mRNA_F-serratus_M_contig648.17421.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: D7G9E3_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E3_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.350e-23 Identity = 57/93 (61.29%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 991 EKTLSNDMFGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQLLERAESCLQKQGHIFAAFVTVFDRID----QPPSMSLYPAKK 1257
E+ L D+FG M PCW LLER +A+LD+DQLVYMRGL+L HV+KPM+R QLLERAESCL +Q +FAAFV FDR+D + P + YPA K
Sbjct: 843 EELLEQDVFGFMGPCWSLLERAQAYLDQDQLVYMRGLILRHVEKPMTRAQLLERAESCLAEQRQVFAAFVKTFDRVDLIHAEAPPVPFYPAMK 935
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: A0A6H5JX23_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX23_9PHAE) HSP 1 Score: 117 bits (293), Expect = 3.460e-23 Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 1
Query: 991 EKTLSNDMFGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQLLERAESCLQKQGHIFAAFVTVFDRID----QPPSMSLYPAKK 1257
E+ L D+FG M PCW LLE+ +A+LD+DQLVYMRGL+L HV+KPM+R QLLERAESCL +Q +FAAFV FDR+D + P + YPA K
Sbjct: 1048 EELLEQDVFGFMGPCWSLLEKAQAYLDQDQLVYMRGLILRHVQKPMTRAQLLERAESCLAEQPQVFAAFVKTFDRVDLIHAEAPPVPFYPAMK 1140
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: A0A6H5K0T4_9PHAE (BAH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T4_9PHAE) HSP 1 Score: 116 bits (291), Expect = 5.730e-23 Identity = 63/149 (42.28%), Postives = 87/149 (58.39%), Query Frame = 1
Query: 829 QRRSIWDRRSDTYPNRHAPRIQRSCARSICGVGNANSALELGAAPSDSNSPQALEKTLSN-----DMFGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQLLERAESCLQKQGHIFAAFVTVFDRIDQPPSMSLYPAKKR 1260
QRR++W S PN+H RS+ G + SD S + + S +FG MAPCW +LER A++D DQL YM+ L+L H+++PMSRDQLL+R +SCL +Q HI+ AFV +FD +DQ P M L+PA +R
Sbjct: 902 QRRTVWRPISTPAPNQHPSEGLSMPPRSVPG--------RVRDQRSDGGSDVVMAEGRSGFGGGEQVFGFMAPCWHILERAHAYMDPDQLSYMKSLILAHLRRPMSRDQLLKRVKSCLHEQQHIYTAFVKMFDHVDQTPLMPLFPATRR 1042
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: A0A6H5KVI2_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI2_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.800e-22 Identity = 78/183 (42.62%), Postives = 104/183 (56.83%), Query Frame = 1
Query: 850 RRSDTYPNRHAP-----RIQRSCARSICGVGNANSALELGAAPSDSNS----PQALEKTLSND-MFGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQLLERAESCLQKQGHIFAAFVTVFDRIDQP----PSMSLYPAKKRQAGPSPSSAPRQAM--TYTSTYAPPAAVSEHR 1350
R+ + P+ H ++ R CA G G + A G++ S S + E ++ D FG M PCW LLER A++D+DQLVYMRGLL+T++ KPM+RDQLLERAESCLQ+Q IF AFV VFDRI+ P P + LY KR +P+ PR + ++T P A E R
Sbjct: 962 RQGERLPHSHVAVHVDAKVMRECAG---GSGRGHIASNGGSSSSGSGGYPLYRKPKEAAVNEDGEFGYMYPCWSLLERANAYMDQDQLVYMRGLLITNIHKPMTRDQLLERAESCLQEQPEIFMAFVKVFDRINHPYTDPPPVPLYSGTKRPTPDTPAE-PRSVLRTSFTGRVLPTAGHIESR 1140
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: D8LCW0_ECTSI (ELM2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW0_ECTSI) HSP 1 Score: 112 bits (280), Expect = 1.130e-21 Identity = 52/71 (73.24%), Postives = 60/71 (84.51%), Query Frame = 1
Query: 1015 FGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQLLERAESCLQKQGHIFAAFVTVFDRIDQP 1227
FG M PCWRLLER A++D+DQLVYMRGLL+TH+ KPM+R QLLERAESCLQ+Q IF AFV VFDRI+ P
Sbjct: 831 FGFMYPCWRLLERANAYMDQDQLVYMRGLLVTHIHKPMTRAQLLERAESCLQEQPEIFMAFVKVFDRINHP 901
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: A0A6H5JLS8_9PHAE (ELM2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS8_9PHAE) HSP 1 Score: 106 bits (265), Expect = 7.720e-20 Identity = 67/150 (44.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 868 PNRHAPR--------IQRSCARSICGVGNANSALELGAAPS-DSNSPQALEKTLSNDMFGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQLLERAESCLQKQGHIFAAFVTVFDRIDQPPS----MSLYPAKKRQAGPSP 1278
P HAP+ +Q R+ G + S ++ G P+ D S A+++ + FG MAPCWR LE A +DKDQL YM+GL+ THV+KPM+RDQLLERA+SCLQ Q IF AFV FDRI + + LY +KR SP
Sbjct: 966 PPGHAPQSSPAIQNTVQARRVRTRVGGRDLGSIVKNGGYPAYDEPSEVAMDEEVE---FGFMAPCWRQLEMAHAFIDKDQLRYMKGLITTHVRKPMTRDQLLERADSCLQGQPEIFVAFVKTFDRISHVHAEAHLVPLYSGRKRSLSDSP 1112
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Match: D7G9E4_ECTSI (BAH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E4_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 8.340e-16 Identity = 50/134 (37.31%), Postives = 68/134 (50.75%), Query Frame = 1
Query: 1006 NDMFGMMAPCWRLLERTKAHLDKDQLVYMRGLLLTHVKKPMSRDQ-------------------------------------------------LLERAESCLQKQGHIFAAFVTVFDRIDQPPSMSLYPAKKR 1260
+ +FG MAPCW LLER +A++D DQL YM+GL+L H+++PMSRDQ LL+R +SCL +Q HI+ AFV +FD +DQ P M L+PA +R
Sbjct: 853 DQVFGFMAPCWHLLERAQAYMDPDQLSYMKGLILAHLRRPMSRDQFFEFLRGSLSLDDYGLGCACGAYTLLHFLGALTPTPPLRFSTPHFRCHKLLKRVKSCLHEQQHIYTAFVKMFDHVDQTPLMPLFPATRR 986 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig648.17421.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig648.17421.1 >prot_F-serratus_M_contig648.17421.1 ID=prot_F-serratus_M_contig648.17421.1|Name=mRNA_F-serratus_M_contig648.17421.1|organism=Fucus serratus male|type=polypeptide|length=348bp MDLAASTPFVVQVRDAGLTEGQRRSIWDRRSDTYPNRHAPRIQRSCARSIback to top mRNA from alignment at F-serratus_M_contig648:109088..113121- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig648.17421.1 ID=mRNA_F-serratus_M_contig648.17421.1|Name=mRNA_F-serratus_M_contig648.17421.1|organism=Fucus serratus male|type=mRNA|length=4034bp|location=Sequence derived from alignment at F-serratus_M_contig648:109088..113121- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig648:109088..113121- >mRNA_F-serratus_M_contig648.17421.1 ID=mRNA_F-serratus_M_contig648.17421.1|Name=mRNA_F-serratus_M_contig648.17421.1|organism=Fucus serratus male|type=CDS|length=2088bp|location=Sequence derived from alignment at F-serratus_M_contig648:109088..113121- (Fucus serratus male)back to top |