mRNA_F-serratus_M_contig65.17458.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: D8LMK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK2_ECTSI) HSP 1 Score: 378 bits (970), Expect = 3.350e-127 Identity = 197/317 (62.15%), Postives = 233/317 (73.50%), Query Frame = 3
Query: 168 MRSCTRSRWAFYTYLALA-LALRCTGLAPALTMSAAPNQSKTIVSRAGFFKAAAISLVGAGLGIGT----VGRP-MEQVEAL-EPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDMTENYGRQYNDLRGKYAEDGRMEETGCPER 1097
M + T SR Y +AL L LRC+G TM+AAP T SR F K+AAI ++GAG+GI VGRP +E EA +PLVETYWGNGCFWHVQ EM++AE +LGRS DELT+YAGY GA++ KLCYHN RG+ DYGKAGAAEVVSV IP SK+P+F+ AYFDMFV+YDNGAGR+F+DRRDPQ DRGGEYRSLLGVPGGL G MA PIK+ A RGLAL+ G+GGDPDTLMRN VFVMDT FPF+KGE+YHQFHNDM+E+YGR+YN+LR +YAE+G M+ETGCPE+
Sbjct: 1 MPNSTGSRLVSYASVALTTLLLRCSGF----TMTAAPKGPPTSASRGDFLKSAAIGILGAGVGISAASVAVGRPVLESAEAAADPLVETYWGNGCFWHVQREMIRAEQAILGRSTDELTSYAGYGGAKKNFQGDKLCYHNMRGIGDYGKAGAAEVVSVTIPSSKLPEFSKAYFDMFVKYDNGAGRIFMDRRDPQ--------------------DRGGEYRSLLGVPGGLSGPMADPIKQEAAARGLALREGNGGDPDTLMRNTVFVMDTATFPFFKGEIYHQFHNDMSEDYGRKYNNLRKQYAEEGTMQETGCPEK 293
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A7S0AHU9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AHU9_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.300e-65 Identity = 118/283 (41.70%), Postives = 160/283 (56.54%), Query Frame = 3
Query: 267 AAPNQSKTIVSRAGFFKAAAISLVGAGLGI----GTVGRPME-QVEALEPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDM-TENYGRQYNDLRGKYAEDGRMEETGCPER 1097
AA ++ R F +AA + G+ + P AL L + Y+G GCFWH+QHE V+AE LLGR ELT+ GYAG + +G++CYHN + + DYGK G EVV + +P+S + DFA YFD+F +R DP DRGGEYRSL+G+PGG++ A ++ AT +G+ L+ G G DPDTL R V+V DT +FPFY+GE YHQFHND + YG++YNDL + EDGR++ TGCP+R
Sbjct: 2 AAKPEASAAAGRRDFLASAATTAASLAFGLPAAASLIANPQPANAGALGDLTDVYFGVGCFWHIQHEFVEAERKLLGRGDKELTSLTGYAGGKSTDKEGRVCYHNFQSIADYGKLGHGEVVGMKLPESSIGDFAKEYFDLFTPKG--------ERVDPM--------------------DRGGEYRSLIGLPGGVNHPRYAEVEAAATAKGMKLEEGKGNDPDTLGRKLVYVYDTAKFPFYQGEAYHQFHNDFQSPAYGKKYNDLAKEAVEDGRVKVTGCPDR 256
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A6U3BKH7_9EUKA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6U3BKH7_9EUKA) HSP 1 Score: 215 bits (547), Expect = 2.950e-63 Identity = 117/265 (44.15%), Postives = 165/265 (62.26%), Query Frame = 3
Query: 333 LVGAGLGIGTVGR--PMEQVEALEPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGL----ALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDM-TENYGRQYNDLRGKYAEDGRMEETGCPERGLL 1106
