prot_F-serratus_M_contig6480.17427.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6480.17427.1
Unique Nameprot_F-serratus_M_contig6480.17427.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length163
Homology
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: D8LKE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE8_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.260e-70
Identity = 113/163 (69.33%), Postives = 127/163 (77.91%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLVSFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            GIGE+GELGR VC+MKVPP PGS+EEP YDF GI RDHLTP  MYR+  +DG A  RM+ VKAIGCG++HS++VTR D+ VY CGLNSYGQLGLGDT NRK L +V  L   N M VAGG  HSLVLT EGL SFGR DSGQLGCT  ++  DWGAFET PME
Sbjct:  289 GIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAA-EDGGA--RMENVKAIGCGDFHSLLVTRADADVYACGLNSYGQLGLGDTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEGLFSFGRKDSGQLGCTAAINKGDWGAFETSPME 448          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: A0A7S3HMA8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HMA8_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.550e-32
Identity = 81/180 (45.00%), Postives = 102/180 (56.67%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPA--------------VVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGD--TRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEG-LVSFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE GELGR    MK+        E  YD   I + H+TPG MY S  K+G                + R+  VKA+GCG YHSMVV  GD  VY CGLN+YGQLGLGD  T  R +LT V  L  +  + + GG  HS+VL+  G L++FGR DSGQLG ++  S+K  G F   P+E
Sbjct:  229 GLGECGELGRFAPPMKIK----VNGEMEYDMLSILQHHITPGPMYISSGKEGKLAGTTGVGFNQDAQLLKRVTNVKALGCGAYHSMVVVVGDI-VYACGLNNYGQLGLGDNDTEARDYLTAVPLLQNKGIVALRGGMHHSVVLSSNGKLLTFGRGDSGQLGSSQA-STKSAGDFSGKPIE 402          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: A0A3R6Z7M6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Z7M6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.420e-30
Identity = 69/164 (42.07%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLV-SFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE+G LGR V AM++      + +  Y+ S +  DHLTP    + ++ +G +     G +A+G G YHS+ V     G+YTCGLN+YGQLGLG   N+  L +VE+L+ +N ++V GG  HS+VL  +G + +FGR DSGQLG   TL     G F+  P E
Sbjct:   35 GLGEMGNLGRPV-AMEI-----RDADGEYNVSLVFNDHLTP----QLVKFNGKSF----GCRALGAGSYHSLFVANESGGIYTCGLNNYGQLGLGHDVNQTELQLVEALSSKNGLLVEGGTHHSVVLVSDGTIYTFGRGDSGQLG---TLDDPCTGVFKDSPQE 181          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: A0A024TW52_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW52_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.680e-28
Identity = 69/164 (42.07%), Postives = 99/164 (60.37%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLV-SFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE+G LGR V AM++      + +  Y+ S +  DHLTP    + ++ +G +     G +A+G G YHS+ V     G+YTCGLN+YGQLGLG   N+  L +VE+L+ +N ++V GG  HS+VL  +G + +FGR DSGQLG   TL     G F+  P E
Sbjct:  279 GLGEMGNLGRPV-AMEI-----RDADGEYNVSLVFNDHLTP----QLVKFNGKSF----GCRALGAGSYHSLFVANESGGIYTCGLNNYGQLGLGHDVNQTELQLVEALSSKNGLLVEGGTHHSVVLVSDGTIYTFGRGDSGQLG---TLDDPCTGVFKDSPQE 425          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: A0A484EGS8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EGS8_BRELC)

HSP 1 Score: 117 bits (294), Expect = 6.820e-28
Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = 0
Query:    1 GIGELGELGRNVCA-MKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLV-SFGRNDSGQLGCTETLSSKDW 154
            G+GE+G+LGRNV A MK       + +  Y    + +DHL P  +  +   D   VV     KAIGCG YHS+ V      +YTCGLN+YGQLG+G T N   L +VE L+ +N   V GGA HS++LT  G V +FGR DSGQLG  E+ S+ D+
Sbjct:  280 GLGEMGQLGRNVDAEMK-------DSKGKYKLDMVYQDHLQPKLV--TFGNDSLPVV-----KAIGCGSYHSLFVLSSSGYLYTCGLNNYGQLGVGSTENCTELQLVEDLSAKNVAFVDGGAHHSVILTSTGDVYTFGRADSGQLGMLESCSTGDY 421          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: H3GSC6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC6_PHYRM)

