prot_F-serratus_M_contig6474.17417.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig6474.17417.1
Unique Nameprot_F-serratus_M_contig6474.17417.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length323
Homology
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: D7FZZ0_ECTSI (2'-phosphotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ0_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 5.700e-92
Identity = 170/338 (50.30%), Postives = 209/338 (61.83%), Query Frame = 0
Query:    1 MNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNNKSAPPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQENDNKYTCMQLRGGKLCRTCSMSRGKHNRPSTTGARGRVQ---WDTE------------QFAPAAVQALSLWTDGDHRVPHDPDGRPVSQVLDEFRAYVRPVRNPILTPFCTSLTGIQQ-LIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            MNR HIHFAAGLP   G++SG+R+ C+V IYVDVA AM++G+ FFRS NN   P +T  W +G  P A+ A + PRAKT+R T       + MQLRG  + R C   RGK +RP     R R +   W+ +            +F P  V          H +          +VLDEFR YVRPVR+PILTPFCTSLTGI+Q  +DG +LFEEAL +HTEF+RRNSCLPGQERSCLF+TCGNWDL+ M+P+QC+LI   VP HF +WANIK+VF        R+  R  +  K VGG       MPAMLSAL L +E R  SG DDC+N ARI   L
Sbjct:  196 MNRTHIHFAAGLPGESGVISGMRKACKVLIYVDVAAAMSDGVAFFRSTNN---PARTAPWSQGTSP-ALTALLLPRAKTLRRTSR---LTSMMQLRG--MPRRCHRGRGKEDRPRPDNVRAREKKGKWNGKANNTHPLPCAVGKFGPMEVIEFPTVLLDAHSL----------KVLDEFRVYVRPVRHPILTPFCTSLTGIEQSTVDGGVLFEEALSQHTEFLRRNSCLPGQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFNSWANIKEVFRDVMYRAARQSQRRPRGGK-VGG-------MPAMLSALGLVLEGRHHSGLDDCRNIARIAIEL 506          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A6H5L3C1_9PHAE (2'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C1_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 5.720e-75
Identity = 167/388 (43.04%), Postives = 204/388 (52.58%), Query Frame = 0
Query:    1 MNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNN---KSAPPKTLQWRRGQDPRAIEAGVDPRA-KTVRSTQE------------------------------------NDNKYTCMQLRGGKLCRTCSMSR---------GKHNR-PSTTGARGRVQWDTEQFAPAAVQALSLWT--------DGDHRVPHDPDGRPVS-------QVLDEFRAYVRPVRNPILTPFCTSLTGIQQ-LIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            MNR HIHFAAGLP A G++SG+R+ C+V IYVDVA AM +G+VFFRS NN    S    TL+ R         A VD  A KTV   +                                     ND+    M   GG    T              G+ N  P+ +G R   +  T+   P  V A+  +         DG    P +    P         +VLDEFR YVRPVR+P+LTPFCTSLTGI+Q  +DG +LFEEAL +HTEF+RRNSCLPGQERSCLF+TCGNWDL+ M+P+QC+LI   VP HF +WANIK+VF       NR+  R  +  KL          MPAMLSAL L +E R  SG DDC+N ARI   L
Sbjct:  171 MNRTHIHFAAGLPGASGVISGMRKACKVLIYVDVAAAMLDGVVFFRSSNNVILSSGKNGTLEPRYFSRVDGATATVDEDASKTVTPDKHDATPRNPTPLPPGKGDGGPTKAAASRQLRPRSGWMFNDDATAEMTCNGGGGGLTAGAXXXXXXXXAIGGRRNEAPAKSGGRDARRGATDP--PVDVYAVLDFEATCEDEKIDGGRFGPMEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPVLTPFCTSLTGIEQSTVDGGVLFEEALSQHTEFLRRNSCLPGQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFNSWANIKEVFRDEMYRANRQSQRRPRGGKLSD--------MPAMLSALGLVLEGRHHSGLDDCRNIARIAIQL 548          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A7S3Y172_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y172_HETAK)

HSP 1 Score: 122 bits (305), Expect = 4.450e-29
Identity = 68/166 (40.96%), Postives = 91/166 (54.82%), Query Frame = 0
Query:  159 QVLDEFRAYVRPVRNPILTPFCTSLTGIQQ-LIDGAILFEEALQRHTEFMRRNSCLPGQ-ERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            +V+ EF+ YVRPV +P L+ FC SLTGIQQ  +D A +F EA + H ++M     LP Q + + LF+TCG+WDL +MLPSQC L    +P + + W NIKD+F  R       G                   M  ML    L +E R  SG DDC+N AR++  L
Sbjct:  108 KVVSEFQTYVRPVHHPNLSGFCISLTGIQQEWVDQAPIFIEAFELHRQWMEVQGLLPYQGKNTILFVTCGDWDLMQMLPSQCRLTNTKIPSYLQEWVNIKDIFCQRWNLDKSMG-------------------MVGMLRKSGLRLEGRHHSGIDDCRNIARLLIQL 254          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A6J1TB80_FRAOC (ERI1 exoribonuclease 3-like isoform X1 n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TB80_FRAOC)

