mRNA_F-serratus_M_contig65.17466.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: D8LMK0_ECTSI (DUF547 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMK0_ECTSI) HSP 1 Score: 177 bits (449), Expect = 3.680e-49 Identity = 81/122 (66.39%), Postives = 98/122 (80.33%), Query Frame = 1
Query: 1 CKLLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPD-GVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFWGKSA 363
CKLLLSFG++LN RLHYSFGD+ N+ELPH++FPLL SVDSL+CTP+G+E P LGK F+E + KASR+RGE G+ F+TGCTY FSFHSMYIDM +WSTCKIP+M D L FWG +A
Sbjct: 596 CKLLLSFGQKLNRRLHYSFGDNDNAELPHISFPLLTSVDSLVCTPEGQEVPALGKSFEEDKDRKASRRRGEEDKALGIGDFQTGCTYSFSFHSMYIDMAQWSTCKIPVMRDIDLHTFWGNAA 717
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A6H5KCR6_9PHAE (DUF547 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR6_9PHAE) HSP 1 Score: 176 bits (445), Expect = 1.270e-48 Identity = 82/122 (67.21%), Postives = 97/122 (79.51%), Query Frame = 1
Query: 1 CKLLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASP-DGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFWGKSA 363
CKLLLSFG++LN RLHYSFGD N+ELPH++FPLL SVDSLICTP+G+E P LGK F+E +SKASR+RGE G+ F+TG TY FSFHSMYIDM +WSTCKIP+M D L FWG +A
Sbjct: 486 CKLLLSFGQKLNRRLHYSFGDKDNAELPHISFPLLTSVDSLICTPEGQEVPALGKTFEEDKDSKASRRRGEEDKASGIGDFQTGFTYSFSFHSMYIDMAQWSTCKIPVMRDIDLHTFWGNAA 607
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A061RNH2_9CHLO (PH domain-containing protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RNH2_9CHLO) HSP 1 Score: 130 bits (327), Expect = 9.820e-33 Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 CKLLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFWGKSA 363
C +LL F K++N LHYSFGDS NSELPH+ FPL + D L+ TP GE+PP LG P ES S+ +R R PD D T CTY FSF+SMYID+ +W C +P+M D L FW SA
Sbjct: 61 CNVLLGFVKKINKTLHYSFGDSQNSELPHIVFPLWSNCDRLVVTPAGEQPPELGVPVVESEGSRHARAR-TPKPDAYD---TSCTYTFSFNSMYIDLQRWKLCNLPMMKDMDLTTFWSDSA 177
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A836CIV3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIV3_9STRA) HSP 1 Score: 107 bits (268), Expect = 4.940e-28 Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query: 1 CKLLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKW 300
C+ +LSF +RLN +HYSFG NSELPH++FPL+ +VD+L+ TP GE PP LG+ F E K R G+A P SF CTY FSFHSMY+ + W
Sbjct: 11 CRAMLSFAQRLNRNMHYSFGSKDNSELPHISFPLVTNVDTLLVTPQGEAPPPLGQRFVEDPVLKKERMSGKAGPA---SFSLDCTYTFSFHSMYLSLPAW 107
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A024G744_9STRA (DUF547 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G744_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.470e-23 Identity = 51/118 (43.22%), Postives = 73/118 (61.86%), Query Frame = 1
Query: 7 LLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFWGKS 360
++L K+L ++HYSFGDS N ELPH+AFPL +VD CTP G+ P LG + T + ++K ++ P G ++FK G TY F FH+MY+D+ W T IP ++D L F+ S
Sbjct: 268 MVLGIIKKLVGKIHYSFGDSKNHELPHIAFPLFQTVDQFTCTPKGQLAPQLGVQVIQET--EQAQKHRKSVPVGQETFKVGPTYTFHFHTMYVDLHHWKTVNIPGINDMKLSTFFNSS 383
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: F0WAH8_9STRA (Uncharacterized protein AlNc14C46G3703 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAH8_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.110e-23 Identity = 49/118 (41.53%), Postives = 76/118 (64.41%), Query Frame = 1
Query: 7 LLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFWGKS 360
++L K+L ++HYSFGDS + ELPH+AFPL +VD ICTP+G+ P LG ++ ++ +RK ++ G ++F+ G TY F FH+MY+D++ W T IP ++D L F+ S
