mRNA_F-serratus_M_contig65.17461.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: D8LMJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ5_ECTSI) HSP 1 Score: 502 bits (1292), Expect = 1.130e-166 Identity = 271/556 (48.74%), Postives = 322/556 (57.91%), Query Frame = 2
Query: 770 PKKGNERIGDKKLAARAAPVAKRSGRPIQTITGSDRPKKLETPPWAKRACFKRCNCAHGVPADSTAFVRLEEGRTVQHDAVGSVTIRTYTFDGEGREFENRPPLASVPPPPYALRLFLEYMDPRTVARCARTSPEWRRECYAQTETGKPIHPAYAGVHFMELESSFVACENKIDGMFFHQPPRDDGGQLFTAGQRSVSAWRRLETPETTHAEKSAASQGIATAACLLDSLAPFTKGATEHDVEVSWQMVGVAVRDTAPFTKIRPVNNRRGHYLSHLRSRIICCSSNGSIREWSMAHDVKNTRFLAQMWEHHGRITDVAFAAPSAGYCKIHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAISDFHLYAGTSNGCIVVFALERVCLRPERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVWNIPEAKLGHGELRTFRQHKRAITALAITDAHLFSASDEGHVRIWSLGTLELQRIIAHEWRIKCIWVHHAPAESPEAGKGTLFLGLSTGSVLTYPITDAV 2437
PKKG +GD+ LAARAA +AK +G +Q +TG R + ETPPWA+ ACF+RCNC HGVP DSTAFV L+EGR ++H+AVG VT+RT +G EFENRPPL PPPPY LRLFLEYMD RTVARCA TS EW RECY + E G P+HPAY G+HFMEL S AC++KIDGMFFHQPP GQLFTAGQR V+AWRR ET T E+S AS+G + S ++G +EVSWQ GV +RDTAPFT I PVN+R + +MA NT W+ AF APS G+CK HGAP HSCYMYSVSDDR LKVWDL++K CLHT+KP++SDCGT VWN+P+A GH ++ TFR+HKRAITAL++T AHLFSASDEGHV + + RIKCIWVHHAP +SP+ G G+LFLGL+TG VL YPITDAV
Sbjct: 102 PKKGLLGLGDR-LAARAAAIAKTAGNALQAVTGEGR--RRETPPWARAACFRRCNCNHGVPTDSTAFVPLQEGRKLEHEAVGVVTVRTEPLEGAELEFENRPPLERTPPPPYVLRLFLEYMDSRTVARCAHTSKEWHRECYQRNEEGVPMHPAYIGMHFMELGSQVDACQDKIDGMFFHQPPTGSPGQLFTAGQRRVTAWRRQETEVDTEREQSTASEGSGSTKSGESSETSHSEGDAAPRIEVSWQSAGVCLRDTAPFTMILPVNSRPR-------------------KNPNMAFHSANTSSCFLAWQ--------AFTAPSVGFCKAHGAPQHSCYMYSVSDDRYLKVWDLATKDCLHTVKPKISDCGT------------------------------------------------------------------------------------VWNVPKASFGHTKVCTFREHKRAITALSLTKAHLFSASDEGHV-------------VRQDRRIKCIWVHHAPPDSPDPGNGSLFLGLATGLVLAYPITDAV 530
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A6U4D539_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D539_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.710e-49 Identity = 117/345 (33.91%), Postives = 177/345 (51.30%), Query Frame = 2
Query: 1328 GQLFTAGQRSVSAWRRLETPETTHAEKSAASQGIATAACLLDSLAPFTKGATEHDVEVSWQMVGVAVRDTAPFTKIRPVNNRRGHYLSHLRSRIICCSSNGSIREWSMAHDVKNTRFLAQMWEHHGRITDVAFAAPSAG-----YCKIHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAISDFHLYAGTSNGCIVVFALERVCLRPERHECHLHDEPRW-FCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVWNIP-EAKLGHGELRTFRQHKR--AITALAITDAHLFSASDEGHVRIWSLGTLELQRIIAHEWRIKCIW 2335
G+L+TAG + V W LET E CL + AVR+TA I+ VN ++ C+SNGSIR+WS+ H+ KN ++A WEH I D + P +C+ ++YSVSDDR++KVWD + K CL ++ P CGT++SVA S HLY G+SNG I V+ L+R C R +RH C + + FC Q L+HG+ + + CGG + K+L++A+ +GT +VW++P ++ H LR H A++ T AHLF+A + +R+W+L T+ELQ+++ E KC++
