prot_F-serratus_M_contig6497.17452.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig6497.17452.1
Unique Name	prot_F-serratus_M_contig6497.17452.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	87

Homology

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BLAST of mRNA_F-serratus_M_contig6497.17452.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 5.880e-15
Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 0

Query:    4 SIIVLLSCGVGYFVYAHPHCHYDQREVDLERDLTFCSMDYAPKGVCCTEAEETALEETFNAVGDLTAECADYYKQMLCGVCGTY 87
            SI ++L   +     +HP C+ D R  D +  L FC    A  G CCT+AEE  ++    AVG+LT +C D YKQ++CGVCG+Y
Sbjct:    9 SIAIMLLGALITLCASHPLCYVDDRPTDPDEILEFCPE--AQSGACCTDAEEALVQLRHEAVGNLTGDCDDLYKQVVCGVCGSY 90

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig6497.17452.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig6497.17452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G6T7_ECTSI	5.880e-15	42.86	WSC domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..87
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.665

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig6497	contig	F-serratus_M_contig6497:17139..17802 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig6497.17452.1	mRNA_F-serratus_M_contig6497.17452.1	Fucus serratus male	mRNA	F-serratus_M_contig6497 17139..17862 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig6497.17452.1 ID=prot_F-serratus_M_contig6497.17452.1|Name=mRNA_F-serratus_M_contig6497.17452.1|organism=Fucus serratus male|type=polypeptide|length=87bp
MLKSIIVLLSCGVGYFVYAHPHCHYDQREVDLERDLTFCSMDYAPKGVCC
TEAEETALEETFNAVGDLTAECADYYKQMLCGVCGTY