prot_F-serratus_M_contig648.17425.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig648.17425.1
Unique Nameprot_F-serratus_M_contig648.17425.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length258
Homology
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BLAST of mRNA_F-serratus_M_contig648.17425.1 vs. uniprot
Match: A0A6H5KVI2_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI2_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.650e-22
Identity = 77/189 (40.74%), Postives = 101/189 (53.44%), Query Frame = 0 
Query:   29 RRSDIYPNQHAP-----RIQRSCGWSICGVGNANSALELGAAPSD---HNIPQSPEKTFSND--MFGMMAPCWRLLERTKAHLDKDQLEYMRGLLLTHAKKPMRRDQLLERAESCLQKQGHILAAFVMVFDGI-----DPPPSMSLCPAKKRQAGPSPSSAPRKA--TTFTSTNCPPAAVSEHRGAGPY 200
            R+ +  P+ H       ++ R C     G G  + A   G++ S    + + + P++   N+   FG M PCW LLER  A++D+DQL YMRGLL+T+  KPM RDQLLERAESCLQ+Q  I  AFV VFD I     DPPP + L    KR    +P+  PR    T+FT    P A   E R    Y
Sbjct:  962 RQGERLPHSHVAVHVDAKVMRECAG---GSGRGHIASNGGSSSSGSGGYPLYRKPKEAAVNEDGEFGYMYPCWSLLERANAYMDQDQLVYMRGLLITNIHKPMTRDQLLERAESCLQEQPEIFMAFVKVFDRINHPYTDPPP-VPLYSGTKRPTPDTPAE-PRSVLRTSFTGRVLPTAGHIESRARASY 1145
[Close]
BLAST of mRNA_F-serratus_M_contig648.17425.1 vs. uniprot
Match: A0A6H5JLS8_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS8_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 9.780e-19
Identity = 45/68 (66.18%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:   84 FGMMAPCWRLLERTKAHLDKDQLEYMRGLLLTHAKKPMRRDQLLERAESCLQKQGHILAAFVMVFDGI 151
            FG MAPCWR LE   A +DKDQL YM+GL+ TH +KPM RDQLLERA+SCLQ Q  I  AFV  FD I
Sbjct: 1021 FGFMAPCWRQLEMAHAFIDKDQLRYMKGLITTHVRKPMTRDQLLERADSCLQGQPEIFVAFVKTFDRI 1088
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig648.17425.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVI2_9PHAE2.650e-2240.74ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JLS8_9PHAE9.780e-1966.18ELM2 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig648contigF-serratus_M_contig648:231736..233486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig648.17425.1mRNA_F-serratus_M_contig648.17425.1Fucus serratus malemRNAF-serratus_M_contig648 230305..233915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig648.17425.1 ID=prot_F-serratus_M_contig648.17425.1|Name=mRNA_F-serratus_M_contig648.17425.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MDLAASTPFVVQVRDAGLTAGQRRSIWGRRSDIYPNQHAPRIQRSCGWSI
CGVGNANSALELGAAPSDHNIPQSPEKTFSNDMFGMMAPCWRLLERTKAH
LDKDQLEYMRGLLLTHAKKPMRRDQLLERAESCLQKQGHILAAFVMVFDG
IDPPPSMSLCPAKKRQAGPSPSSAPRKATTFTSTNCPPAAVSEHRGAGPY
VPAPSSFWGDVGEHKTGHPNHANNSGADANRIPPGCAFSHSYPVTIMPEG
SSCLPRF*
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