Sbjct: 225 GRLYTAGDKRVKVWN-LETYE-----------------CLAE-----------------------AVRETAVINDIQVVNGA-----------LLVCASNGSIRQWSLTHNPKNIAYVAAYWEHRSWINDFIPSEPEPDDDGEMFCR---------FLYSVSDDRTVKVWDANKKVCLFSMDPPNRTCGTMRSVARSARHLYVGSSNGVIYVYPLKRECDREDRHGCSISEHGALPFCLQTELQHGKGIILQLECGGYRRQVKHLYSASTDGTFRVWSLPGKSGYEHECLRVIDAHAPGGALSCFCTTWAHLFTAGQDKVIRVWNLHTMELQKVLHPEELCKCMY 508
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: F0YAL2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL2_AURAN) HSP 1 Score: 125 bits (314), Expect = 2.380e-26 Identity = 81/275 (29.45%), Postives = 134/275 (48.73%), Query Frame = 2
Query: 1619 SSNGSIREWSMAHDVKNTRFLAQMWEHHGRITDVAF--AAPSAGYCKIHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAISDFHLYAGTSNGCIVVFALERVCLR-PERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVWNIPEAKLGHGELRTFRQHKRAITALAITDAHLFSASDEGHVRIWSLG-----TLELQRIIAHEWRIKCIWVHHAPAESPEAGKGTLFLGLSTGSVLTY 2419
S NG+IREWS+ H++ N F QMWEH+ I D+ A P+ G G Y+ + SDDR+++VW+ C I+P C T++++ +S HLY G+S+G + V+A++ R + + E + E E L +GEE V I K L+ A+ +G ++VW +P L + + T H + IT + ++ H + SD+ +R + L L+R + R+KC+ + G + GL+ G VL +
Sbjct: 299 SHNGAIREWSLPHNLTNIEFRVQMWEHNAVINDIVSTDANPNFG-----GMTQEMPYICTCSDDRTVRVWNPVQHNCDAVIRPFNHHCATMRTLFVSKDHLYVGSSDGVVYVYAVDGSTRSLANRQKKRVGVEATYPLEVE-LSNGEEVVSAIKMSKERTKDARLYVASWDGKLRVWTVPRDDLEYELVFTLEHHGQRITEVLVSHRHFITCSDDETIRYYGLCHGDAYDTALERKVECGSRVKCL-------SATPGDPGVMLAGLADGRVLVF 560
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A7S2H458_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H458_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.990e-24 Identity = 77/290 (26.55%), Postives = 124/290 (42.76%), Query Frame = 2
Query: 1217 IHPAYAGVHFMELESSFVACENKIDGMFFHQPPRDDGGQLFTAGQRSVSAWRRLETPETTHAEKSAASQGIATAACLLDSLAPFTKGATEHDVEVSWQMVGVAVRDTAPFTKIRPVNNRRGHYLSHLRSRIICCSSNGSIREWSMAHDVKNTRFLAQMWEHHGRITDVAFAAPSAGYCKIHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAISDFHLYAGTSNGCIVVFALERV-CLRPERHECHLHDEPRWFCEQETLKHGE-EPVQHIVCGG 2080
+ P Y + +E F A E ++ G+ ++ G+ +T G + V W+ + A+ E + V D P T + + ++ SSNG++R W+M H +K A MWEH+ + D + H +++ SDDR++K WDL +C HT++P T++SVA+SD L+ G S G I V+ + CLR +RHEC++ PR +C Q+TL+ E + V IV GG
Sbjct: 25 VQPHYDDMKRFGVEMKFTAHEKRVKGVVSYR------GRCYTGGDKCVKVWK--------------------------------LQRASAESEEFDRVELIHTVHDLCPVT-----------FCQEIDGNLLVGSSNGAVRMWTMPHSIKKMNQRAVMWEHNALVHDAS-----------HWQRGKFSTLFTASDDRTIKAWDLHQVRCEHTLEPLDRRGATMRSVAVSDSFLFVGHSRGVIYVYLTDTSSCLREDRHECYIS--PRPYCLQKTLQDTEGQIVSSIVVGG 252
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A1I8M9B2_MUSDO (Uncharacterized protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8M9B2_MUSDO) HSP 1 Score: 64.7 bits (156), Expect = 3.800e-7 Identity = 53/192 (27.60%), Postives = 85/192 (44.27%), Query Frame = 2