HSP 1 Score: 117 bits (293), Expect = 8.800e-28
Identity = 73/165 (44.24%), Postives = 98/165 (59.39%), Query Frame = 0
Query:    1 GIGELGELGRNVCA-MKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLV-SFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE+G+LGR V A MK       + +  Y    + R+HL P  +   L KD   VV     KAIGCG +HS+  T  +  +Y+CGLN+YGQLG+G T N   L +VE L+ +N   V GG+ HS+VLT +G V SFGR DSGQLG  ET ++   G F+  P +
Sbjct:  279 GLGEMGQLGRKVDAEMK-------DSKGDYKVEMVFREHLAPKPVM--LGKDPLPVV-----KAIGCGSFHSLFATSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTNDGDVYSFGRADSGQLGTLETCNT---GEFKDRPQK 426          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: W4FZ97_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZ97_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.160e-27
Identity = 69/164 (42.07%), Postives = 91/164 (55.49%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEG-LVSFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE+G LGR V           +    Y  S +  DHLTP    + ++ +G       G KA+G G YHS+ V     G+Y+CGLN+YGQLGLG   N+  L +VE+L  +N + V GG  HS+VL  +G L +FGR DSGQLG   TL     GAF+  P E
Sbjct:  279 GLGEMGNLGRPVSTEI------RDAHGEYKLSVVFNDHLTP----QLVKLNGKPF----GCKALGAGSYHSLFVANDSGGIYSCGLNNYGQLGLGHDVNQTELQLVEALGSKNGLFVEGGTHHSVVLVTDGTLYTFGRGDSGQLG---TLDDPGTGAFKDSPQE 425          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: A0A6G0XT58_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT58_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.160e-27
Identity = 71/164 (43.29%), Postives = 97/164 (59.15%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEG-LVSFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE+G LGR V A ++    G      Y+   + +DHLTP    + ++ +G       G KA G G YHS+ V     G+YTCGLN+YGQLGLG   N+  L +VE+L+ +N ++V GG  HS+VL  +G + SFGR DSGQLG   TL +   GAF+  P E
Sbjct:  277 GLGEMGNLGRPV-ASEIRDAAGE-----YNVPLVYKDHLTP----QVIKLNGKPF----GCKAFGAGSYHSLFVHNESGGIYTCGLNNYGQLGLGHDINQTELQLVEALSDKNGLLVEGGTHHSVVLLSDGTMYSFGRGDSGQLG---TLENPATGAFKESPQE 423          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: D0N6R7_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6R7_PHYIT)

HSP 1 Score: 116 bits (291), Expect = 1.800e-27
Identity = 69/155 (44.52%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    1 GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLV-SFGRNDSGQLGCTETLSSKDW 154
            G+GE+G+LGR V           + +  Y    +  DHL P  +  +L  D   VV     KAIGCG YHS+     +  +YTCGLN+YGQLG+G+T N   L +VE L+ +N   V GG+ HS+VLTI+G V +FGR DSGQLG  ET S+ D+
Sbjct:  280 GLGEMGQLGRTVDDQM------KDFKGDYKVDMVYNDHLQPKPV--TLGNDPLPVV-----KAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCSTGDF 421          
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Match: A0A329SFA2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SFA2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.480e-27
Identity = 74/165 (44.85%), Postives = 96/165 (58.18%), Query Frame = 0
Query:    1 GIGELGELGRNVCA-MKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRKDGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNRKHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLV-SFGRNDSGQLGCTETLSSKDWGAFETLPME 163
            G+GE+G+LGR V A MK P       +  Y    +  +HL P  +      +GP  V    VKAIGCG YHSM     +  +YTCGLN+YGQLG+G+T N   L +VE L+ +N   V GG  HS+VLT +G V +FGR DSGQLG  ET S+   G F+  P +
Sbjct:  281 GLGEMGQLGRKVDAEMKDP-------KGDYRVDMVYTEHLQPKPVTLG---NGPLPV----VKAIGCGSYHSMFSLSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAFVDGGTHHSVVLTNDGDVYTFGRADSGQLGTLETCST---GEFKDRPQK 428          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6480.17427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKE8_ECTSI1.260e-7069.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3HMA8_9STRA7.550e-3245.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A3R6Z7M6_9STRA4.420e-3042.07Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024TW52_9STRA1.680e-2842.07Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A484EGS8_BRELC6.820e-2845.51Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3GSC6_PHYRM8.800e-2844.24Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W4FZ97_9STRA1.160e-2742.07Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A6G0XT58_9STRA1.160e-2743.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
D0N6R7_PHYIT1.800e-2744.52Regulator of chromosome condensation (RCC1)-like p... [more]
A0A329SFA2_9STRA2.480e-2744.85Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 132..148
score: 42.16
coord: 80..96
score: 48.04
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 80..127
e-value: 1.5E-9
score: 38.3
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 117..127
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 79..130
score: 12.534
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 36..162
e-value: 9.0E-26
score: 92.4
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 60..150
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 46..147
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 46..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6480contigF-serratus_M_contig6480:27171..28291 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6480.17427.1mRNA_F-serratus_M_contig6480.17427.1Fucus serratus malemRNAF-serratus_M_contig6480 27171..28292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6480.17427.1 ID=prot_F-serratus_M_contig6480.17427.1|Name=mRNA_F-serratus_M_contig6480.17427.1|organism=Fucus serratus male|type=polypeptide|length=163bp
GIGELGELGRNVCAMKVPPPPGSEEEPSYDFSGIARDHLTPGHMYRSLRK
DGPAVVRMKGVKAIGCGEYHSMVVTRGDSGVYTCGLNSYGQLGLGDTRNR
KHLTMVESLNGRNAMVVAGGAQHSLVLTIEGLVSFGRNDSGQLGCTETLS
SKDWGAFETLPME
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II