCACGGCGCGAGGTGTCTTGCCTCTGCCGATGATCCGCGAGTCTTGCA
CATCGCGATGCTTTGGGTTGCGGTGTGTTGCCGCCGACTTCACAGTAACC
GTGGCCGTCGCCATGCTTCTTGGAGATGGGCAGGCTATAGCGAAGCAGAT
TTTGTTCCGGGAGCGGCAGTCTTTCCTGGTGGACGAAGCGGCGTTCCACG
ATGCAGAAGCGAGCCTTCGGAACATGCTCCGCGACTTCGTTAACGAGAGG
AAAAACAAGGTGCCCGAAGAGCTCAGGGACAATGTAGTCGCCGCCATGGA
CATGTCGGTCGTCAGCCGGGCGCTGGAGAAGGAGACCCGAGGCGCCATCC
GTGGCACCGTGAGCGGGAGGATTCCCCGGATGCTGCTCATCCAGGGACAA
TGTAGTCGCCGCCATGGACATGTCGGTCGTCAGCCGGGCGCTGGAGAAGG
AGACCCGAGGCGCCATCCGTGGCACCGTGAGCGGGAGGATTCCCCGGATG
CTGCTCATCCAGACCACCTTCCTGAAGAAAGAACTCCTGCAGGCGATGGG
GGGCATCGACGAACTGTACCAAGCCAATCAGACCACCTTCCTGAAGAAAG
AACTCCTGCAGGCGATGGGGGGCATCGACGAACTGTACCAAGCCAATCAG
GTTACCCTGAGGTTGATCTCTACATTGCCAGCGGCGCTTGTGATCGCCGG
GGTGTTCAAGGTCACTACCGTGTTGTTGCTTGCGGCTTTCTCCCGGCGGC
TGGAGCCAACCACTCTGGTTCATCGCTCCATGCGCACGCTGGTCCGGGAG
ATTGAGCGCTTGCTGACGTCGAGCAGGTTACCCTGAGGTTGATCTCTACA
TTGCCAGCGGCGCTTGTGATCGCCGGGGTGTTCAAGGTCACTACCGTGTT
GTTGCTTGCGGCTTTCTCCCGGCGGCTGGAGCCAACCACTCTGGTTCATC
GCTCCATGCGCACGCTGGTCCGGGAGATTGAGCGCTTGCTGACGTCGAGC
AGCGGTTTCGAGGGGGGCGAAGGTGCCAGGCGTGCGGAAGGATGGACCGC
GGGCGCGGGATTGTTGGACGACGAAGAGACGGGCAAGCTTGCGCGGTTTC
GAGGGGGGCGAAGGTGCCAGGCGTGCGGAAGGATGGACCGCGGGCGCGGG
ATTGTTGGACGACGAAGAGACGGGCAAGCTTGCGTTGTTCCTCCACACGC
TGCAGAACATCCTGAGGCAGAACAGCTCTCGCTTCGAGGCGCGGGTGCGC
CGCGGCTTGGAAGAGGACCTGTCGGACATGTCCCAGGGGCGCGCTAGCGT
GTCGCGGCAAATGGAGATCGTTCGTCGAATGCAGCGTTCGTACCCTTTCC
TCCGACCGGAGGGAGGGAAACGTTGATTGTTCCTCCACACGCTGCAGAAC
ATCCTGAGGCAGAACAGCTCTCGCTTCGAGGCGCGGGTGCGCCGCGGCTT
GGAAGAGGACCTGTCGGACATGTCCCAGGGGCGCGCTAGCGTGTCGCGGC
AAATGGAGATCGTTCGTCGAATGCAGCGTTCGTACCCTTTCCTCCGACCG
GAGGGAGGGAAACGTTGA
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