Sbjct: 268 MVLGIIKKLVGKIHYSFGDSKDQELPHVAFPLYQTVDQFICTPEGQVAPQLG--VEDIQETEQARKLRKSVLVGQEAFQVGPTYTFHFHTMYVDLLHWKTVNIPGINDMKLSTFFDSS 383
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: I2CS80_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS80_NANGC) HSP 1 Score: 83.6 bits (205), Expect = 2.150e-18 Identity = 44/105 (41.90%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 7 LLLSFGKRLNSRLHYSFGDSSNS-------ELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKW 300
++L+F +R+ LHYSFGD ELPHL FPL +D L+ TP G+EPP LGK F E ++ R+ G+ F G Y SFHSMY+D +W
Sbjct: 13 MVLAFARRVLKNLHYSFGDKGGEAVEAEQVELPHLTFPLSRGMDRLVVTPAGQEPPPLGKEFNEPDETRVPRRGGKGKEP---EFVLGPIYSMSFHSMYLDFSQW 114
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A0L0DNA4_THETB (PH domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DNA4_THETB) HSP 1 Score: 84.7 bits (208), Expect = 1.120e-16 Identity = 47/102 (46.08%), Postives = 59/102 (57.84%), Query Frame = 1
Query: 43 LHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKPFQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLF 348
LH SFG +SELPH+ FPL MSVD I TP GE PP L T+ + + +R A D D+F T TY SFHS +D+++W KIP +SD L F
Sbjct: 209 LHSSFGTRDDSELPHIVFPLTMSVDRYIVTPPGESPPDLCVMMLPGTDDENAARRKNARID--DTFTTTDTYTLSFHSANLDLVQWKAVKIPGLSDLELTSF 308
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A067CPY5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPY5_SAPPC) HSP 1 Score: 79.0 bits (193), Expect = 3.370e-15 Identity = 47/122 (38.52%), Postives = 65/122 (53.28%), Query Frame = 1
Query: 1 CKLLLSFGKRLNSRLHYSFG----DSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKP-FQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFW 351
C++LL S LHY FG + ELPH++FPL +SVD TP+G PP LG+ F E+ + +A+R + G +F T TY FSFHS Y+D +W +P + L FW
Sbjct: 116 CRVLLPILHLRVSGLHYCFGRLQAPDTAKELPHISFPLHLSVDEFHRTPEGHTPPRLGQDVFGETDDERAARYAAK----GEYAFNTRDTYTFSFHSEYVDFERWQLVNVPGLPSVPLETFW 233
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Match: A0A024TKU8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TKU8_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.160e-14 Identity = 43/110 (39.09%), Postives = 59/110 (53.64%), Query Frame = 1
Query: 25 KRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPPVLGKP-FQESTNSKASRKRGEASPDGVDSFKTGCTYHFSFHSMYIDMIKWSTCKIPIMSDTSLRLFW 351
+R H FGD + E PH FPL +VD ++ T G PP LG+ F ES +R+R +P G +SF TY F FH+MY+D+ KW+ +P M D L F+
Sbjct: 206 RRFLGTTHVGFGD--HIERPHCVFPLYQTVDEMVVTSHGAAPPTLGQVHFGESP---VARQRRRLTPLGTESFHVNSTYTFQFHTMYVDLAKWTIVNVPGMQDVHLTTFF 310 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig65.17466.1 >prot_F-serratus_M_contig65.17466.1 ID=prot_F-serratus_M_contig65.17466.1|Name=mRNA_F-serratus_M_contig65.17466.1|organism=Fucus serratus male|type=polypeptide|length=121bp CKLLLSFGKRLNSRLHYSFGDSSNSELPHLAFPLLMSVDSLICTPDGEEPback to top mRNA from alignment at F-serratus_M_contig65:369921..372892+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig65.17466.1 ID=mRNA_F-serratus_M_contig65.17466.1|Name=mRNA_F-serratus_M_contig65.17466.1|organism=Fucus serratus male|type=mRNA|length=2972bp|location=Sequence derived from alignment at F-serratus_M_contig65:369921..372892+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig65:369921..372892+ >mRNA_F-serratus_M_contig65.17466.1 ID=mRNA_F-serratus_M_contig65.17466.1|Name=mRNA_F-serratus_M_contig65.17466.1|organism=Fucus serratus male|type=CDS|length=726bp|location=Sequence derived from alignment at F-serratus_M_contig65:369921..372892+ (Fucus serratus male)back to top |