HSP 1 Score: 115 bits (289), Expect = 6.320e-27
Identity = 66/170 (38.82%), Postives = 95/170 (55.88%), Query Frame = 0
Query:  159 QVLDEFRAYVRPVRNPILTPFCTSLTGI-QQLIDGAILFEEALQRHTEFMR----RNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTR-FPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            + L +F  YVRPV++P+LTPFC +LTGI Q+++DG + F EAL   TEF++     ++ L G + +   +TCG+WDL KMLP+QC L G+ +P   K+W NIK  F   T  +P+                      +  ML+ L L  E R  SG DDC+N  +I+  L
Sbjct:   88 ETLGKFHIYVRPVKHPLLTPFCVNLTGISQEMVDGQLPFSEAL---TEFLKWIANSDTLLHGPQANSALVTCGDWDLLKMLPNQCALSGIPIPSEMKSWINIKKSFLHSTGLYPHG---------------------IKDMLAQLNLEHEGRLHSGIDDCRNIVKIMHGL 233          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: UPI0014036391 (ERI1 exoribonuclease 3 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014036391)

HSP 1 Score: 115 bits (289), Expect = 6.920e-27
Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 0
Query:  164 FRAYVRPVRNPILTPFCTSLTGIQQL-IDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            F  YV+PV +P+LTPFCT LTGI+QL +DG     E LQ   ++MR N  L  +  S +F+TCG+WDL+ MLP QC+ +G+ VP++FK W N+K  +           S A+      G        +P M++ L L    +  SG DDCKN A I++ L
Sbjct:  106 FHTYVQPVVHPMLTPFCTELTGIEQLKVDGKPTLPEVLQMVDDWMRENGLLDPKVNS-IFVTCGDWDLKTMLPGQCQYLGLPVPDYFKKWINLKKAY-----------SFAMGSYPANG--------LPFMINGLNLQHIGKLHSGIDDCKNIANILKEL 245          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A074ZY16_9TREM (Exonuclease domain-containing protein n=4 Tax=Opisthorchiidae TaxID=6196 RepID=A0A074ZY16_9TREM)

HSP 1 Score: 114 bits (285), Expect = 1.330e-26
Identity = 67/161 (41.61%), Postives = 87/161 (54.04%), Query Frame = 0
Query:  164 FRAYVRPVRNPILTPFCTSLTGI-QQLIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFW-VRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            F  YVRPV +P LT FCT LTGI Q ++D     EE LQ   E++ +   L G E +  F+TCG+WDLR MLPSQC  +G+ VP +FK W NIK  F  VR  FP+                      +P ML+ L L ++ R  SG DD +N A ++  L
Sbjct:   78 FHHYVRPVFHPELTDFCTELTGIIQDMVDNQPRLEEVLQLFDEWLVKEK-LTGTENTFSFVTCGDWDLRTMLPSQCRELGIPVPHYFKQWINIKQTFQDVRGLFPH---------------------SLPHMLADLNLPLQGRHHSGIDDARNIATVLCQL 216          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: UPI00155F60F2 (ERI1 exoribonuclease 3-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI00155F60F2)

HSP 1 Score: 114 bits (285), Expect = 2.290e-26
Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 0
Query:  164 FRAYVRPVRNPILTPFCTSLTGI-QQLIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            F  YV+PV NP LTPFCT LTGI Q +++G    ++ALQ   E+M + + L   + S +F+TCG+WDL+ MLP QC+ +G+ VP++FK W N+K  +           S A+      G        +PAM   L L  E R  SG DDC+N A I++ +
Sbjct:   98 FHTYVQPVYNPQLTPFCTELTGIIQSMVEGQPTLQQALQMVAEWMDKENLL-NPDVSSVFVTCGDWDLKTMLPGQCQHLGLQVPDYFKQWINLKKAY-----------SFAMGSWPKSG--------LPAMQEGLSLKQEGRLHSGIDDCRNIANIMREM 237          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A8C4WYG5_EPTBU (ERI1 exoribonuclease family member 3 n=4 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4WYG5_EPTBU)

HSP 1 Score: 114 bits (285), Expect = 2.930e-26
Identity = 64/165 (38.79%), Postives = 92/165 (55.76%), Query Frame = 0
Query:  159 QVLDEFRAYVRPVRNPILTPFCTSLTGI-QQLIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            ++   F  YV+P  +P LT FCT LTGI Q ++D    FE+ LQ+  ++M+    L  Q+R  LF+TCG+WDL+ MLP QC+ +G+ +PE+F+ W NIK  +                 A+ VG   R    + +ML  L+L    R  SG DDCKN A I++ L
Sbjct:  102 EIESMFHRYVQPTTHPELTTFCTQLTGIIQSMVDNQPTFEQVLQQAEKWMKTEGLLGSQQRF-LFVTCGDWDLKVMLPGQCKHLGLPLPEYFRNWVNIKKAY-----------------AQTVGDFPRD---LASMLKGLQLQHVGRHHSGLDDCKNIAAILREL 245          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A401S970_CHIPU (Exonuclease domain-containing protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401S970_CHIPU)