L+ G+ G GR E+++ E ++E Y+G GCFWHVQHEMV+ E +L R +LT+ GYAG ++ GK+CYHN R V DYG+ G AEVV+V IP+S + DF+ YF++FV+Y+ G +DR DPQ D+G EYRS+LG+PGG+ M A + E A K L +L G G +PDTL++ +V+VMD+ +FPF+ E+YHQFH+D + YG+ YN+LR ++GR+ ETGCPE G+L
Sbjct: 69 LMATGMLFGGKGRRSAAEELQQDETMMEAYFGCGCFWHVQHEMVELEEKVLSRRGKQLTSLTGYAGGKKLGDGGKVCYHNMRQVADYGRLGHAEVVNVNIPRSNLKDFSKRYFELFVKYEL-PGVTIVDRADPQ--------------------DKGPEYRSVLGIPGGVRSPMFAEV-EAACKEVLGSEWSLMEGHGNEPDTLLKRRVYVMDSNKFPFHPAEVYHQFHDDFQSPPYGKDYNNLRAVMKKEGRISETGCPE-GML 310
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A7S1GME3_CYCTE (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME3_CYCTE) HSP 1 Score: 213 bits (542), Expect = 3.620e-63 Identity = 104/251 (41.43%), Postives = 148/251 (58.96%), Query Frame = 3
Query: 354 IGTVGRPMEQVEAL--EPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDMTEN-YGRQYNDLRGKYAEDGRMEETGCPER 1097
I T G + A E L + Y+G GCFWH+QHE ++AE +LGR+ EL+A AGYAG + +G++CYHN +G+ DYG+ G EVV + +P++K+ DFA YFD+F N + V DRGGEYRSL+G+PGG++ + +++ +G+ L G G DPDT+ + V+V DT+EFPFY+ E+YHQFH+D YGR YN + EDGR++ TGCP+R
Sbjct: 39 IATAGATISSSAATAEENLTDVYFGVGCFWHIQHEFIEAERSILGRTNKELSALAGYAGGSKTGKEGRVCYHNFQGIADYGRLGHGEVVGMKLPEAKISDFAKVYFDLF-----------------------------RNGERVDPMDRGGEYRSLIGLPGGMNHPLYPEVEKAGIAKGMKLVAGKGNDPDTIGKKLVYVYDTSEFPFYQAEVYHQFHDDFQSRPYGRSYNYIVNDLLEDGRIQGTGCPDR 260
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A7S2M6J5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M6J5_9STRA) HSP 1 Score: 210 bits (535), Expect = 5.450e-62 Identity = 115/276 (41.67%), Postives = 154/276 (55.80%), Query Frame = 3
Query: 273 PNQSKTIVSRAGFFKAAAISLVGAGLGIGTVGRPMEQVEALEPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHND-MTENYGRQYNDLRGKYAEDGRMEETGCPER 1097
PN+ TI R F A + + A + P A + L YWG GC+WHVQHE + AE +LGR +ELT+ GYAG + +G++CYHN + + DYGK G EVV + IP+SKV DFA YF +F D G +R DP D+GGEYRSLLG+PGG A ++ RG+ L G G DPDTL + V+V D+ +FPFY+ E YHQ+HND +T YG++YN+L +DGR++ TGCP+R
Sbjct: 25 PNKPTTISHRRAFLSKIAGATIAATSAVTL--NPNSASAADDNLQNVYWGAGCYWHVQHEFILAERSILGRKDNELTSLTGYAGGFKTDSEGRVCYHNFQSIADYGKFGHGEVVGMTIPESKVEDFAVEYFKLFG--DKG------ERADPM--------------------DKGGEYRSLLGLPGGSKHPAFAQVEAAGKARGMTLVDGKGNDPDTLGKRLVYVYDSNKFPFYQAEFYHQYHNDFLTPAYGKEYNNLAEAALDDGRIKITGCPDR 270
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A8J5XES5_DIALT (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XES5_DIALT) HSP 1 Score: 207 bits (526), Expect = 1.440e-60 Identity = 112/234 (47.86%), Postives = 142/234 (60.68%), Query Frame = 3
Query: 414 YWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDM-TENYGRQYNDLRGKYAEDGRMEETGCPERGLLGF 1112