Query: 1601 SRIICCSSNGSIREWSMAHDVKNTRFLAQMW---EHHGRITDVAFAAPSAGYCKIHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAIS--DFHLYAGTSNGCIVVFALERVCLRPERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVWNIPEAKL 2161
S + C +G++ W++A V + LA ++ +H +TDV GA YM++VS DRS K++DL+S T+ V LQSVA++ + ++ GT++G I F + V P E H + P+ C G + C K L + A + + VWNI +L
Sbjct: 139 SHFVSCGKDGAVLVWNLARVVAHEENLAPLYTFNDHGLPVTDVYV-----------GAGGMRGYMFTVSLDRSCKIYDLNSG----TLLLSVVFAEGLQSVAVNALETQVFVGTNSGSIFDFFVNDV---PRVKEYHFEEAPKQLC-------GHTKPSSVNCLSISADGKTLISGASDSQVLVWNISSRQL 305
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: I1K066_SOYBN (Uncharacterized protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1K066_SOYBN) HSP 1 Score: 63.2 bits (152), Expect = 7.510e-7 Identity = 64/233 (27.47%), Postives = 99/233 (42.49%), Query Frame = 2
Query: 1754 IHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAIS-DFHLYAGTSNGCIVVFALERVCLRPERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVWNIPEAKLGHGELRTFRQHKRAITALAITDAHLFSASDEGHVRIWSL-------GTLELQRII-AHEWRIKCIWVHHAPAESPEAGKGTLFLGLSTGSVLTYPI 2425
+ G + +MYSVS DRS KVWDL S +CL ++K + +VA++ D +Y +++G I ++ E +RH+ T + V + G GG LF+ +G + W K G ++ T R H AI L L SAS + VRIW G + ++ HE +K + V + E G TLF G G + + +
Sbjct: 131 VSGLAVNQRFMYSVSWDRSFKVWDLLSYRCLESVKAHED---AINAVAVNGDGTVYTASADGSIKIWRREGEA---KRHKL-----------VSTTGRRKSTVNALALDGGGGAG--LFSGGCDGEICRWEC--GKNGVVKMETLRGHGGAILCLIHVAGLLASASADLTVRIWRRERESSGDGGYCCRAVLEGHEKPVKSL-VAFSDGEGDSNGVVTLFSGSLDGEIRVWRV 341
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A835Z1Z8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z8_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 8.920e-7 Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 2
Query: 2120 NGTMKVWNIPEAKLGHGELRTFRQ------HKRAITALAITDAHLFSASDEGHVRIWSLGTLELQRIIAHEWRIKCIWVHHAPAESPEAGK-----------GTLFLGLSTGSVLT 2416
+G++ VW P + GH R R AIT +A+ +AH+ SA D G VRI+S GTL LQR++ R+K + + PA + A G L+LGLS G+V T
Sbjct: 3 DGSLWVWAAPRRRFGHRG-RALRSGGXXXXXGAAITHIAVGNAHVLSADDAGEVRIYSAGTLRLQRVLRAGARVKSVCLRQ-PAAAATAXXXXXXXRGGDDGGRLYLGLSDGTVAT 116
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A8B8MNS0_ABRPR (protein JINGUBANG-like n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8MNS0_ABRPR) HSP 1 Score: 61.6 bits (148), Expect = 4.070e-6 Identity = 59/232 (25.43%), Postives = 96/232 (41.38%), Query Frame = 2
Query: 1754 IHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAISDFHL-YAGTSNGCIVVFALERVCLRPERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVWNIPEAKLGHGELRTFRQHKRAITALAITDAHLFSASDEGHVRIW-------SLGTLELQRIIAHEWRIKCIWVHHAPAESPEAGKGTLFLGLSTGSVLTYPI 2425
+ G + MYSVS D+S K+WDLS +CL ++K + +VA++D + Y +++GCI V+ + DE + T+ + V + G G LF+ +GT+ W + ++ R H AI L L S S + VRIW S G + HE +K + V + E G T+F G G++ + +