HSP 1 Score: 112 bits (279), Expect = 3.360e-26
Identity = 64/160 (40.00%), Postives = 90/160 (56.25%), Query Frame = 0
Query:  164 FRAYVRPVRNPILTPFCTSLTGI-QQLIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            F  YV+PV +  LTPFCT LTGI Q ++DG    +EALQ   ++MR+   L  +  S +F+TCG+WDL+ MLP QC+L+G+ VP++FK W N+K  +           S A+      G        +P M+  L L    +  SG DDCKN A I++ L
Sbjct:   34 FHTYVQPVVHSELTPFCTELTGIVQSMVDGKPTLQEALQMVDDWMRKEGLLDPKVNS-IFVTCGDWDLKTMLPGQCQLLGLPVPDYFKKWINLKKAY-----------SFAMGDYPKSG--------LPFMIKGLNLQHIGKLHSGIDDCKNIANIMKEL 173          
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Match: A0A1X7VTQ4_AMPQE (Exonuclease domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VTQ4_AMPQE)

HSP 1 Score: 112 bits (279), Expect = 5.930e-26
Identity = 64/160 (40.00%), Postives = 85/160 (53.12%), Query Frame = 0
Query:  164 FRAYVRPVRNPILTPFCTSLTGI-QQLIDGAILFEEALQRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFKTWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLTVEWRQDSGRDDCKNSARIVQAL 322
            F  YVRP  +P+LTPFCT LTGI Q  +DG     E L+    ++  N  L    R C F+TCG+WDL+ MLP QC+     VPE+F++W NIK VF                  +L G K +    MP ML   ++ +E R  SG DD +N A+I+  L
Sbjct:   54 FHTYVRPTSHPLLTPFCTQLTGITQSQVDGQPTLPEVLRSFHSWLETNGFLEPSVRFC-FVTCGDWDLKTMLPGQCKYFDWPVPEYFRSWMNIKFVF-----------------QRLTGVKAKG---MPHMLEYFKIPLEGRHHSGIDDSRNIAKILTRL 192          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6474.17417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZZ0_ECTSI5.700e-9250.302'-phosphotransferase n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5L3C1_9PHAE5.720e-7543.042'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S3Y172_HETAK4.450e-2940.96Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6J1TB80_FRAOC6.320e-2738.82ERI1 exoribonuclease 3-like isoform X1 n=2 Tax=Fra... [more]
UPI00140363916.920e-2740.63ERI1 exoribonuclease 3 n=1 Tax=Amblyraja radiata T... [more]
A0A074ZY16_9TREM1.330e-2641.61Exonuclease domain-containing protein n=4 Tax=Opis... [more]
UPI00155F60F22.290e-2640.00ERI1 exoribonuclease 3-like n=3 Tax=Acipenseroidei... [more]
A0A8C4WYG5_EPTBU2.930e-2638.79ERI1 exoribonuclease family member 3 n=4 Tax=Eptat... [more]
A0A401S970_CHIPU3.360e-2640.00Exonuclease domain-containing protein n=1 Tax=Chil... [more]
A0A1X7VTQ4_AMPQE5.930e-2640.00Exonuclease domain-containing protein n=1 Tax=Amph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 154..322
e-value: 2.9E-39
score: 136.8
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 161..263
e-value: 4.9E-14
score: 53.2
IPR002745Phosphotransferase KptA/Tpt1PFAMPF01885PTS_2-RNAcoord: 1..50
e-value: 5.4E-13
score: 49.4
NoneNo IPR availablePANTHERPTHR23044:SF55coord: 160..318
coord: 1..49
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 1..49
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 160..318
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..322
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..45
NoneNo IPR availableSUPERFAMILY56399ADP-ribosylationcoord: 1..50
NoneNo IPR availableTMHMMTMhelixcoord: 28..45
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 159..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6474contigF-serratus_M_contig6474:23317..31144 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6474.17417.1mRNA_F-serratus_M_contig6474.17417.1Fucus serratus malemRNAF-serratus_M_contig6474 22103..31144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig6474.17417.1 ID=prot_F-serratus_M_contig6474.17417.1|Name=mRNA_F-serratus_M_contig6474.17417.1|organism=Fucus serratus male|type=polypeptide|length=323bp
MNRMHIHFAAGLPRAKGMVSGIRRKCRVFIYVDVALAMANGIVFFRSRNN
KSAPPKTLQWRRGQDPRAIEAGVDPRAKTVRSTQENDNKYTCMQLRGGKL
CRTCSMSRGKHNRPSTTGARGRVQWDTEQFAPAAVQALSLWTDGDHRVPH
DPDGRPVSQVLDEFRAYVRPVRNPILTPFCTSLTGIQQLIDGAILFEEAL
QRHTEFMRRNSCLPGQERSCLFLTCGNWDLRKMLPSQCELIGVDVPEHFK
TWANIKDVFWVRTRFPNRRGSRALQVAKLVGGKRRQTCKMPAMLSALRLT
VEWRQDSGRDDCKNSARIVQAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR002745Ptrans_KptA/Tpt1
IPR012337RNaseH-like_sf