Y+G GCFWHVQHE V+ E LL R+ EL++ GYA +GK+CYHN RGV DYGK G AE V++ IP S +PDFA YF +FV Y+ GR +R DPQ DRG EYRS+LG+PGG+ A I E A + L G G +PDTL++ V+VMD+ EFPF+ E YHQFHND + YGR YNDLR + A+ G++ +TGCP G +GF
Sbjct: 66 YFGCGCFWHVQHEFVQLERSLLKRADLELSSRCGYAAGSLLGENGKVCYHNLRGVADYGKLGHAEAVAMRIPPSALPDFAKLYFSLFVSYNLLPGREIFERADPQ--------------------DRGPEYRSVLGLPGGVRSVYFAQI-ERANGNKMKLVEGKGDEPDTLLKRTVYVMDSDEFPFFPAEPYHQFHNDFQSPPYGRVYNDLRQQLADAGKLPDTGCPG-GPIGF 277
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A7S4K336_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K336_9STRA) HSP 1 Score: 206 bits (523), Expect = 2.870e-59 Identity = 118/267 (44.19%), Postives = 149/267 (55.81%), Query Frame = 3
Query: 300 RAGFFKAAAISLVGAGLGIGTVGRPMEQVEALEPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDM-TENYGRQYNDLRGKYAEDGRMEETGCPER 1097
RA AAA SL G V P A L + Y+G GCFWH+QHE V AE LLGRS ELT+ GYAG + GK+CYHN + V DYGK G EVV + IP+S + DFA YF F NG +R DP DRGGEYRSL+G+PGG + ++E A+ +G+ L+ G G DPDT + V+V DT ++PFY+GE+YHQFHND + YG+ YN L +DGR+ TGCP+R
Sbjct: 49 RAFLASAAAASLASLG-----VAAPAPANAADSNLQDVYFGVGCFWHIQHEFVLAERNLLGRSDKELTSRTGYAGGTKTGDGGKVCYHNLQFVADYGKLGHGEVVGMTIPESSIGDFAKEYFSYFA--PNG------ERVDPG--------------------DRGGEYRSLIGLPGGTSHPEYSKVEEAASAKGMRLEPGKGNDPDTFGKKLVYVYDTAKYPFYQGEVYHQFHNDFQSPPYGKAYNKLADMAFDDGRLGVTGCPDR 282
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A448YZ63_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZ63_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.570e-58 Identity = 113/269 (42.01%), Postives = 153/269 (56.88%), Query Frame = 3
Query: 297 SRAGFFKAAAISLVGAGLGIGTVGRPMEQVEALEPLVETYWGNGCFWHVQHE-MVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDM-TENYGRQYNDLRGKYAEDGRMEETGCPER 1097
SR ++AA GA LGI + + PL Y+G GCFWH+QHE +V+ E G+LGR + T+ AGYAG + +G++CYHN GV DYGK G EVV + IP+SK+ DF+ YF ++ DR DP DRG EYRSL+G+PGG+ ++ A K G L G G DPDTL + V+V D+T+FPFY+GE+YHQ+HND + YG++YN+L EDGR++ TGCP+R
Sbjct: 46 SRRNLLRSAAALSAGALLGIANAEIAVADDDVDTPL---YFGVGCFWHIQHEFVVQGEKGILGRGPHQFTSAAGYAGGKSTDKEGRVCYHNFSGVADYGKLGHGEVVGMNIPQSKIGDFSELYFSLY-------NPKTKDRVDPM--------------------DRGAEYRSLIGLPGGMKHTSYPLVESAAEKAGFKLVEGKGNDPDTLGKQIVYVYDSTKFPFYQGEVYHQYHNDFQSPAYGKEYNNLVEVALEDGRIKGTGCPDR 284
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A7S2L8U9_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L8U9_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.820e-58 Identity = 107/241 (44.40%), Postives = 140/241 (58.09%), Query Frame = 3
