mRNA_F-serratus_M_contig6498.17454.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5KNG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG1_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.140e-22 Identity = 74/195 (37.95%), Postives = 106/195 (54.36%), Query Frame = 1
Query: 328 KVTRTKQMIRDAFARAEADERSGQPGRQVLEGILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAVRNRSAVPFGSVDELLDSLGDLTMNRTPATAVTRLG------PR-----------RSAGGAASGSAHSGNVFPVGGKGKKLKL 861
K TKQ++ A ++ SG G L+ +LRA+C GLS T LQQLQ F VP T+F +L +L++ V +V+ V +D T+QVAVKA + DQ+ATL A +F RN A+P+ S++ L+++L D+T N T ATA RL PR R GG + A SG++ P G G + +
Sbjct: 71 KSAATKQILVAAVNQSVRAMDSGMSGPDALQLLLRAVCSGLSTVTPALVLQQLQNFAVPAGTTFKAYLEDLKVLVESVQMVGFA--EDGTLQVAVKAGVTDQYATLTAPVFHGRNTQALPYDSLESLMEALDDMTDNTTTATASVRLRGVGSVLPRGQADMSVSSRGRYGGGGSFSGAKSGSLTPQGSAGARAVM 263
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5JI85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI85_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.610e-19 Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 403 GRQVLEGILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAVRNRSAVPFGSVDELLDSLGDLTMNRTPATAVTRL 768
G L +LR++C GLS T LQQLQ F VP T+F +L EL++ V +V+ V +D T+QVAVKA + DQFATL A +F RN A+P+ ++D+L+ +L D+ N T AT+ TR+
Sbjct: 136 GPDALTMVLRSVCGGLSKVTSALVLQQLQNFAVPAGTTFKAYLEELKVLVESVQLVGFA--EDGTLQVAVKAGVTDQFATLTAPVFHGRNTQALPYDNLDDLMAALEDMIENTTTATSSTRV 255
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5KZQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZQ9_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.480e-19 Identity = 60/143 (41.96%), Postives = 87/143 (60.84%), Query Frame = 1
Query: 328 KVTRTKQMIRDAFARAEADERSGQPGRQVLEGILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAVRNRSAVPFGSVDELLDSLGDLTMNRTPATA 756
K TKQ++ A ++ SG G L+ +LRA+C GLS T LQQLQ F VP T+F +L +L++ V +V+ V +D T+QVAVKA + DQ+AT A +F RN A+P+ S++ L+++L D+T N T ATA
Sbjct: 1122 KSAATKQILVAAVNQSVRATDSGMSGPDALKLLLRAVCSGLSTVTPALVLQQLQNFAVPAGTTFKAYLEDLKVLVESVQMVGFA--EDGTLQVAVKAGVTDQYATCTAPVFHGRNTQALPYDSLESLMEALDDMTDNTTTATA 1262
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5KFF1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFF1_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.130e-18 Identity = 63/153 (41.18%), Postives = 89/153 (58.17%), Query Frame = 1
Query: 403 GRQVLEGILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAVRNRSAVPFGSVDELLDSLGDLTMNRTPATAVTRLGPRRSAGGAASGSAHSGNVFPVGGKGKKLKL 861
G L +LR++C GLS T LQQLQ F VP T+F +L EL++ V +V+ V +D T+QVAVKA + DQFATL A +F RN A+P+ +D+L+ + D+ N T AT+ TR+ R G A S G V GG+G +++
Sbjct: 426 GPDALTMVLRSVCGGLSEVTSALVLQQLQNFAVPVDTTFKAYLEELKVLVESVQLVGFA--EDGTLQVAVKAGVTDQFATLTAPVFHGRNTQALPYDKLDDLMVAFEDMIENTTTATSSTRV---RGVGSAVS----RGPVVASGGRGVDMEV 569
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5JVS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS0_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 5.080e-18 Identity = 52/115 (45.22%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 424 ILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAVRNRSAVPFGSVDELLDSLGDLTMNRTPATAVTRL 768
+LR++C GLS T LQQLQ F VP T+F +L EL++ V +V+ V +D T+QVAVKA + DQFATL A +F RN A+P+ +D+L+ +L + N T AT+ TR+
Sbjct: 2 VLRSVCGGLSEVTSALVLQQLQKFAVPVGTTFKAYLEELKVLVESVQLVGFA--EDGTLQVAVKAGVTDQFATLTAPVFHGRNTQALPYDKLDDLMAALEYMIENTTTATSSTRV 114
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5K255_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K255_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 6.260e-8 Identity = 39/104 (37.50%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 403 GRQVLEGILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAV----RNRSAVPFGSVD 702
G++ L + AL +S + + + LQTF VP T ++++LT L+ V NV+++A+V P D+T+Q+AV+ S+ DQ++ L AS+F RN AV G D
Sbjct: 459 GKKALAFLTSALGRVVSSSSPEKLVYDLQTFAVPTGTPYSEYLTTLQGLVHNVRNLAIVTPQDNTIQLAVRESVSDQYSVLTASVFKGKELGRNFKAVKGGGKD 562
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Match: A0A6H5K0Q4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q4_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 3.520e-7 Identity = 49/169 (28.99%), Postives = 82/169 (48.52%), Query Frame = 1
Query: 343 KQMIRDAFARAEADERSGQPGRQVLEGILRALCLGLSPFTQHQALQQLQTFEVPEKTSFADFLTELRIAVMNVKDVALVPPDDSTMQVAVKASIDDQFATLAASIFAVRNRSAVPFGSVDELLDSLGDLTMNRTPATAVTRLGPRRSAGGAASGSAHSGNVFPVGGKGK 849
++ I F+ G GR+ L + AL ++ + + + LQTF VP T + ++LT L+ NV+++ALV P D+T+Q+AV+ + DQ++ L AS+ + V F D+ M + ++ R G +R GG +GS GN F G+
Sbjct: 10 REKIGKVFSDTSKKIEEGSTGRKALAFLTSALGRVVNSSSPEKVVYDLQTFAVPTGTPYREYLTTLQGLGHNVRNLALVTPQDNTIQLAVREIVSDQYSVLTASVCKGKELGVVQF-------DNXPTRRMAQVKGSSGGRQG-QRCDGGGRTGSG-GGNTFRSASPGR 169 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6498.17454.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6498.17454.1 >prot_F-serratus_M_contig6498.17454.1 ID=prot_F-serratus_M_contig6498.17454.1|Name=mRNA_F-serratus_M_contig6498.17454.1|organism=Fucus serratus male|type=polypeptide|length=273bp MAKGTRDEKTGPIPKRGKTKGKAAGQRESAGPSVPSQDIPSAVDDAHPCSback to top mRNA from alignment at F-serratus_M_contig6498:22516..26708+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6498.17454.1 ID=mRNA_F-serratus_M_contig6498.17454.1|Name=mRNA_F-serratus_M_contig6498.17454.1|organism=Fucus serratus male|type=mRNA|length=4193bp|location=Sequence derived from alignment at F-serratus_M_contig6498:22516..26708+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6498:22516..26708+ >mRNA_F-serratus_M_contig6498.17454.1 ID=mRNA_F-serratus_M_contig6498.17454.1|Name=mRNA_F-serratus_M_contig6498.17454.1|organism=Fucus serratus male|type=CDS|length=1638bp|location=Sequence derived from alignment at F-serratus_M_contig6498:22516..26708+ (Fucus serratus male)back to top |