Sbjct: 278 VSGLAVNQKLMYSVSWDKSFKIWDLSRYQCLESVKAHED---AINAVAVNDDGIVYTASADGCIKVWKRD--------------DEVKRHALVSTVGKQKSTVNALALDGDGTA---LFSGGCDGTICRWESKCEENDVVKVEKLRGHSGAILCLIHVAGLLVSGSADLTVRIWQRERGGGSSGYCCRVVLEGHEKPVKSL-VAFSGGEGNSNGVVTVFSGSLDGNIKVWEV 488
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A1S2Z6G5_CICAR (protein JINGUBANG-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2Z6G5_CICAR) HSP 1 Score: 60.8 bits (146), Expect = 4.480e-6 Identity = 52/177 (29.38%), Postives = 80/177 (45.20%), Query Frame = 2
Query: 1754 IHGAPAHSCYMYSVSDDRSLKVWDLSSK-KCLHTIKPRVSDCGTLQSVAIS-DFHLYAGTSNGCIVVFALERVCLRPERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVW-NIPEAKLGHGEL-RTFRQHKRAITALAITDAHLFSASDEGHVRIW 2272
+ G + +MYSVS D+S K+WDLSS +CL ++ + +V +S D +Y +++GCI V+ ++ D+ + + T+ + V + G G LF+ +GT+ W N E K L T R H AI L D L S S + VRIW
Sbjct: 136 VSGLAVNEKFMYSVSWDKSFKIWDLSSGYRCLESVNAHED---AINAVVVSNDGTVYTASADGCIKVWKMD--------------DKVKRYVLMSTIGKQKSNVNALALDGDGTA---LFSGGSDGTICRWENKCEEKENDVVLIETMRGHSGAILCLVNVDDLLASGSADLTVRIW 292
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Match: A0A7N0TRB6_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TRB6_KALFE) HSP 1 Score: 60.8 bits (146), Expect = 5.600e-6 Identity = 58/214 (27.10%), Postives = 88/214 (41.12%), Query Frame = 2
Query: 1661 VKNTRFLAQMWEHH-GRITDVAFAAPSAGYCKIHGAPAHSCYMYSVSDDRSLKVWDLSSKKCLHTIKPRVSDCGTLQSVAISDFHLYAGTSNGCIVVFALERVCLRPERHECHLHDEPRWFCEQETLKHGEEPVQHIVCGGTGGKCKYLFTAARNGTMKVW---NIPEAKLGHGEL---RTFRQHKRAITALAITDAHLFSASDEGHVRIWSLG 2281
VK R + + W HH ++ +A ++ A +YSVS DRSLKVW S +C+ ++ D VA D ++ G+++ I V+ +R E H ETL V + G L++ A + ++ VW N A L G + R H +AI L + LFS S +G VR+W G
Sbjct: 164 VKVRRHVRRTWVHHVDAVSALALSSDKA-------------LLYSVSWDRSLKVWRTSDFRCVESVVNAHDDAVNAVVVA-GDGRVFTGSADKMIKVWRRQRSEEGVEEHRV-----------VETLTKHRSAVNALALSRDGS---VLYSGACDRSILVWSDKNATGAALSGGGMVVVGALRGHTKAILCLCVVGDLLFSGSADGTVRVWRRG 349 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig65.17461.1 >prot_F-serratus_M_contig65.17461.1 ID=prot_F-serratus_M_contig65.17461.1|Name=mRNA_F-serratus_M_contig65.17461.1|organism=Fucus serratus male|type=polypeptide|length=690bp MIREECASFSWHCTRCKDENTNNQQFCNKCFAPRRDTNRGPRETCRTCLHback to top mRNA from alignment at F-serratus_M_contig65:307799..324340+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig65.17461.1 ID=mRNA_F-serratus_M_contig65.17461.1|Name=mRNA_F-serratus_M_contig65.17461.1|organism=Fucus serratus male|type=mRNA|length=16542bp|location=Sequence derived from alignment at F-serratus_M_contig65:307799..324340+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig65:307799..324340+ >mRNA_F-serratus_M_contig65.17461.1 ID=mRNA_F-serratus_M_contig65.17461.1|Name=mRNA_F-serratus_M_contig65.17461.1|organism=Fucus serratus male|type=CDS|length=4140bp|location=Sequence derived from alignment at F-serratus_M_contig65:307799..324340+ (Fucus serratus male)back to top |