Query: 378 EQVEALEPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDM-TENYGRQYNDLRGKYAEDGRMEETGCPER 1097
E A L + Y+G GCFWH+QHE V AE LLGR+ ELT+ GYAG + +GK+CYHN DYGK G EVV + IP++ + DFA YFD+F +R DP D+GGEYRSLLG+PGG M ++ A +G+ L G G DPDTL + V+VMD+ +FPFY+ E+YHQFHND + YG+ YNDL +DGR+++TGCP+R
Sbjct: 75 ESAAASSKLTDVYFGVGCFWHIQHEFVVAEQRLLGRNGKELTSRTGYAGGTKTE-NGKVCYHNFSFQADYGKLGHGEVVGMTIPEASIGDFAKEYFDLFTSKG--------ERVDPM--------------------DKGGEYRSLLGLPGGTSHPMYPQVEAAAAAKGMTLALGKGNDPDTLGKKLVYVMDSNKFPFYQAEVYHQFHNDFQSPAYGKAYNDLVKDAFDDGRVKDTGCPDR 286
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Match: A0A7S2LKS5_9DINO (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LKS5_9DINO) HSP 1 Score: 199 bits (506), Expect = 2.380e-58 Identity = 101/233 (43.35%), Postives = 135/233 (57.94%), Query Frame = 3
Query: 396 EPLVETYWGNGCFWHVQHEMVKAEMGLLGRSKDELTAYAGYAGARRAPGDGKLCYHNRRGVDDYGKAGAAEVVSVMIPKSKVPDFANAYFDMFVRYDNGAGRVFLDRRDPQICHPLKSRTINENAKIVPHQDRGGEYRSLLGVPGGLDGAMAAPIKEVATKRGLALQGGSGGDPDTLMRNKVFVMDTTEFPFYKGELYHQFHNDMTENYGRQYNDLRGKYAEDGRMEETGCPE 1094
E V ++GNGCFWHVQHE+VK E+G LGR +TA +GYAG + G++CYHNR+ DYG+ G EVV+V P+ KV +FA AYFD A R DPQ D G EYRS +G+PGG+DG + + EVA + L G G D DT+ KV++ ++ EFPFY+GE+YHQFH+DM E Y +Y+ L+ + G ++E GCPE
Sbjct: 12 ETAVNVFFGNGCFWHVQHEVVKKEVGALGRDGSSITALSGYAGGTQVGSKGRVCYHNRQAAPDYGQMGHTEVVNVSFPEGKVGEFARAYFD-------SASSYVFGRTDPQ--------------------DMGPEYRSAIGLPGGMDGPLFKQV-EVANAGRMELLRGKGNDDDTVGTKKVWIYNSDEFPFYQGEVYHQFHDDMLERYSERYHSLKRAMQDRGTLKEVGCPE 216 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig65.17458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig65.17458.1 >prot_F-serratus_M_contig65.17458.1 ID=prot_F-serratus_M_contig65.17458.1|Name=mRNA_F-serratus_M_contig65.17458.1|organism=Fucus serratus male|type=polypeptide|length=316bp MRSCTRSRWAFYTYLALALALRCTGLAPALTMSAAPNQSKTIVSRAGFFKback to top mRNA from alignment at F-serratus_M_contig65:202841..213603- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig65.17458.1 ID=mRNA_F-serratus_M_contig65.17458.1|Name=mRNA_F-serratus_M_contig65.17458.1|organism=Fucus serratus male|type=mRNA|length=10763bp|location=Sequence derived from alignment at F-serratus_M_contig65:202841..213603- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig65:202841..213603- >mRNA_F-serratus_M_contig65.17458.1 ID=mRNA_F-serratus_M_contig65.17458.1|Name=mRNA_F-serratus_M_contig65.17458.1|organism=Fucus serratus male|type=CDS|length=1896bp|location=Sequence derived from alignment at F-serratus_M_contig65:202841..213603- (Fucus serratus male)back to top |